RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C SPA2P23201 1466 aaKnown RBP7.11□□□□□ -1.27
TRS120YDR407C TY1B-DR4Q07793 1604 aa7.09□□□□□ -1.27
TRS120YDR407C INO80P53115 1489 aa7.07□□□□□ -1.28
TRS120YDR407C SGS1P35187 1447 aa6.92□□□□□ -1.3
TRS120YDR407C TCB3Q03640 1545 aaKnown RBP6.84□□□□□ -1.31
TRS120YDR407C SSN2P38931 1420 aa6.83□□□□□ -1.32
TRS120YDR407C MON2P48563 1636 aaPredicted RBP6.75□□□□□ -1.33
TRS120YDR407C HSL1P34244 1518 aa6.7□□□□□ -1.34
TRS120YDR407C SIN3P22579 1536 aa6.69□□□□□ -1.34
TRS120YDR407C HIR3P47171 1648 aa6.59□□□□□ -1.36
TRS120YDR407C THO2P53552 1597 aaKnown RBP6.57□□□□□ -1.36
TRS120YDR407C SSK2P53599 1579 aa6.56□□□□□ -1.36
TRS120YDR407C SWR1Q05471 1514 aa6.55□□□□□ -1.36
TRS120YDR407C CHD1P32657 1468 aa6.53□□□□□ -1.36
TRS120YDR407C SPT6P23615 1451 aaKnown RBP6.49□□□□□ -1.37
TRS120YDR407C ESP1Q03018 1630 aa6.49□□□□□ -1.37
TRS120YDR407C XRN1P22147 1528 aaKnown RBP6.46□□□□□ -1.38
TRS120YDR407C REV3P14284 1504 aa6.44□□□□□ -1.38
TRS120YDR407C ATG2P53855 1592 aa6.43□□□□□ -1.38
TRS120YDR407C TY1B-DR3Q99231 1755 aa6.39□□□□□ -1.39
TRS120YDR407C SKI3P17883 1432 aaKnown RBP6.38□□□□□ -1.39
TRS120YDR407C TY2B-LR1P0C2J3 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-FP0CX63 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-GR2P0CX64 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-CP25384 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-DR2Q03494 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY1B-DR1Q03855 1755 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-DR3Q07791 1770 aaKnown RBP6.37□□□□□ -1.39
TRS120YDR407C TY2B-OR1Q12113 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-DR1Q12472 1770 aa6.37□□□□□ -1.39
TRS120YDR407C TY2B-OR2Q12501 1770 aa6.37□□□□□ -1.39
TRS120YDR407C MYO2P19524 1574 aaKnown RBP6.36□□□□□ -1.39
TRS120YDR407C PEP1P32319 1579 aa6.36□□□□□ -1.39
TRS120YDR407C TY2B-BQ12491 1770 aa6.32□□□□□ -1.4
TRS120YDR407C NUP170P38181 1502 aa6.32□□□□□ -1.4
TRS120YDR407C TY1B-HO13535 1793 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-DR5P0C2I2 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-DR6P0C2I3 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-LR2P0C2I5 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-LR3P0C2I6 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-PR1P0C2I9 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-PR2P0C2J0 1756 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-PR3P0C2J1 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-JR1P47098 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-ML2Q03434 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-ER1Q03612 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-ML1Q04711 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-GR2Q12269 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-OLQ12273 1755 aa6.29□□□□□ -1.4
TRS120YDR407C TY1B-PLQ12414 1755 aaKnown RBP6.29□□□□□ -1.4
TRS120YDR407C TY1B-BRQ12193 1756 aa6.28□□□□□ -1.4
TRS120YDR407C TY1B-GR3Q12316 1755 aa6.28□□□□□ -1.4
TRS120YDR407C TY1B-ORQ92393 1755 aa6.28□□□□□ -1.4
TRS120YDR407C ECM5Q03214 1411 aa6.26□□□□□ -1.41
TRS120YDR407C POL1P13382 1468 aa6.25□□□□□ -1.41
TRS120YDR407C YPK9Q12697 1472 aa6.24□□□□□ -1.41
TRS120YDR407C STU1P38198 1513 aa6.23□□□□□ -1.41
TRS120YDR407C MMS22Q06164 1454 aa6.2□□□□□ -1.42
TRS120YDR407C MLP2P40457 1679 aa6.16□□□□□ -1.42
TRS120YDR407C KOG1P38873 1557 aa6.16□□□□□ -1.42
TRS120YDR407C TY1B-JR2P47100 1755 aaKnown RBP6.15□□□□□ -1.42
TRS120YDR407C TY1B-ER2Q03619 1755 aa6.15□□□□□ -1.42
TRS120YDR407C TY1B-MR1Q04214 1755 aa6.15□□□□□ -1.42
TRS120YDR407C TY1B-MR2Q04670 1755 aaKnown RBP6.15□□□□□ -1.42
TRS120YDR407C TY1B-LR1Q12088 1755 aaKnown RBP6.15□□□□□ -1.42
TRS120YDR407C TY1B-NL1Q12112 1755 aa6.15□□□□□ -1.42
TRS120YDR407C TY1B-GR1Q12141 1755 aa6.15□□□□□ -1.42
TRS120YDR407C TY1B-BLQ12490 1755 aa6.15□□□□□ -1.42
TRS120YDR407C SCC2Q04002 1493 aa6.14□□□□□ -1.43
TRS120YDR407C ULS1Q08562 1619 aa6.13□□□□□ -1.43
TRS120YDR407C RPO31P04051 1460 aa6.13□□□□□ -1.43
TRS120YDR407C YOR1P53049 1477 aa6.13□□□□□ -1.43
TRS120YDR407C YCF1P39109 1515 aaKnown RBP6.13□□□□□ -1.43
TRS120YDR407C MYO4P32492 1471 aa6.12□□□□□ -1.43
TRS120YDR407C BUD4P47136 1447 aa6.11□□□□□ -1.43
TRS120YDR407C UFD4P33202 1483 aa6.11□□□□□ -1.43
TRS120YDR407C RKR1Q04781 1562 aa6.1□□□□□ -1.43
TRS120YDR407C DNA2P38859 1522 aa6.09□□□□□ -1.43
TRS120YDR407C YBT1P32386 1661 aa6.08□□□□□ -1.44
TRS120YDR407C BPT1P14772 1559 aa6.06□□□□□ -1.44
TRS120YDR407C MDS3P53094 1487 aa6.06□□□□□ -1.44
TRS120YDR407C PDR10P51533 1564 aa6.05□□□□□ -1.44
TRS120YDR407C ESC1Q03661 1658 aaKnown RBP6.05□□□□□ -1.44
TRS120YDR407C TY3B-GQ99315 1547 aa6.03□□□□□ -1.44
TRS120YDR407C SMC4Q12267 1418 aa6.02□□□□□ -1.45
TRS120YDR407C IRC20Q06554 1556 aa6.02□□□□□ -1.45
TRS120YDR407C DRS1P32892 752 aaKnown RBP6.01□□□□□ -1.45
TRS120YDR407C RPO21P04050 1733 aaKnown RBP6.01□□□□□ -1.45
TRS120YDR407C RPA190P10964 1664 aaKnown RBP5.99□□□□□ -1.45
TRS120YDR407C NTE1Q04958 1679 aa5.99□□□□□ -1.45
TRS120YDR407C TOP2P06786 1428 aaKnown RBP5.98□□□□□ -1.45
TRS120YDR407C SNQ2P32568 1501 aaKnown RBP5.94□□□□□ -1.46
TRS120YDR407C TAF2P23255 1407 aa5.94□□□□□ -1.46
TRS120YDR407C PDR5P33302 1511 aaKnown RBP5.92□□□□□ -1.46
TRS120YDR407C CDC25P04821 1589 aa5.91□□□□□ -1.46
TRS120YDR407C TRM732Q03496 1420 aa5.9□□□□□ -1.46
TRS120YDR407C YTA7P40340 1379 aa5.89□□□□□ -1.47
TRS120YDR407C PDR15Q04182 1529 aaKnown RBP5.88□□□□□ -1.47
TRS120YDR407C SNT2P53127 1403 aa5.87□□□□□ -1.47
TRS120YDR407C YRF1-1P0CX20 1796 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms