Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.92■■■■□ 3.82
RNF180Q86T96 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.64■■■■□ 3.78
RNF180Q86T96 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.09■■■■□ 3.69
RNF180Q86T96 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
RNF180Q86T96 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
RNF180Q86T96 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.38■■■■□ 3.58
RNF180Q86T96 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
RNF180Q86T96 AL356512.1-201ENST00000607453 1739 ntBASIC37.06■■■■□ 3.52
RNF180Q86T96 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC37■■■■□ 3.51
RNF180Q86T96 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.86■■■■□ 3.49
RNF180Q86T96 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.7■■■■□ 3.47
RNF180Q86T96 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.6■■■■□ 3.45
RNF180Q86T96 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.6■■■■□ 3.45
RNF180Q86T96 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
RNF180Q86T96 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.31■■■■□ 3.4
RNF180Q86T96 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
RNF180Q86T96 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.21■■■■□ 3.39
RNF180Q86T96 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.16■■■■□ 3.38
RNF180Q86T96 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
RNF180Q86T96 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
RNF180Q86T96 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
RNF180Q86T96 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
RNF180Q86T96 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.76■■■■□ 3.32
RNF180Q86T96 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.7■■■■□ 3.31
RNF180Q86T96 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
RNF180Q86T96 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
RNF180Q86T96 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
RNF180Q86T96 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.49■■■■□ 3.27
RNF180Q86T96 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
RNF180Q86T96 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
RNF180Q86T96 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.39■■■■□ 3.26
RNF180Q86T96 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.27■■■■□ 3.24
RNF180Q86T96 AC006077.2-201ENST00000623591 457 ntBASIC35.2■■■■□ 3.23
RNF180Q86T96 ZNRF2P1-201ENST00000441407 443 ntBASIC35.19■■■■□ 3.22
RNF180Q86T96 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.13■■■■□ 3.21
RNF180Q86T96 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35■■■■□ 3.19
RNF180Q86T96 AC015813.7-201ENST00000623294 581 ntBASIC34.96■■■■□ 3.19
RNF180Q86T96 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
RNF180Q86T96 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
RNF180Q86T96 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
RNF180Q86T96 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.63■■■■□ 3.13
RNF180Q86T96 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.4■■■■□ 3.1
RNF180Q86T96 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
RNF180Q86T96 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
RNF180Q86T96 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
RNF180Q86T96 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
RNF180Q86T96 AP002365.1-201ENST00000603448 772 ntBASIC34.3■■■■□ 3.08
RNF180Q86T96 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.22■■■■□ 3.07
RNF180Q86T96 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
RNF180Q86T96 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
RNF180Q86T96 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.04■■■■□ 3.04
RNF180Q86T96 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
RNF180Q86T96 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.03■■■■□ 3.04
RNF180Q86T96 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
RNF180Q86T96 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.01■■■■□ 3.03
RNF180Q86T96 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34■■■■□ 3.03
RNF180Q86T96 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.99■■■■□ 3.03
RNF180Q86T96 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
RNF180Q86T96 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
RNF180Q86T96 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.9■■■■□ 3.02
RNF180Q86T96 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.89■■■■□ 3.02
RNF180Q86T96 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.86■■■■□ 3.01
RNF180Q86T96 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.84■■■■□ 3.01
RNF180Q86T96 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.82■■■■□ 3
RNF180Q86T96 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.79■■■■□ 3
RNF180Q86T96 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
RNF180Q86T96 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.71■■■□□ 2.99
RNF180Q86T96 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
RNF180Q86T96 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
RNF180Q86T96 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
RNF180Q86T96 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.61■■■□□ 2.97
RNF180Q86T96 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
RNF180Q86T96 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
RNF180Q86T96 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.57■■■□□ 2.96
RNF180Q86T96 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
RNF180Q86T96 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.95
RNF180Q86T96 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.49■■■□□ 2.95
RNF180Q86T96 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.48■■■□□ 2.95
RNF180Q86T96 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RNF180Q86T96 DYNLL1-208ENST00000550178 581 ntBASIC33.48■■■□□ 2.95
RNF180Q86T96 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RNF180Q86T96 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
RNF180Q86T96 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
RNF180Q86T96 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
RNF180Q86T96 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.34■■■□□ 2.93
RNF180Q86T96 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.33■■■□□ 2.93
RNF180Q86T96 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.32■■■□□ 2.92
RNF180Q86T96 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RNF180Q86T96 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
RNF180Q86T96 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.24■■■□□ 2.91
RNF180Q86T96 AL031258.1-201ENST00000623562 325 ntBASIC33.21■■■□□ 2.91
RNF180Q86T96 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RNF180Q86T96 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.17■■■□□ 2.9
RNF180Q86T96 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
RNF180Q86T96 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
RNF180Q86T96 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RNF180Q86T96 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
RNF180Q86T96 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.08■■■□□ 2.89
RNF180Q86T96 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.08■■■□□ 2.89
RNF180Q86T96 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms