Protein–RNA interactions for Protein: Q70CQ2

USP34, Ubiquitin carboxyl-terminal hydrolase 34, humanhuman

Predictions only

Length 3,546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP34Q70CQ2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.97■■■■□ 3.19
USP34Q70CQ2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.76■■■■□ 3.16
USP34Q70CQ2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
USP34Q70CQ2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
USP34Q70CQ2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
USP34Q70CQ2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
USP34Q70CQ2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
USP34Q70CQ2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
USP34Q70CQ2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.39■■■□□ 2.93
USP34Q70CQ2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.35■■■□□ 2.93
USP34Q70CQ2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
USP34Q70CQ2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
USP34Q70CQ2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
USP34Q70CQ2 AL356512.1-201ENST00000607453 1739 ntBASIC32.88■■■□□ 2.85
USP34Q70CQ2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
USP34Q70CQ2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.86■■■□□ 2.85
USP34Q70CQ2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
USP34Q70CQ2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.7■■■□□ 2.82
USP34Q70CQ2 AC006077.2-201ENST00000623591 457 ntBASIC32.46■■■□□ 2.79
USP34Q70CQ2 ZNRF2P1-201ENST00000441407 443 ntBASIC32.4■■■□□ 2.78
USP34Q70CQ2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
USP34Q70CQ2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
USP34Q70CQ2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
USP34Q70CQ2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
USP34Q70CQ2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
USP34Q70CQ2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
USP34Q70CQ2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.17■■■□□ 2.74
USP34Q70CQ2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.16■■■□□ 2.74
USP34Q70CQ2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.11■■■□□ 2.73
USP34Q70CQ2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.01■■■□□ 2.71
USP34Q70CQ2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
USP34Q70CQ2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
USP34Q70CQ2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
USP34Q70CQ2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP34Q70CQ2 AP002365.1-201ENST00000603448 772 ntBASIC31.58■■■□□ 2.65
USP34Q70CQ2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.58■■■□□ 2.65
USP34Q70CQ2 AC015813.7-201ENST00000623294 581 ntBASIC31.41■■■□□ 2.62
USP34Q70CQ2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP34Q70CQ2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.38■■■□□ 2.61
USP34Q70CQ2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
USP34Q70CQ2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.34■■■□□ 2.61
USP34Q70CQ2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
USP34Q70CQ2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP34Q70CQ2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
USP34Q70CQ2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.26■■■□□ 2.59
USP34Q70CQ2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.24■■■□□ 2.59
USP34Q70CQ2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
USP34Q70CQ2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
USP34Q70CQ2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
USP34Q70CQ2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.15■■■□□ 2.58
USP34Q70CQ2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
USP34Q70CQ2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.04■■■□□ 2.56
USP34Q70CQ2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.95■■■□□ 2.55
USP34Q70CQ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.94■■■□□ 2.54
USP34Q70CQ2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
USP34Q70CQ2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP34Q70CQ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP34Q70CQ2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.81■■■□□ 2.52
USP34Q70CQ2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.8■■■□□ 2.52
USP34Q70CQ2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
USP34Q70CQ2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP34Q70CQ2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP34Q70CQ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.73■■■□□ 2.51
USP34Q70CQ2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.73■■■□□ 2.51
USP34Q70CQ2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
USP34Q70CQ2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.68■■■□□ 2.5
USP34Q70CQ2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
USP34Q70CQ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.64■■■□□ 2.5
USP34Q70CQ2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.61■■■□□ 2.49
USP34Q70CQ2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
USP34Q70CQ2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
USP34Q70CQ2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
USP34Q70CQ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.52■■■□□ 2.48
USP34Q70CQ2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.5■■■□□ 2.47
USP34Q70CQ2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
USP34Q70CQ2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
USP34Q70CQ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
USP34Q70CQ2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.39■■■□□ 2.45
USP34Q70CQ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.39■■■□□ 2.45
USP34Q70CQ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
USP34Q70CQ2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.37■■■□□ 2.45
USP34Q70CQ2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP34Q70CQ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP34Q70CQ2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.35■■■□□ 2.45
USP34Q70CQ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.35■■■□□ 2.45
USP34Q70CQ2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP34Q70CQ2 RPS2P35-201ENST00000443417 897 ntBASIC30.34■■■□□ 2.45
USP34Q70CQ2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP34Q70CQ2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP34Q70CQ2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP34Q70CQ2 DYNLL1-208ENST00000550178 581 ntBASIC30.28■■■□□ 2.44
USP34Q70CQ2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
USP34Q70CQ2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.2■■■□□ 2.42
USP34Q70CQ2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
USP34Q70CQ2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.12■■■□□ 2.41
USP34Q70CQ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
USP34Q70CQ2 AC136428.2-201ENST00000563187 214 ntBASIC30.09■■■□□ 2.41
USP34Q70CQ2 RARRES2P7-201ENST00000567349 469 ntBASIC30.08■■■□□ 2.41
USP34Q70CQ2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
USP34Q70CQ2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms