Protein–RNA interactions for Protein: Q9Y5F8

PCDHGB7, Protocadherin gamma-B7, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7Q9Y5F8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PCDHGB7Q9Y5F8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.57■■■□□ 2.64
PCDHGB7Q9Y5F8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PCDHGB7Q9Y5F8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHGB7Q9Y5F8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHGB7Q9Y5F8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
PCDHGB7Q9Y5F8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHGB7Q9Y5F8 AL356512.1-201ENST00000607453 1739 ntBASIC30.3■■■□□ 2.44
PCDHGB7Q9Y5F8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
PCDHGB7Q9Y5F8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.07■■■□□ 2.4
PCDHGB7Q9Y5F8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHGB7Q9Y5F8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.87■■■□□ 2.37
PCDHGB7Q9Y5F8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHGB7Q9Y5F8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHGB7Q9Y5F8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
PCDHGB7Q9Y5F8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHGB7Q9Y5F8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
PCDHGB7Q9Y5F8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHGB7Q9Y5F8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.58■■■□□ 2.33
PCDHGB7Q9Y5F8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHGB7Q9Y5F8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHGB7Q9Y5F8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHGB7Q9Y5F8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDHGB7Q9Y5F8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
PCDHGB7Q9Y5F8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGB7Q9Y5F8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGB7Q9Y5F8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.14■■■□□ 2.26
PCDHGB7Q9Y5F8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHGB7Q9Y5F8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
PCDHGB7Q9Y5F8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHGB7Q9Y5F8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.98■■■□□ 2.23
PCDHGB7Q9Y5F8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.9■■■□□ 2.22
PCDHGB7Q9Y5F8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.88■■■□□ 2.21
PCDHGB7Q9Y5F8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGB7Q9Y5F8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
PCDHGB7Q9Y5F8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHGB7Q9Y5F8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
PCDHGB7Q9Y5F8 AC006077.2-201ENST00000623591 457 ntBASIC28.75■■■□□ 2.19
PCDHGB7Q9Y5F8 ZNRF2P1-201ENST00000441407 443 ntBASIC28.7■■■□□ 2.18
PCDHGB7Q9Y5F8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHGB7Q9Y5F8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.62■■■□□ 2.17
PCDHGB7Q9Y5F8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.58■■■□□ 2.17
PCDHGB7Q9Y5F8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHGB7Q9Y5F8 AC015813.7-201ENST00000623294 581 ntBASIC28.54■■■□□ 2.16
PCDHGB7Q9Y5F8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHGB7Q9Y5F8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.35■■■□□ 2.13
PCDHGB7Q9Y5F8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.25■■■□□ 2.11
PCDHGB7Q9Y5F8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHGB7Q9Y5F8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
PCDHGB7Q9Y5F8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHGB7Q9Y5F8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHGB7Q9Y5F8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHGB7Q9Y5F8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHGB7Q9Y5F8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHGB7Q9Y5F8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGB7Q9Y5F8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
PCDHGB7Q9Y5F8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGB7Q9Y5F8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
PCDHGB7Q9Y5F8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGB7Q9Y5F8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHGB7Q9Y5F8 AP002365.1-201ENST00000603448 772 ntBASIC27.95■■■□□ 2.06
PCDHGB7Q9Y5F8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHGB7Q9Y5F8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.91■■■□□ 2.06
PCDHGB7Q9Y5F8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHGB7Q9Y5F8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHGB7Q9Y5F8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.72■■■□□ 2.03
PCDHGB7Q9Y5F8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGB7Q9Y5F8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGB7Q9Y5F8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGB7Q9Y5F8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.68■■■□□ 2.02
PCDHGB7Q9Y5F8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.67■■■□□ 2.02
PCDHGB7Q9Y5F8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHGB7Q9Y5F8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGB7Q9Y5F8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
PCDHGB7Q9Y5F8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHGB7Q9Y5F8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.59■■■□□ 2.01
PCDHGB7Q9Y5F8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.57■■■□□ 2
PCDHGB7Q9Y5F8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.55■■■□□ 2
PCDHGB7Q9Y5F8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.54■■■□□ 2
PCDHGB7Q9Y5F8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGB7Q9Y5F8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHGB7Q9Y5F8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
PCDHGB7Q9Y5F8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCDHGB7Q9Y5F8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCDHGB7Q9Y5F8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHGB7Q9Y5F8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
PCDHGB7Q9Y5F8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHGB7Q9Y5F8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGB7Q9Y5F8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGB7Q9Y5F8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHGB7Q9Y5F8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGB7Q9Y5F8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
PCDHGB7Q9Y5F8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
PCDHGB7Q9Y5F8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHGB7Q9Y5F8 DYNLL1-208ENST00000550178 581 ntBASIC27.26■■□□□ 1.95
PCDHGB7Q9Y5F8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGB7Q9Y5F8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGB7Q9Y5F8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.23■■□□□ 1.95
PCDHGB7Q9Y5F8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGB7Q9Y5F8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms