Protein–RNA interactions for Protein: P0DH78

RNF224, RING finger protein 224, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF224P0DH78 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.78■■■□□ 2.52
RNF224P0DH78 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
RNF224P0DH78 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
RNF224P0DH78 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF224P0DH78 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RNF224P0DH78 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RNF224P0DH78 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RNF224P0DH78 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
RNF224P0DH78 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.37■■■□□ 2.29
RNF224P0DH78 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
RNF224P0DH78 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RNF224P0DH78 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.13■■■□□ 2.25
RNF224P0DH78 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.05■■■□□ 2.24
RNF224P0DH78 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF224P0DH78 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF224P0DH78 AL356512.1-201ENST00000607453 1739 ntBASIC28.92■■■□□ 2.22
RNF224P0DH78 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
RNF224P0DH78 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF224P0DH78 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF224P0DH78 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF224P0DH78 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RNF224P0DH78 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.51■■■□□ 2.15
RNF224P0DH78 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
RNF224P0DH78 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RNF224P0DH78 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF224P0DH78 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.39■■■□□ 2.14
RNF224P0DH78 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
RNF224P0DH78 ZNRF2P1-201ENST00000441407 443 ntBASIC28.26■■■□□ 2.11
RNF224P0DH78 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF224P0DH78 AC006077.2-201ENST00000623591 457 ntBASIC28.15■■■□□ 2.1
RNF224P0DH78 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.13■■■□□ 2.09
RNF224P0DH78 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
RNF224P0DH78 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RNF224P0DH78 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.84■■■□□ 2.05
RNF224P0DH78 AC015813.7-201ENST00000623294 581 ntBASIC27.79■■■□□ 2.04
RNF224P0DH78 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RNF224P0DH78 AP002365.1-201ENST00000603448 772 ntBASIC27.57■■■□□ 2
RNF224P0DH78 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
RNF224P0DH78 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.49■■□□□ 1.99
RNF224P0DH78 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RNF224P0DH78 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.39■■□□□ 1.98
RNF224P0DH78 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.39■■□□□ 1.98
RNF224P0DH78 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
RNF224P0DH78 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RNF224P0DH78 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF224P0DH78 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
RNF224P0DH78 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF224P0DH78 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.27■■□□□ 1.96
RNF224P0DH78 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.27■■□□□ 1.96
RNF224P0DH78 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF224P0DH78 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.24■■□□□ 1.95
RNF224P0DH78 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.2■■□□□ 1.94
RNF224P0DH78 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
RNF224P0DH78 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.16■■□□□ 1.94
RNF224P0DH78 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.11■■□□□ 1.93
RNF224P0DH78 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RNF224P0DH78 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RNF224P0DH78 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.07■■□□□ 1.92
RNF224P0DH78 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
RNF224P0DH78 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
RNF224P0DH78 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
RNF224P0DH78 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27■■□□□ 1.91
RNF224P0DH78 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF224P0DH78 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF224P0DH78 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF224P0DH78 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.88■■□□□ 1.89
RNF224P0DH78 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF224P0DH78 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RNF224P0DH78 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF224P0DH78 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.82■■□□□ 1.88
RNF224P0DH78 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.8■■□□□ 1.88
RNF224P0DH78 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF224P0DH78 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
RNF224P0DH78 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF224P0DH78 DYNLL1-208ENST00000550178 581 ntBASIC26.76■■□□□ 1.87
RNF224P0DH78 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.68■■□□□ 1.86
RNF224P0DH78 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.67■■□□□ 1.86
RNF224P0DH78 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF224P0DH78 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF224P0DH78 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF224P0DH78 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF224P0DH78 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.6■■□□□ 1.85
RNF224P0DH78 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF224P0DH78 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
RNF224P0DH78 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF224P0DH78 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF224P0DH78 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF224P0DH78 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF224P0DH78 AL031258.1-201ENST00000623562 325 ntBASIC26.53■■□□□ 1.84
RNF224P0DH78 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.49■■□□□ 1.83
RNF224P0DH78 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF224P0DH78 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.49■■□□□ 1.83
RNF224P0DH78 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF224P0DH78 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF224P0DH78 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.48■■□□□ 1.83
RNF224P0DH78 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF224P0DH78 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF224P0DH78 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.45■■□□□ 1.82
RNF224P0DH78 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RNF224P0DH78 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms