Protein–RNA interactions for Protein: Q8TDX9

PKD1L1, Polycystic kidney disease protein 1-like 1, humanhuman

Predictions only

Length 2,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L1Q8TDX9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.72■■□□□ 1.87
PKD1L1Q8TDX9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
PKD1L1Q8TDX9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
PKD1L1Q8TDX9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PKD1L1Q8TDX9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PKD1L1Q8TDX9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PKD1L1Q8TDX9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PKD1L1Q8TDX9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PKD1L1Q8TDX9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
PKD1L1Q8TDX9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PKD1L1Q8TDX9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.42■■□□□ 1.66
PKD1L1Q8TDX9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PKD1L1Q8TDX9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.33■■□□□ 1.65
PKD1L1Q8TDX9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PKD1L1Q8TDX9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.2■■□□□ 1.62
PKD1L1Q8TDX9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PKD1L1Q8TDX9 AL356512.1-201ENST00000607453 1739 ntBASIC25.04■■□□□ 1.6
PKD1L1Q8TDX9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PKD1L1Q8TDX9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
PKD1L1Q8TDX9 AC006077.2-201ENST00000623591 457 ntBASIC24.78■■□□□ 1.56
PKD1L1Q8TDX9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
PKD1L1Q8TDX9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PKD1L1Q8TDX9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PKD1L1Q8TDX9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PKD1L1Q8TDX9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.61■■□□□ 1.53
PKD1L1Q8TDX9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.61■■□□□ 1.53
PKD1L1Q8TDX9 ZNRF2P1-201ENST00000441407 443 ntBASIC24.5■■□□□ 1.51
PKD1L1Q8TDX9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PKD1L1Q8TDX9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
PKD1L1Q8TDX9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PKD1L1Q8TDX9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.34■■□□□ 1.49
PKD1L1Q8TDX9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PKD1L1Q8TDX9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.2■■□□□ 1.46
PKD1L1Q8TDX9 AC015813.7-201ENST00000623294 581 ntBASIC24.06■■□□□ 1.44
PKD1L1Q8TDX9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PKD1L1Q8TDX9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
PKD1L1Q8TDX9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
PKD1L1Q8TDX9 AP002365.1-201ENST00000603448 772 ntBASIC23.93■■□□□ 1.42
PKD1L1Q8TDX9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
PKD1L1Q8TDX9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.85■■□□□ 1.41
PKD1L1Q8TDX9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PKD1L1Q8TDX9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PKD1L1Q8TDX9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.75■■□□□ 1.39
PKD1L1Q8TDX9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PKD1L1Q8TDX9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PKD1L1Q8TDX9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PKD1L1Q8TDX9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.68■■□□□ 1.38
PKD1L1Q8TDX9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.67■■□□□ 1.38
PKD1L1Q8TDX9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
PKD1L1Q8TDX9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.66■■□□□ 1.38
PKD1L1Q8TDX9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PKD1L1Q8TDX9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.61■■□□□ 1.37
PKD1L1Q8TDX9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PKD1L1Q8TDX9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.55■■□□□ 1.36
PKD1L1Q8TDX9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23.54■■□□□ 1.36
PKD1L1Q8TDX9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PKD1L1Q8TDX9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PKD1L1Q8TDX9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PKD1L1Q8TDX9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PKD1L1Q8TDX9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
PKD1L1Q8TDX9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.45■■□□□ 1.34
PKD1L1Q8TDX9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.43■■□□□ 1.34
PKD1L1Q8TDX9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.42■■□□□ 1.34
PKD1L1Q8TDX9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PKD1L1Q8TDX9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PKD1L1Q8TDX9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PKD1L1Q8TDX9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PKD1L1Q8TDX9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.31■■□□□ 1.32
PKD1L1Q8TDX9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.29■■□□□ 1.32
PKD1L1Q8TDX9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PKD1L1Q8TDX9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PKD1L1Q8TDX9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.25■■□□□ 1.31
PKD1L1Q8TDX9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PKD1L1Q8TDX9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PKD1L1Q8TDX9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.19■■□□□ 1.3
PKD1L1Q8TDX9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PKD1L1Q8TDX9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.18■■□□□ 1.3
PKD1L1Q8TDX9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PKD1L1Q8TDX9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.14■■□□□ 1.3
PKD1L1Q8TDX9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PKD1L1Q8TDX9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PKD1L1Q8TDX9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PKD1L1Q8TDX9 DYNLL1-208ENST00000550178 581 ntBASIC23.12■■□□□ 1.29
PKD1L1Q8TDX9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.09■■□□□ 1.29
PKD1L1Q8TDX9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PKD1L1Q8TDX9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.06■■□□□ 1.28
PKD1L1Q8TDX9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PKD1L1Q8TDX9 RARRES2P7-201ENST00000567349 469 ntBASIC23.04■■□□□ 1.28
PKD1L1Q8TDX9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.04■■□□□ 1.28
PKD1L1Q8TDX9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.02■■□□□ 1.28
PKD1L1Q8TDX9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PKD1L1Q8TDX9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PKD1L1Q8TDX9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23■■□□□ 1.27
PKD1L1Q8TDX9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PKD1L1Q8TDX9 RPS2P35-201ENST00000443417 897 ntBASIC22.95■■□□□ 1.26
PKD1L1Q8TDX9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.92■■□□□ 1.26
PKD1L1Q8TDX9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PKD1L1Q8TDX9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PKD1L1Q8TDX9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PKD1L1Q8TDX9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms