Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.94■■■■□ 3.18
PCDHGA2Q9Y5H1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
PCDHGA2Q9Y5H1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.49■■■■□ 3.11
PCDHGA2Q9Y5H1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
PCDHGA2Q9Y5H1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
PCDHGA2Q9Y5H1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.38■■■□□ 2.93
PCDHGA2Q9Y5H1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
PCDHGA2Q9Y5H1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.3■■■□□ 2.92
PCDHGA2Q9Y5H1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
PCDHGA2Q9Y5H1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PCDHGA2Q9Y5H1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PCDHGA2Q9Y5H1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.93■■■□□ 2.86
PCDHGA2Q9Y5H1 AL356512.1-201ENST00000607453 1739 ntBASIC32.88■■■□□ 2.85
PCDHGA2Q9Y5H1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.86■■■□□ 2.85
PCDHGA2Q9Y5H1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PCDHGA2Q9Y5H1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PCDHGA2Q9Y5H1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
PCDHGA2Q9Y5H1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
PCDHGA2Q9Y5H1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCDHGA2Q9Y5H1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
PCDHGA2Q9Y5H1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCDHGA2Q9Y5H1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PCDHGA2Q9Y5H1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.29■■■□□ 2.76
PCDHGA2Q9Y5H1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHGA2Q9Y5H1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHGA2Q9Y5H1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHGA2Q9Y5H1 ZNRF2P1-201ENST00000441407 443 ntBASIC31.99■■■□□ 2.71
PCDHGA2Q9Y5H1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.98■■■□□ 2.71
PCDHGA2Q9Y5H1 AC006077.2-201ENST00000623591 457 ntBASIC31.96■■■□□ 2.71
PCDHGA2Q9Y5H1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.81■■■□□ 2.68
PCDHGA2Q9Y5H1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
PCDHGA2Q9Y5H1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PCDHGA2Q9Y5H1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.62■■■□□ 2.65
PCDHGA2Q9Y5H1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHGA2Q9Y5H1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.49■■■□□ 2.63
PCDHGA2Q9Y5H1 AC015813.7-201ENST00000623294 581 ntBASIC31.48■■■□□ 2.63
PCDHGA2Q9Y5H1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCDHGA2Q9Y5H1 AP002365.1-201ENST00000603448 772 ntBASIC31.16■■■□□ 2.58
PCDHGA2Q9Y5H1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.12■■■□□ 2.57
PCDHGA2Q9Y5H1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHGA2Q9Y5H1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.05■■■□□ 2.56
PCDHGA2Q9Y5H1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
PCDHGA2Q9Y5H1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHGA2Q9Y5H1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHGA2Q9Y5H1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.92■■■□□ 2.54
PCDHGA2Q9Y5H1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHGA2Q9Y5H1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.91■■■□□ 2.54
PCDHGA2Q9Y5H1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHGA2Q9Y5H1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.85■■■□□ 2.53
PCDHGA2Q9Y5H1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.85■■■□□ 2.53
PCDHGA2Q9Y5H1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHGA2Q9Y5H1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.72■■■□□ 2.51
PCDHGA2Q9Y5H1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.72■■■□□ 2.51
PCDHGA2Q9Y5H1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.68■■■□□ 2.5
PCDHGA2Q9Y5H1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.68■■■□□ 2.5
PCDHGA2Q9Y5H1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.68■■■□□ 2.5
PCDHGA2Q9Y5H1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHGA2Q9Y5H1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHGA2Q9Y5H1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
PCDHGA2Q9Y5H1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHGA2Q9Y5H1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
PCDHGA2Q9Y5H1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
PCDHGA2Q9Y5H1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.57■■■□□ 2.48
PCDHGA2Q9Y5H1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.56■■■□□ 2.48
PCDHGA2Q9Y5H1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
PCDHGA2Q9Y5H1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHGA2Q9Y5H1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
PCDHGA2Q9Y5H1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.39■■■□□ 2.46
PCDHGA2Q9Y5H1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCDHGA2Q9Y5H1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHGA2Q9Y5H1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.33■■■□□ 2.45
PCDHGA2Q9Y5H1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHGA2Q9Y5H1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.26■■■□□ 2.43
PCDHGA2Q9Y5H1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.25■■■□□ 2.43
PCDHGA2Q9Y5H1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHGA2Q9Y5H1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHGA2Q9Y5H1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHGA2Q9Y5H1 DYNLL1-208ENST00000550178 581 ntBASIC30.19■■■□□ 2.42
PCDHGA2Q9Y5H1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHGA2Q9Y5H1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHGA2Q9Y5H1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHGA2Q9Y5H1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHGA2Q9Y5H1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHGA2Q9Y5H1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.06■■■□□ 2.4
PCDHGA2Q9Y5H1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.06■■■□□ 2.4
PCDHGA2Q9Y5H1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHGA2Q9Y5H1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDHGA2Q9Y5H1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
PCDHGA2Q9Y5H1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCDHGA2Q9Y5H1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
PCDHGA2Q9Y5H1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
PCDHGA2Q9Y5H1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.98■■■□□ 2.39
PCDHGA2Q9Y5H1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.96■■■□□ 2.39
PCDHGA2Q9Y5H1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.95■■■□□ 2.39
PCDHGA2Q9Y5H1 AL031258.1-201ENST00000623562 325 ntBASIC29.95■■■□□ 2.39
PCDHGA2Q9Y5H1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.94■■■□□ 2.38
PCDHGA2Q9Y5H1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
PCDHGA2Q9Y5H1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHGA2Q9Y5H1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHGA2Q9Y5H1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms