Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC40.01■■■■■ 4
EFCC1Q9HA90 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.89■■■■□ 3.98
EFCC1Q9HA90 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC39.54■■■■□ 3.92
EFCC1Q9HA90 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
EFCC1Q9HA90 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
EFCC1Q9HA90 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
EFCC1Q9HA90 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC38.31■■■■□ 3.72
EFCC1Q9HA90 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.27■■■■□ 3.72
EFCC1Q9HA90 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
EFCC1Q9HA90 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC38.16■■■■□ 3.7
EFCC1Q9HA90 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
EFCC1Q9HA90 AL356512.1-201ENST00000607453 1739 ntBASIC38.09■■■■□ 3.69
EFCC1Q9HA90 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
EFCC1Q9HA90 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.75■■■■□ 3.63
EFCC1Q9HA90 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.67■■■■□ 3.62
EFCC1Q9HA90 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
EFCC1Q9HA90 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC37.18■■■■□ 3.54
EFCC1Q9HA90 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC37.18■■■■□ 3.54
EFCC1Q9HA90 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC37.15■■■■□ 3.54
EFCC1Q9HA90 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.13■■■■□ 3.53
EFCC1Q9HA90 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC37.12■■■■□ 3.53
EFCC1Q9HA90 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
EFCC1Q9HA90 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
EFCC1Q9HA90 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
EFCC1Q9HA90 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC37.03■■■■□ 3.52
EFCC1Q9HA90 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
EFCC1Q9HA90 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.74■■■■□ 3.47
EFCC1Q9HA90 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.71■■■■□ 3.47
EFCC1Q9HA90 ZNRF2P1-201ENST00000441407 443 ntBASIC36.68■■■■□ 3.46
EFCC1Q9HA90 AC006077.2-201ENST00000623591 457 ntBASIC36.62■■■■□ 3.45
EFCC1Q9HA90 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.53■■■■□ 3.44
EFCC1Q9HA90 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.5■■■■□ 3.43
EFCC1Q9HA90 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC36.47■■■■□ 3.43
EFCC1Q9HA90 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC36.42■■■■□ 3.42
EFCC1Q9HA90 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
EFCC1Q9HA90 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC36.29■■■■□ 3.4
EFCC1Q9HA90 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC36.24■■■■□ 3.39
EFCC1Q9HA90 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
EFCC1Q9HA90 AC015813.7-201ENST00000623294 581 ntBASIC36.09■■■■□ 3.37
EFCC1Q9HA90 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
EFCC1Q9HA90 AP002365.1-201ENST00000603448 772 ntBASIC35.74■■■■□ 3.31
EFCC1Q9HA90 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
EFCC1Q9HA90 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
EFCC1Q9HA90 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.53■■■■□ 3.28
EFCC1Q9HA90 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC35.51■■■■□ 3.28
EFCC1Q9HA90 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
EFCC1Q9HA90 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
EFCC1Q9HA90 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC35.43■■■■□ 3.26
EFCC1Q9HA90 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC35.42■■■■□ 3.26
EFCC1Q9HA90 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
EFCC1Q9HA90 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC35.27■■■■□ 3.24
EFCC1Q9HA90 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
EFCC1Q9HA90 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC35.25■■■■□ 3.23
EFCC1Q9HA90 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC35.25■■■■□ 3.23
EFCC1Q9HA90 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
EFCC1Q9HA90 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC35.18■■■■□ 3.22
EFCC1Q9HA90 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.18■■■■□ 3.22
EFCC1Q9HA90 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
EFCC1Q9HA90 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC35.13■■■■□ 3.21
EFCC1Q9HA90 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.13■■■■□ 3.21
EFCC1Q9HA90 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
EFCC1Q9HA90 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
EFCC1Q9HA90 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
EFCC1Q9HA90 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
EFCC1Q9HA90 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC35.03■■■■□ 3.2
EFCC1Q9HA90 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
EFCC1Q9HA90 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
EFCC1Q9HA90 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.91■■■■□ 3.18
EFCC1Q9HA90 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC34.84■■■■□ 3.17
EFCC1Q9HA90 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
EFCC1Q9HA90 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.8■■■■□ 3.16
EFCC1Q9HA90 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC34.79■■■■□ 3.16
EFCC1Q9HA90 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
EFCC1Q9HA90 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
EFCC1Q9HA90 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
EFCC1Q9HA90 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
EFCC1Q9HA90 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.66■■■■□ 3.14
EFCC1Q9HA90 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
EFCC1Q9HA90 DYNLL1-208ENST00000550178 581 ntBASIC34.65■■■■□ 3.14
EFCC1Q9HA90 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
EFCC1Q9HA90 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
EFCC1Q9HA90 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
EFCC1Q9HA90 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
EFCC1Q9HA90 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
EFCC1Q9HA90 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.51■■■■□ 3.12
EFCC1Q9HA90 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
EFCC1Q9HA90 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC34.49■■■■□ 3.11
EFCC1Q9HA90 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.43■■■■□ 3.1
EFCC1Q9HA90 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
EFCC1Q9HA90 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.41■■■■□ 3.1
EFCC1Q9HA90 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.4■■■■□ 3.1
EFCC1Q9HA90 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.4■■■■□ 3.1
EFCC1Q9HA90 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC34.39■■■■□ 3.1
EFCC1Q9HA90 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
EFCC1Q9HA90 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.37■■■■□ 3.09
EFCC1Q9HA90 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
EFCC1Q9HA90 AL031258.1-201ENST00000623562 325 ntBASIC34.36■■■■□ 3.09
EFCC1Q9HA90 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
EFCC1Q9HA90 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.33■■■■□ 3.09
EFCC1Q9HA90 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC34.32■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms