RNA–Protein interactions for RNA: ENST00000616936.4

CENPJ-206, Transcript of centromere protein J, humanhuman

TSL 1 (best) BASIC

Gene CENPJ, Length 5,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPJ-206ENST00000616936 NISCHQ9Y2I1 1504 aa15□□□□□ -0.01
CENPJ-206ENST00000616936 CCDC180Q9P1Z9 1646 aa13.03□□□□□ -0.32
CENPJ-206ENST00000616936 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.37
CENPJ-206ENST00000616936 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
CENPJ-206ENST00000616936 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
CENPJ-206ENST00000616936 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
CENPJ-206ENST00000616936 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
CENPJ-206ENST00000616936 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
CENPJ-206ENST00000616936 ABCC9O60706 1549 aa11.99□□□□□ -0.49
CENPJ-206ENST00000616936 NACADO15069 1562 aa11.92□□□□□ -0.5
CENPJ-206ENST00000616936 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
CENPJ-206ENST00000616936 CECR2Q9BXF3 1484 aa11.77□□□□□ -0.52
CENPJ-206ENST00000616936 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
CENPJ-206ENST00000616936 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
CENPJ-206ENST00000616936 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
CENPJ-206ENST00000616936 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.53
CENPJ-206ENST00000616936 WIZO95785 1651 aa11.71□□□□□ -0.54
CENPJ-206ENST00000616936 EIF4G1Q04637 1599 aaKnown RBP11.7□□□□□ -0.54
CENPJ-206ENST00000616936 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
CENPJ-206ENST00000616936 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
CENPJ-206ENST00000616936 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
CENPJ-206ENST00000616936 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
CENPJ-206ENST00000616936 CHIC1Q5VXU3 224 aa11.42□□□□□ -0.58
CENPJ-206ENST00000616936 SMARCA2P51531 1590 aa11.42□□□□□ -0.58
CENPJ-206ENST00000616936 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
CENPJ-206ENST00000616936 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
CENPJ-206ENST00000616936 PABPN1Q86U42 306 aaKnown RBP eCLIP11.29□□□□□ -0.6
CENPJ-206ENST00000616936 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
CENPJ-206ENST00000616936 ATAD2BQ9ULI0 1458 aa11.22□□□□□ -0.61
CENPJ-206ENST00000616936 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
CENPJ-206ENST00000616936 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
CENPJ-206ENST00000616936 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
CENPJ-206ENST00000616936 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
CENPJ-206ENST00000616936 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
CENPJ-206ENST00000616936 CC2D2AQ9P2K1 1620 aa11.04□□□□□ -0.64
CENPJ-206ENST00000616936 NCAPD3P42695 1498 aa11.04□□□□□ -0.64
CENPJ-206ENST00000616936 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.65
CENPJ-206ENST00000616936 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
CENPJ-206ENST00000616936 SOGA1O94964 1423 aa10.96□□□□□ -0.66
CENPJ-206ENST00000616936 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
CENPJ-206ENST00000616936 DNAJC5BQ9UF47 199 aa10.94□□□□□ -0.66
CENPJ-206ENST00000616936 CUX1P39880 1505 aa10.93□□□□□ -0.66
CENPJ-206ENST00000616936 CFTRP13569 1480 aa10.89□□□□□ -0.67
CENPJ-206ENST00000616936 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
CENPJ-206ENST00000616936 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.68
CENPJ-206ENST00000616936 NESP48681 1621 aa10.8□□□□□ -0.68
CENPJ-206ENST00000616936 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
CENPJ-206ENST00000616936 KIF21BO75037 1637 aa10.79□□□□□ -0.68
CENPJ-206ENST00000616936 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
CENPJ-206ENST00000616936 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.7
CENPJ-206ENST00000616936 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
CENPJ-206ENST00000616936 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
CENPJ-206ENST00000616936 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
CENPJ-206ENST00000616936 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
CENPJ-206ENST00000616936 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.7
CENPJ-206ENST00000616936 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.71
CENPJ-206ENST00000616936 ABCA5Q8WWZ7 1642 aa10.63□□□□□ -0.71
CENPJ-206ENST00000616936 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
CENPJ-206ENST00000616936 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
CENPJ-206ENST00000616936 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
CENPJ-206ENST00000616936 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
CENPJ-206ENST00000616936 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
CENPJ-206ENST00000616936 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
CENPJ-206ENST00000616936 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
CENPJ-206ENST00000616936 ARAP1Q96P48 1450 aa10.58□□□□□ -0.72
CENPJ-206ENST00000616936 TNIKQ9UKE5 1360 aa10.58□□□□□ -0.72
CENPJ-206ENST00000616936 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
CENPJ-206ENST00000616936 EHMT2Q96KQ7 1210 aa10.57□□□□□ -0.72
CENPJ-206ENST00000616936 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
CENPJ-206ENST00000616936 EEA1Q15075 1411 aa10.56□□□□□ -0.72
CENPJ-206ENST00000616936 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CENPJ-206ENST00000616936 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
CENPJ-206ENST00000616936 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
CENPJ-206ENST00000616936 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
CENPJ-206ENST00000616936 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.72
CENPJ-206ENST00000616936 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
CENPJ-206ENST00000616936 CUX2O14529 1486 aa10.52□□□□□ -0.73
CENPJ-206ENST00000616936 IGF1RP08069 1367 aa10.51□□□□□ -0.73
CENPJ-206ENST00000616936 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
CENPJ-206ENST00000616936 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
CENPJ-206ENST00000616936 ARHGAP35Q9NRY4 1499 aa10.48□□□□□ -0.73
CENPJ-206ENST00000616936 CLIP1P30622 1438 aa10.46□□□□□ -0.74
CENPJ-206ENST00000616936 WDR62O43379 1518 aa10.45□□□□□ -0.74
CENPJ-206ENST00000616936 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
CENPJ-206ENST00000616936 PPARGC1BQ86YN6 1023 aaKnown RBP10.43□□□□□ -0.74
CENPJ-206ENST00000616936 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
CENPJ-206ENST00000616936 CUL7Q14999 1698 aa10.42□□□□□ -0.74
CENPJ-206ENST00000616936 CFAP43Q8NDM7 1665 aa10.4□□□□□ -0.74
CENPJ-206ENST00000616936 HRCP23327 699 aa10.4□□□□□ -0.74
CENPJ-206ENST00000616936 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
CENPJ-206ENST00000616936 KIF27Q86VH2 1401 aa10.38□□□□□ -0.75
CENPJ-206ENST00000616936 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
CENPJ-206ENST00000616936 PCF11O94913 1555 aaKnown RBP10.37□□□□□ -0.75
CENPJ-206ENST00000616936 ADAMTS12P58397 1594 aa10.37□□□□□ -0.75
CENPJ-206ENST00000616936 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
CENPJ-206ENST00000616936 TRIM26Q12899 539 aaPredicted RBP10.35□□□□□ -0.75
CENPJ-206ENST00000616936 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
CENPJ-206ENST00000616936 MAGI3Q5TCQ9 1506 aa10.33□□□□□ -0.76
CENPJ-206ENST00000616936 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
CENPJ-206ENST00000616936 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms