RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W PET111P08468 800 aa6.47□□□□□ -1.37
RPN7YPR108W CKA2P19454 339 aa6.47□□□□□ -1.37
RPN7YPR108W SRM1P21827 482 aa6.47□□□□□ -1.37
RPN7YPR108W PRE8P23639 250 aa6.47□□□□□ -1.37
RPN7YPR108W MSH3P25336 1018 aa6.47□□□□□ -1.37
RPN7YPR108W SPL2P38839 148 aa6.47□□□□□ -1.37
RPN7YPR108W SHC1P39000 512 aa6.47□□□□□ -1.37
RPN7YPR108W CEP3P40969 608 aa6.47□□□□□ -1.37
RPN7YPR108W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RPN7YPR108W SDA1P53313 767 aaKnown RBP6.47□□□□□ -1.37
RPN7YPR108W VIP1Q06685 1146 aaKnown RBP6.47□□□□□ -1.37
RPN7YPR108W SFI1Q12369 946 aa6.47□□□□□ -1.37
RPN7YPR108W ERG12P07277 443 aa6.46□□□□□ -1.38
RPN7YPR108W GAL2P13181 574 aa6.46□□□□□ -1.38
RPN7YPR108W OM45P16547 393 aa6.46□□□□□ -1.38
RPN7YPR108W MCM2P29469 868 aa6.46□□□□□ -1.38
RPN7YPR108W SRB4P32569 687 aa6.46□□□□□ -1.38
RPN7YPR108W MFT1P33441 392 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W CST26P38226 397 aa6.46□□□□□ -1.38
RPN7YPR108W BCD1P38772 366 aa6.46□□□□□ -1.38
RPN7YPR108W PCI8P40512 444 aa6.46□□□□□ -1.38
RPN7YPR108W MVP1P40959 511 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W DAK2P43550 591 aa6.46□□□□□ -1.38
RPN7YPR108W SOL4P53315 255 aa6.46□□□□□ -1.38
RPN7YPR108W RET3P53600 189 aa6.46□□□□□ -1.38
RPN7YPR108W YNR021WP53723 404 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W ALF1P53904 254 aa6.46□□□□□ -1.38
RPN7YPR108W VPS30Q02948 557 aa6.46□□□□□ -1.38
RPN7YPR108W VMS1Q04311 632 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W MYO5Q04439 1219 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W YLH47Q06493 454 aa6.46□□□□□ -1.38
RPN7YPR108W SUB2Q07478 446 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W SLK19Q08581 821 aaKnown RBP6.46□□□□□ -1.38
RPN7YPR108W GIN4Q12263 1142 aa6.46□□□□□ -1.38
RPN7YPR108W MAM3Q12296 706 aa6.46□□□□□ -1.38
RPN7YPR108W SMC6Q12749 1114 aa6.46□□□□□ -1.38
RPN7YPR108W TY1B-AO13527 1196 aaKnown RBP6.45□□□□□ -1.38
RPN7YPR108W SWI6P09959 803 aa6.45□□□□□ -1.38
RPN7YPR108W RGR1P19263 1082 aa6.45□□□□□ -1.38
RPN7YPR108W RET1P22276 1149 aaKnown RBP6.45□□□□□ -1.38
RPN7YPR108W MRC1P25588 1096 aa6.45□□□□□ -1.38
RPN7YPR108W CDC15P27636 974 aa6.45□□□□□ -1.38
RPN7YPR108W SMY1P32364 656 aaKnown RBP6.45□□□□□ -1.38
RPN7YPR108W NFU1P32860 256 aa6.45□□□□□ -1.38
RPN7YPR108W RPT3P33298 428 aaKnown RBP6.45□□□□□ -1.38
RPN7YPR108W VPS35P34110 944 aa6.45□□□□□ -1.38
RPN7YPR108W YKR018CP36114 725 aa6.45□□□□□ -1.38
RPN7YPR108W SPT8P38915 602 aa6.45□□□□□ -1.38
RPN7YPR108W NDC80P40460 691 aa6.45□□□□□ -1.38
RPN7YPR108W CTH1P47976 325 aa6.45□□□□□ -1.38
RPN7YPR108W YGL138CP53122 345 aa6.45□□□□□ -1.38
RPN7YPR108W CNM67P53865 581 aaKnown RBP6.45□□□□□ -1.38
RPN7YPR108W MDM1Q01846 1127 aa6.45□□□□□ -1.38
RPN7YPR108W YLR287CQ05881 355 aa6.45□□□□□ -1.38
RPN7YPR108W DSE3Q08729 430 aa6.45□□□□□ -1.38
RPN7YPR108W TFB4Q12004 338 aa6.45□□□□□ -1.38
RPN7YPR108W DCS2Q12123 353 aa6.45□□□□□ -1.38
RPN7YPR108W MET6P05694 767 aaKnown RBP6.44□□□□□ -1.38
RPN7YPR108W SNF3P10870 884 aa6.44□□□□□ -1.38
RPN7YPR108W HIR1P32479 840 aa6.44□□□□□ -1.38
RPN7YPR108W YKL023WP36103 277 aaKnown RBP6.44□□□□□ -1.38
RPN7YPR108W BYE1P36106 594 aa6.44□□□□□ -1.38
RPN7YPR108W TPS3P38426 1054 aaKnown RBP6.44□□□□□ -1.38
RPN7YPR108W CTM1P38818 585 aa6.44□□□□□ -1.38
RPN7YPR108W VID30P53076 958 aa6.44□□□□□ -1.38
RPN7YPR108W RNT1Q02555 471 aa6.44□□□□□ -1.38
RPN7YPR108W VPS38Q05919 439 aa6.44□□□□□ -1.38
RPN7YPR108W TSR1Q07381 788 aaKnown RBP6.44□□□□□ -1.38
RPN7YPR108W TLG2Q08144 397 aa6.44□□□□□ -1.38
RPN7YPR108W YOR111WQ99210 232 aa6.44□□□□□ -1.38
RPN7YPR108W NUC1P08466 329 aa6.43□□□□□ -1.38
RPN7YPR108W MAK16P10962 306 aaPredicted RBP6.43□□□□□ -1.38
RPN7YPR108W GSY1P23337 708 aa6.43□□□□□ -1.38
RPN7YPR108W AIR1P40507 360 aaKnown RBP6.43□□□□□ -1.38
RPN7YPR108W GSM1P42950 618 aa6.43□□□□□ -1.38
RPN7YPR108W DSE4P53753 1117 aa6.43□□□□□ -1.38
RPN7YPR108W MFM1Q02783 413 aa6.43□□□□□ -1.38
RPN7YPR108W WAR1Q03631 944 aa6.43□□□□□ -1.38
RPN7YPR108W BUL2Q03758 920 aaKnown RBP6.43□□□□□ -1.38
RPN7YPR108W TRS120Q04183 1289 aa6.43□□□□□ -1.38
RPN7YPR108W COG4Q06096 861 aa6.43□□□□□ -1.38
RPN7YPR108W SMD2Q06217 110 aaKnown RBP6.43□□□□□ -1.38
RPN7YPR108W YEL077CQ3E7X8 1277 aa6.43□□□□□ -1.38
RPN7YPR108W PMA1P05030 918 aaKnown RBP6.42□□□□□ -1.38
RPN7YPR108W RPC53P25441 422 aa6.42□□□□□ -1.38
RPN7YPR108W GLC3P32775 704 aa6.42□□□□□ -1.38
RPN7YPR108W YBL028CP38202 106 aa6.42□□□□□ -1.38
RPN7YPR108W STT3P39007 718 aaKnown RBP6.42□□□□□ -1.38
RPN7YPR108W FYV10P40492 516 aa6.42□□□□□ -1.38
RPN7YPR108W ROG3P43602 733 aa6.42□□□□□ -1.38
RPN7YPR108W STR2P47164 639 aa6.42□□□□□ -1.38
RPN7YPR108W FPK1P53739 893 aa6.42□□□□□ -1.38
RPN7YPR108W GIR2Q03768 265 aaPredicted RBP6.42□□□□□ -1.38
RPN7YPR108W YPR109WQ06104 294 aa6.42□□□□□ -1.38
RPN7YPR108W SKG3Q06315 1026 aa6.42□□□□□ -1.38
RPN7YPR108W SPP382Q06411 708 aaPredicted RBP6.42□□□□□ -1.38
RPN7YPR108W YDL124WQ07551 312 aaKnown RBP6.42□□□□□ -1.38
RPN7YPR108W TUF1P02992 437 aaKnown RBP6.41□□□□□ -1.38
RPN7YPR108W TOP1P04786 769 aa6.41□□□□□ -1.38
RPN7YPR108W CHO2P05374 869 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms