Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC46.61■■■■■ 5.05
COL5A2P05997 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC46.38■■■■■ 5.02
COL5A2P05997 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC45.75■■■■■ 4.91
COL5A2P05997 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC45.51■■■■■ 4.88
COL5A2P05997 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC45.08■■■■■ 4.81
COL5A2P05997 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC44.74■■■■■ 4.75
COL5A2P05997 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC44.44■■■■■ 4.7
COL5A2P05997 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC44.34■■■■■ 4.69
COL5A2P05997 AL356512.1-201ENST00000607453 1739 ntBASIC44.33■■■■■ 4.69
COL5A2P05997 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC44.21■■■■■ 4.67
COL5A2P05997 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC44.11■■■■■ 4.65
COL5A2P05997 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC44.02■■■■■ 4.64
COL5A2P05997 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC44■■■■■ 4.63
COL5A2P05997 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC43.96■■■■■ 4.63
COL5A2P05997 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC43.58■■■■■ 4.57
COL5A2P05997 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC43.52■■■■■ 4.56
COL5A2P05997 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC43.46■■■■■ 4.55
COL5A2P05997 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC43.39■■■■■ 4.54
COL5A2P05997 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC43.36■■■■■ 4.53
COL5A2P05997 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
COL5A2P05997 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC42.95■■■■■ 4.47
COL5A2P05997 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC42.84■■■■■ 4.45
COL5A2P05997 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC42.82■■■■■ 4.45
COL5A2P05997 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC42.78■■■■■ 4.44
COL5A2P05997 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC42.74■■■■■ 4.43
COL5A2P05997 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
COL5A2P05997 HES6-203ENST00000409160 1600 ntTSL 2 BASIC42.67■■■■■ 4.42
COL5A2P05997 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC42.64■■■■■ 4.42
COL5A2P05997 INO80B-203ENST00000409917 796 ntTSL 2 BASIC42.58■■■■■ 4.41
COL5A2P05997 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC42.45■■■■■ 4.39
COL5A2P05997 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC42.33■■■■■ 4.37
COL5A2P05997 ZNRF2P1-201ENST00000441407 443 ntBASIC42.28■■■■■ 4.36
COL5A2P05997 AC006077.2-201ENST00000623591 457 ntBASIC42.25■■■■■ 4.35
COL5A2P05997 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC42.24■■■■■ 4.35
COL5A2P05997 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC42.12■■■■■ 4.33
COL5A2P05997 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC41.92■■■■■ 4.3
COL5A2P05997 AC015813.7-201ENST00000623294 581 ntBASIC41.92■■■■■ 4.3
COL5A2P05997 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC41.84■■■■■ 4.29
COL5A2P05997 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
COL5A2P05997 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC41.66■■■■■ 4.26
COL5A2P05997 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC41.51■■■■■ 4.24
COL5A2P05997 AP002365.1-201ENST00000603448 772 ntBASIC41.28■■■■■ 4.2
COL5A2P05997 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC41.24■■■■■ 4.19
COL5A2P05997 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC41.22■■■■■ 4.19
COL5A2P05997 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
COL5A2P05997 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
COL5A2P05997 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC41.05■■■■■ 4.16
COL5A2P05997 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC40.98■■■■■ 4.15
COL5A2P05997 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC40.96■■■■■ 4.15
COL5A2P05997 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC40.89■■■■■ 4.14
COL5A2P05997 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC40.88■■■■■ 4.13
COL5A2P05997 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
COL5A2P05997 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
COL5A2P05997 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC40.81■■■■■ 4.12
COL5A2P05997 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC40.81■■■■■ 4.12
COL5A2P05997 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC40.8■■■■■ 4.12
COL5A2P05997 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC40.8■■■■■ 4.12
COL5A2P05997 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC40.78■■■■■ 4.12
COL5A2P05997 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
COL5A2P05997 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC40.7■■■■■ 4.11
COL5A2P05997 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC40.7■■■■■ 4.11
COL5A2P05997 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC40.63■■■■■ 4.09
COL5A2P05997 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
COL5A2P05997 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
COL5A2P05997 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC40.46■■■■■ 4.07
COL5A2P05997 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC40.45■■■■■ 4.07
COL5A2P05997 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC40.41■■■■■ 4.06
COL5A2P05997 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC40.4■■■■■ 4.06
COL5A2P05997 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
COL5A2P05997 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
COL5A2P05997 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
COL5A2P05997 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC40.32■■■■■ 4.04
COL5A2P05997 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC40.27■■■■■ 4.04
COL5A2P05997 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC40.26■■■■■ 4.03
COL5A2P05997 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC40.24■■■■■ 4.03
COL5A2P05997 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
COL5A2P05997 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC40.2■■■■■ 4.03
COL5A2P05997 DYNLL1-208ENST00000550178 581 ntBASIC40.2■■■■■ 4.03
COL5A2P05997 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC40.15■■■■■ 4.02
COL5A2P05997 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC40.14■■■■■ 4.02
COL5A2P05997 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC40.13■■■■■ 4.02
COL5A2P05997 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC40.13■■■■■ 4.02
COL5A2P05997 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
COL5A2P05997 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
COL5A2P05997 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
COL5A2P05997 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC40.04■■■■■ 4
COL5A2P05997 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
COL5A2P05997 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
COL5A2P05997 AL031258.1-201ENST00000623562 325 ntBASIC39.89■■■■□ 3.98
COL5A2P05997 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC39.88■■■■□ 3.98
COL5A2P05997 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC39.81■■■■□ 3.96
COL5A2P05997 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC39.81■■■■□ 3.96
COL5A2P05997 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
COL5A2P05997 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
COL5A2P05997 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC39.75■■■■□ 3.95
COL5A2P05997 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC39.73■■■■□ 3.95
COL5A2P05997 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC39.73■■■■□ 3.95
COL5A2P05997 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC39.73■■■■□ 3.95
COL5A2P05997 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC39.71■■■■□ 3.95
COL5A2P05997 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms