Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.82■■■■□ 3.48
BRWD1Q9NSI6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.53■■■■□ 3.44
BRWD1Q9NSI6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.42■■■■□ 3.42
BRWD1Q9NSI6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
BRWD1Q9NSI6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
BRWD1Q9NSI6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.23
BRWD1Q9NSI6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
BRWD1Q9NSI6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.1■■■■□ 3.21
BRWD1Q9NSI6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
BRWD1Q9NSI6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.05■■■■□ 3.2
BRWD1Q9NSI6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
BRWD1Q9NSI6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.87■■■■□ 3.17
BRWD1Q9NSI6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
BRWD1Q9NSI6 AL356512.1-201ENST00000607453 1739 ntBASIC34.67■■■■□ 3.14
BRWD1Q9NSI6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
BRWD1Q9NSI6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.59■■■■□ 3.13
BRWD1Q9NSI6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
BRWD1Q9NSI6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.22■■■■□ 3.07
BRWD1Q9NSI6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.19■■■■□ 3.06
BRWD1Q9NSI6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
BRWD1Q9NSI6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
BRWD1Q9NSI6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
BRWD1Q9NSI6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.95■■■■□ 3.02
BRWD1Q9NSI6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.91■■■■□ 3.02
BRWD1Q9NSI6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
BRWD1Q9NSI6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.78■■■■□ 3
BRWD1Q9NSI6 AC006077.2-201ENST00000623591 457 ntBASIC33.75■■■□□ 2.99
BRWD1Q9NSI6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.73■■■□□ 2.99
BRWD1Q9NSI6 ZNRF2P1-201ENST00000441407 443 ntBASIC33.71■■■□□ 2.99
BRWD1Q9NSI6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
BRWD1Q9NSI6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.51■■■□□ 2.95
BRWD1Q9NSI6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
BRWD1Q9NSI6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.3■■■□□ 2.92
BRWD1Q9NSI6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
BRWD1Q9NSI6 AC015813.7-201ENST00000623294 581 ntBASIC33.11■■■□□ 2.89
BRWD1Q9NSI6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
BRWD1Q9NSI6 AP002365.1-201ENST00000603448 772 ntBASIC32.97■■■□□ 2.87
BRWD1Q9NSI6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.96■■■□□ 2.87
BRWD1Q9NSI6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.87■■■□□ 2.85
BRWD1Q9NSI6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.85■■■□□ 2.85
BRWD1Q9NSI6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
BRWD1Q9NSI6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
BRWD1Q9NSI6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.71■■■□□ 2.83
BRWD1Q9NSI6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.68■■■□□ 2.82
BRWD1Q9NSI6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
BRWD1Q9NSI6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
BRWD1Q9NSI6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.58■■■□□ 2.81
BRWD1Q9NSI6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.56■■■□□ 2.8
BRWD1Q9NSI6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
BRWD1Q9NSI6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
BRWD1Q9NSI6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.48■■■□□ 2.79
BRWD1Q9NSI6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.48■■■□□ 2.79
BRWD1Q9NSI6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.44■■■□□ 2.78
BRWD1Q9NSI6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.43■■■□□ 2.78
BRWD1Q9NSI6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
BRWD1Q9NSI6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.37■■■□□ 2.77
BRWD1Q9NSI6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
BRWD1Q9NSI6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
BRWD1Q9NSI6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
BRWD1Q9NSI6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.26■■■□□ 2.75
BRWD1Q9NSI6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
BRWD1Q9NSI6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
BRWD1Q9NSI6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
BRWD1Q9NSI6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
BRWD1Q9NSI6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.17■■■□□ 2.74
BRWD1Q9NSI6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
BRWD1Q9NSI6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
BRWD1Q9NSI6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
BRWD1Q9NSI6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
BRWD1Q9NSI6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.99■■■□□ 2.71
BRWD1Q9NSI6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BRWD1Q9NSI6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.92■■■□□ 2.7
BRWD1Q9NSI6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
BRWD1Q9NSI6 DYNLL1-208ENST00000550178 581 ntBASIC31.9■■■□□ 2.7
BRWD1Q9NSI6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
BRWD1Q9NSI6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
BRWD1Q9NSI6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
BRWD1Q9NSI6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.81■■■□□ 2.68
BRWD1Q9NSI6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.8■■■□□ 2.68
BRWD1Q9NSI6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.8■■■□□ 2.68
BRWD1Q9NSI6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
BRWD1Q9NSI6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
BRWD1Q9NSI6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
BRWD1Q9NSI6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
BRWD1Q9NSI6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.69■■■□□ 2.66
BRWD1Q9NSI6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
BRWD1Q9NSI6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
BRWD1Q9NSI6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.63■■■□□ 2.65
BRWD1Q9NSI6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.6■■■□□ 2.65
BRWD1Q9NSI6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
BRWD1Q9NSI6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
BRWD1Q9NSI6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BRWD1Q9NSI6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
BRWD1Q9NSI6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.57■■■□□ 2.64
BRWD1Q9NSI6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
BRWD1Q9NSI6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.55■■■□□ 2.64
BRWD1Q9NSI6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BRWD1Q9NSI6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
BRWD1Q9NSI6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.51■■■□□ 2.63
BRWD1Q9NSI6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms