RNA–Protein interactions for RNA: ENST00000629385.1

ABCC4-207, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCC4, Length 2,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-207ENST00000629385 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
ABCC4-207ENST00000629385 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
ABCC4-207ENST00000629385 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
ABCC4-207ENST00000629385 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.26
ABCC4-207ENST00000629385 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
ABCC4-207ENST00000629385 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
ABCC4-207ENST00000629385 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.11
ABCC4-207ENST00000629385 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
ABCC4-207ENST00000629385 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
ABCC4-207ENST00000629385 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
ABCC4-207ENST00000629385 ABCC9O60706 1549 aa21.68■■□□□ 1.06
ABCC4-207ENST00000629385 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
ABCC4-207ENST00000629385 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
ABCC4-207ENST00000629385 NACADO15069 1562 aa21.28■■□□□ 1
ABCC4-207ENST00000629385 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
ABCC4-207ENST00000629385 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
ABCC4-207ENST00000629385 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
ABCC4-207ENST00000629385 HRCP23327 699 aa21.16■□□□□ 0.98
ABCC4-207ENST00000629385 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
ABCC4-207ENST00000629385 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
ABCC4-207ENST00000629385 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
ABCC4-207ENST00000629385 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
ABCC4-207ENST00000629385 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.96
ABCC4-207ENST00000629385 WIZO95785 1651 aa20.96■□□□□ 0.95
ABCC4-207ENST00000629385 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
ABCC4-207ENST00000629385 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
ABCC4-207ENST00000629385 TRIM26Q12899 539 aaPredicted RBP20.73■□□□□ 0.91
ABCC4-207ENST00000629385 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
ABCC4-207ENST00000629385 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
ABCC4-207ENST00000629385 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
ABCC4-207ENST00000629385 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
ABCC4-207ENST00000629385 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
ABCC4-207ENST00000629385 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
ABCC4-207ENST00000629385 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
ABCC4-207ENST00000629385 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
ABCC4-207ENST00000629385 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
ABCC4-207ENST00000629385 SOGA1O94964 1423 aa20.3■□□□□ 0.84
ABCC4-207ENST00000629385 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
ABCC4-207ENST00000629385 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
ABCC4-207ENST00000629385 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
ABCC4-207ENST00000629385 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
ABCC4-207ENST00000629385 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ABCC4-207ENST00000629385 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
ABCC4-207ENST00000629385 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
ABCC4-207ENST00000629385 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
ABCC4-207ENST00000629385 PEG3Q9GZU2 1588 aa20.1■□□□□ 0.81
ABCC4-207ENST00000629385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
ABCC4-207ENST00000629385 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
ABCC4-207ENST00000629385 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
ABCC4-207ENST00000629385 SYNJ1O43426 1573 aa20■□□□□ 0.79
ABCC4-207ENST00000629385 EEA1Q15075 1411 aa20■□□□□ 0.79
ABCC4-207ENST00000629385 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
ABCC4-207ENST00000629385 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
ABCC4-207ENST00000629385 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
ABCC4-207ENST00000629385 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.77
ABCC4-207ENST00000629385 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
ABCC4-207ENST00000629385 CLIP1P30622 1438 aa19.78■□□□□ 0.76
ABCC4-207ENST00000629385 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
ABCC4-207ENST00000629385 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
ABCC4-207ENST00000629385 APLP2Q06481 763 aa19.73■□□□□ 0.75
ABCC4-207ENST00000629385 KIF21BO75037 1637 aa19.71■□□□□ 0.75
ABCC4-207ENST00000629385 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
ABCC4-207ENST00000629385 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
ABCC4-207ENST00000629385 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
ABCC4-207ENST00000629385 CUX1P39880 1505 aa19.6■□□□□ 0.73
ABCC4-207ENST00000629385 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
ABCC4-207ENST00000629385 CFTRP13569 1480 aa19.56■□□□□ 0.72
ABCC4-207ENST00000629385 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
ABCC4-207ENST00000629385 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
ABCC4-207ENST00000629385 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
ABCC4-207ENST00000629385 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
ABCC4-207ENST00000629385 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
ABCC4-207ENST00000629385 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
ABCC4-207ENST00000629385 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
ABCC4-207ENST00000629385 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
ABCC4-207ENST00000629385 KANK4Q5T7N3 995 aaPredicted RBP19.44■□□□□ 0.7
ABCC4-207ENST00000629385 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
ABCC4-207ENST00000629385 CUX2O14529 1486 aa19.42■□□□□ 0.7
ABCC4-207ENST00000629385 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
ABCC4-207ENST00000629385 ARAP1Q96P48 1450 aa19.39■□□□□ 0.7
ABCC4-207ENST00000629385 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
ABCC4-207ENST00000629385 ITGAEP38570 1179 aa19.34■□□□□ 0.69
ABCC4-207ENST00000629385 IGF1RP08069 1367 aa19.34■□□□□ 0.69
ABCC4-207ENST00000629385 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
ABCC4-207ENST00000629385 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
ABCC4-207ENST00000629385 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
ABCC4-207ENST00000629385 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
ABCC4-207ENST00000629385 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
ABCC4-207ENST00000629385 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
ABCC4-207ENST00000629385 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
ABCC4-207ENST00000629385 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
ABCC4-207ENST00000629385 NESP48681 1621 aa19.25■□□□□ 0.67
ABCC4-207ENST00000629385 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
ABCC4-207ENST00000629385 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
ABCC4-207ENST00000629385 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
ABCC4-207ENST00000629385 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
ABCC4-207ENST00000629385 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
ABCC4-207ENST00000629385 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
ABCC4-207ENST00000629385 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
ABCC4-207ENST00000629385 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms