Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.86■■■□□ 2.85
URB1O60287 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
URB1O60287 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
URB1O60287 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
URB1O60287 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
URB1O60287 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
URB1O60287 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
URB1O60287 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
URB1O60287 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
URB1O60287 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.28■■■□□ 2.6
URB1O60287 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
URB1O60287 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
URB1O60287 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.98■■■□□ 2.55
URB1O60287 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
URB1O60287 AL356512.1-201ENST00000607453 1739 ntBASIC30.78■■■□□ 2.52
URB1O60287 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.77■■■□□ 2.52
URB1O60287 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
URB1O60287 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
URB1O60287 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
URB1O60287 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
URB1O60287 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
URB1O60287 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
URB1O60287 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
URB1O60287 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.34■■■□□ 2.45
URB1O60287 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
URB1O60287 AC006077.2-201ENST00000623591 457 ntBASIC30.18■■■□□ 2.42
URB1O60287 ZNRF2P1-201ENST00000441407 443 ntBASIC30.17■■■□□ 2.42
URB1O60287 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.13■■■□□ 2.41
URB1O60287 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
URB1O60287 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
URB1O60287 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.88■■■□□ 2.37
URB1O60287 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
URB1O60287 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.76■■■□□ 2.35
URB1O60287 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
URB1O60287 AC015813.7-201ENST00000623294 581 ntBASIC29.6■■■□□ 2.33
URB1O60287 AP002365.1-201ENST00000603448 772 ntBASIC29.43■■■□□ 2.3
URB1O60287 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
URB1O60287 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
URB1O60287 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.3■■■□□ 2.28
URB1O60287 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
URB1O60287 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.18■■■□□ 2.26
URB1O60287 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
URB1O60287 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.17■■■□□ 2.26
URB1O60287 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
URB1O60287 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
URB1O60287 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
URB1O60287 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.08■■■□□ 2.25
URB1O60287 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.01■■■□□ 2.23
URB1O60287 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
URB1O60287 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29■■■□□ 2.23
URB1O60287 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29■■■□□ 2.23
URB1O60287 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.98■■■□□ 2.23
URB1O60287 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.96■■■□□ 2.23
URB1O60287 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
URB1O60287 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
URB1O60287 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.9■■■□□ 2.22
URB1O60287 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
URB1O60287 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
URB1O60287 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
URB1O60287 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
URB1O60287 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.76■■■□□ 2.19
URB1O60287 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.74■■■□□ 2.19
URB1O60287 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.73■■■□□ 2.19
URB1O60287 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
URB1O60287 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
URB1O60287 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
URB1O60287 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
URB1O60287 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
URB1O60287 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.56■■■□□ 2.16
URB1O60287 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.55■■■□□ 2.16
URB1O60287 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
URB1O60287 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.51■■■□□ 2.15
URB1O60287 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.5■■■□□ 2.15
URB1O60287 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
URB1O60287 DYNLL1-208ENST00000550178 581 ntBASIC28.48■■■□□ 2.15
URB1O60287 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
URB1O60287 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
URB1O60287 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
URB1O60287 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.38■■■□□ 2.13
URB1O60287 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
URB1O60287 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
URB1O60287 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
URB1O60287 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.32■■■□□ 2.12
URB1O60287 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
URB1O60287 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.26■■■□□ 2.11
URB1O60287 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
URB1O60287 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.25■■■□□ 2.11
URB1O60287 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
URB1O60287 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
URB1O60287 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
URB1O60287 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
URB1O60287 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.18■■■□□ 2.1
URB1O60287 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.18■■■□□ 2.1
URB1O60287 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
URB1O60287 RARRES2P7-201ENST00000567349 469 ntBASIC28.14■■■□□ 2.1
URB1O60287 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.13■■■□□ 2.09
URB1O60287 RPS2P35-201ENST00000443417 897 ntBASIC28.11■■■□□ 2.09
URB1O60287 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
URB1O60287 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.1■■■□□ 2.09
URB1O60287 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms