Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.86■■■□□ 2.85
URB1O60287 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
URB1O60287 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
URB1O60287 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
URB1O60287 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
URB1O60287 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
URB1O60287 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
URB1O60287 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
URB1O60287 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
URB1O60287 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.28■■■□□ 2.6
URB1O60287 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
URB1O60287 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
URB1O60287 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.98■■■□□ 2.55
URB1O60287 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
URB1O60287 AL356512.1-201ENST00000607453 1739 ntBASIC30.78■■■□□ 2.52
URB1O60287 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.77■■■□□ 2.52
URB1O60287 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
URB1O60287 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
URB1O60287 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
URB1O60287 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
URB1O60287 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
URB1O60287 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
URB1O60287 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
URB1O60287 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.34■■■□□ 2.45
URB1O60287 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
URB1O60287 AC006077.2-201ENST00000623591 457 ntBASIC30.18■■■□□ 2.42
URB1O60287 ZNRF2P1-201ENST00000441407 443 ntBASIC30.17■■■□□ 2.42
URB1O60287 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.13■■■□□ 2.41
URB1O60287 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
URB1O60287 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
URB1O60287 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.88■■■□□ 2.37
URB1O60287 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
URB1O60287 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.76■■■□□ 2.35
URB1O60287 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
URB1O60287 AC015813.7-201ENST00000623294 581 ntBASIC29.6■■■□□ 2.33
URB1O60287 AP002365.1-201ENST00000603448 772 ntBASIC29.43■■■□□ 2.3
URB1O60287 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
URB1O60287 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
URB1O60287 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.3■■■□□ 2.28
URB1O60287 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
URB1O60287 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.18■■■□□ 2.26
URB1O60287 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
URB1O60287 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.17■■■□□ 2.26
URB1O60287 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
URB1O60287 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
URB1O60287 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
URB1O60287 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.08■■■□□ 2.25
URB1O60287 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.01■■■□□ 2.23
URB1O60287 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
URB1O60287 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29■■■□□ 2.23
URB1O60287 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29■■■□□ 2.23
URB1O60287 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.98■■■□□ 2.23
URB1O60287 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.96■■■□□ 2.23
URB1O60287 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
URB1O60287 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
URB1O60287 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.9■■■□□ 2.22
URB1O60287 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
URB1O60287 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
URB1O60287 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
URB1O60287 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
URB1O60287 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.76■■■□□ 2.19
URB1O60287 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.74■■■□□ 2.19
URB1O60287 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.73■■■□□ 2.19
URB1O60287 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
URB1O60287 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
URB1O60287 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
URB1O60287 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
URB1O60287 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
URB1O60287 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.56■■■□□ 2.16
URB1O60287 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.55■■■□□ 2.16
URB1O60287 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
URB1O60287 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.51■■■□□ 2.15
URB1O60287 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.5■■■□□ 2.15
URB1O60287 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
URB1O60287 DYNLL1-208ENST00000550178 581 ntBASIC28.48■■■□□ 2.15
URB1O60287 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
URB1O60287 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
URB1O60287 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
URB1O60287 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.38■■■□□ 2.13
URB1O60287 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
URB1O60287 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
URB1O60287 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
URB1O60287 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.32■■■□□ 2.12
URB1O60287 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
URB1O60287 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.26■■■□□ 2.11
URB1O60287 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
URB1O60287 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.25■■■□□ 2.11
URB1O60287 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
URB1O60287 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
URB1O60287 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
URB1O60287 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
URB1O60287 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.18■■■□□ 2.1
URB1O60287 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.18■■■□□ 2.1
URB1O60287 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
URB1O60287 RARRES2P7-201ENST00000567349 469 ntBASIC28.14■■■□□ 2.1
URB1O60287 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.13■■■□□ 2.09
URB1O60287 RPS2P35-201ENST00000443417 897 ntBASIC28.11■■■□□ 2.09
URB1O60287 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
URB1O60287 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.1■■■□□ 2.09
URB1O60287 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms