Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC11.6□□□□□ -0.553e-6■■■□□ 18.4
MATR3P43243 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.793e-6■■■□□ 18.4
MATR3P43243 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.634e-6■■■□□ 18.4
MATR3P43243 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.03■□□□□ 0.322e-6■■■□□ 18.4
MATR3P43243 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.141e-6■■■□□ 18.4
MATR3P43243 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.51□□□□□ -1.211e-6■■■□□ 18.4
MATR3P43243 CENPJ-202ENST00000418179 691 ntTSL 1 (best)4.48□□□□□ -1.691e-6■■■□□ 18.4
MATR3P43243 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.81e-6■■■□□ 18.4
MATR3P43243 STRN3-207ENST00000555358 2208 ntTSL 1 (best)26.02■■□□□ 1.768e-7■■■□□ 18.4
MATR3P43243 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.98e-7■■■□□ 18.4
MATR3P43243 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.49■□□□□ 0.398e-7■■■□□ 18.4
MATR3P43243 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.181e-6■■■□□ 18.4
MATR3P43243 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.282e-6■■■□□ 18.4
MATR3P43243 SRBD1-203ENST00000475073 567 ntTSL 44.75□□□□□ -1.652e-6■■■□□ 18.4
MATR3P43243 LNPK-203ENST00000409660 2028 ntTSL 1 (best)27.9■■■□□ 2.065e-7■■■□□ 18.4
MATR3P43243 TMCC1-205ENST00000505616 402 ntTSL 211.5□□□□□ -0.572e-6■■■□□ 18.4
MATR3P43243 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.43□□□□□ -0.93e-8■■■□□ 18.4
MATR3P43243 GTPBP10-212ENST00000477972 490 ntTSL 49.38□□□□□ -0.916e-6■■■□□ 18.4
MATR3P43243 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.42□□□□□ -1.063e-8■■■□□ 18.4
MATR3P43243 HSD17B11-206ENST00000512344 641 ntTSL 57.12□□□□□ -1.273e-8■■■□□ 18.4
MATR3P43243 HSD17B11-207ENST00000513854 569 ntTSL 55.52□□□□□ -1.533e-8■■■□□ 18.4
MATR3P43243 HSD17B11-202ENST00000502576 571 ntTSL 25.34□□□□□ -1.553e-8■■■□□ 18.4
MATR3P43243 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.553e-8■■■□□ 18.4
MATR3P43243 HSD17B11-204ENST00000507518 843 ntTSL 34.8□□□□□ -1.643e-8■■■□□ 18.4
MATR3P43243 PCNX1-206ENST00000554292 402 ntTSL 431.12■■■□□ 2.572e-10■■■□□ 18.4
MATR3P43243 ST3GAL2-204ENST00000566097 904 ntTSL 230.23■■■□□ 2.433e-9■■■□□ 18.4
MATR3P43243 ST3GAL2-205ENST00000567586 557 ntTSL 427.46■■□□□ 1.993e-9■■■□□ 18.4
MATR3P43243 FBXW2-201ENST00000453291 1079 ntTSL 522.16■■□□□ 1.143e-9■■■□□ 18.4
MATR3P43243 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.593e-9■■■□□ 18.4
MATR3P43243 ST3GAL2-203ENST00000561708 581 ntTSL 418.71■□□□□ 0.593e-9■■■□□ 18.4
MATR3P43243 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.583e-9■■■□□ 18.4
MATR3P43243 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.48■□□□□ 0.553e-6■■■□□ 18.4
MATR3P43243 PCNX1-209ENST00000554879 4431 ntTSL 1 (best)18.35■□□□□ 0.532e-10■■■□□ 18.4
MATR3P43243 FBXW2-202ENST00000474117 1062 ntTSL 518.04■□□□□ 0.483e-9■■■□□ 18.4
MATR3P43243 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)18■□□□□ 0.473e-9■■■□□ 18.4
MATR3P43243 ANKRD11-210ENST00000566858 580 ntTSL 417.37■□□□□ 0.373e-9■■■□□ 18.4
MATR3P43243 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.17■□□□□ 0.343e-9■■■□□ 18.4
MATR3P43243 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.23e-9■■■□□ 18.4
MATR3P43243 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.183e-9■■■□□ 18.4
MATR3P43243 ADGRD1-204ENST00000446583 5529 ntTSL 516.13■□□□□ 0.173e-6■■■□□ 18.4
MATR3P43243 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16■□□□□ 0.153e-9■■■□□ 18.4
MATR3P43243 LRRFIP1-210ENST00000474195 1957 ntTSL 215.85■□□□□ 0.133e-9■■■□□ 18.4
MATR3P43243 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.6■□□□□ 0.093e-9■■■□□ 18.4
MATR3P43243 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.033e-6■■■□□ 18.4
MATR3P43243 SHANK2-209ENST00000445654 522 ntTSL 315.09■□□□□ 0.013e-9■■■□□ 18.4
MATR3P43243 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.78□□□□□ -0.043e-9■■■□□ 18.4
MATR3P43243 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-9■■■□□ 18.4
MATR3P43243 PTK2-226ENST00000520917 653 ntTSL 414.28□□□□□ -0.123e-9■■■□□ 18.4
MATR3P43243 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC14.16□□□□□ -0.143e-9■■■□□ 18.4
MATR3P43243 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC14.08□□□□□ -0.163e-9■■■□□ 18.4
MATR3P43243 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC14.02□□□□□ -0.173e-6■■■□□ 18.4
MATR3P43243 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC13.97□□□□□ -0.173e-9■■■□□ 18.4
MATR3P43243 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC13.97□□□□□ -0.173e-9■■■□□ 18.4
MATR3P43243 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC13.8□□□□□ -0.23e-9■■■□□ 18.4
MATR3P43243 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-9■■■□□ 18.4
MATR3P43243 ADGRD1-203ENST00000376682 4135 ntTSL 213.58□□□□□ -0.243e-6■■■□□ 18.4
MATR3P43243 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC13.43□□□□□ -0.263e-9■■■□□ 18.4
MATR3P43243 SHANK2-205ENST00000412252 1376 ntTSL 513.03□□□□□ -0.323e-9■■■□□ 18.4
MATR3P43243 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC12.66□□□□□ -0.383e-6■■■□□ 18.4
MATR3P43243 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC12.3□□□□□ -0.443e-9■■■□□ 18.4
MATR3P43243 LRRFIP1-211ENST00000478958 2869 ntTSL 1 (best)12.29□□□□□ -0.443e-9■■■□□ 18.4
MATR3P43243 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC10.92□□□□□ -0.663e-6■■■□□ 18.4
MATR3P43243 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.893e-6■■■□□ 18.4
MATR3P43243 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.083e-9■■■□□ 18.4
MATR3P43243 CHST15-203ENST00000462406 826 ntTSL 28.21□□□□□ -1.13e-9■■■□□ 18.4
MATR3P43243 LRRFIP1-214ENST00000489603 531 ntTSL 34.88□□□□□ -1.633e-9■■■□□ 18.4
MATR3P43243 LRRFIP1-206ENST00000464608 564 ntTSL 34.21□□□□□ -1.743e-9■■■□□ 18.4
MATR3P43243 SMYD3-201ENST00000366516 1863 ntTSL 1 (best)10.04□□□□□ -0.82e-6■■■□□ 18.4
MATR3P43243 SMYD3-209ENST00000470510 1042 ntTSL 57.85□□□□□ -1.152e-6■■■□□ 18.4
MATR3P43243 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)24.91■■□□□ 1.582e-6■■■□□ 18.4
MATR3P43243 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.932e-6■■■□□ 18.4
MATR3P43243 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.7□□□□□ -0.063e-6■■■□□ 18.4
MATR3P43243 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC14.36□□□□□ -0.113e-6■■■□□ 18.4
MATR3P43243 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.953e-6■■■□□ 18.4
MATR3P43243 NFATC3-206ENST00000539828 2484 ntTSL 218.81■□□□□ 0.67e-7■■■□□ 18.4
MATR3P43243 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.24■□□□□ 0.517e-7■■■□□ 18.4
MATR3P43243 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.69■□□□□ 0.267e-7■■■□□ 18.4
MATR3P43243 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)11.37□□□□□ -0.597e-7■■■□□ 18.4
MATR3P43243 NFATC3-204ENST00000379165 3583 ntTSL 210.81□□□□□ -0.687e-7■■■□□ 18.4
MATR3P43243 NFATC3-208ENST00000553077 3870 ntTSL 210.75□□□□□ -0.697e-7■■■□□ 18.4
MATR3P43243 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.047e-7■■■□□ 18.4
MATR3P43243 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)8.4□□□□□ -1.077e-7■■■□□ 18.4
MATR3P43243 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.19□□□□□ -1.17e-7■■■□□ 18.4
MATR3P43243 NFATC3-207ENST00000549350 3588 ntTSL 27.43□□□□□ -1.227e-7■■■□□ 18.4
MATR3P43243 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)7.32□□□□□ -1.247e-7■■■□□ 18.4
MATR3P43243 NFATC3-211ENST00000562926 3748 ntTSL 1 (best)7.12□□□□□ -1.277e-7■■■□□ 18.4
MATR3P43243 NFATC3-212ENST00000563288 3790 ntTSL 1 (best)7.1□□□□□ -1.277e-7■■■□□ 18.4
MATR3P43243 NFATC3-205ENST00000535127 4194 ntTSL 1 (best)6.59□□□□□ -1.357e-7■■■□□ 18.4
MATR3P43243 NFATC3-218ENST00000567152 3186 ntTSL 1 (best)6.34□□□□□ -1.397e-7■■■□□ 18.4
MATR3P43243 NFATC3-221ENST00000570212 3181 ntTSL 1 (best)6.01□□□□□ -1.457e-7■■■□□ 18.4
MATR3P43243 NFATC3-214ENST00000563796 3753 ntTSL 1 (best)4.76□□□□□ -1.657e-7■■■□□ 18.4
MATR3P43243 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.28□□□□□ -1.48e-7■■■□□ 18.4
MATR3P43243 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.16□□□□□ -1.588e-7■■■□□ 18.4
MATR3P43243 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.68e-7■■■□□ 18.4
MATR3P43243 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.473e-7■■■□□ 18.4
MATR3P43243 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.31■■□□□ 1.641e-6■■■□□ 18.4
MATR3P43243 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.531e-6■■■□□ 18.4
MATR3P43243 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC10.65□□□□□ -0.73e-6■■■□□ 18.3
MATR3P43243 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.371e-6■■■□□ 18.3
MATR3P43243 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.338e-7■■■□□ 18.3
Retrieved 100 of 16,209 protein–RNA pairs in 94.8 ms