RNA–Protein interactions for RNA: ENST00000376887.8

ABCC4-201, Transcript of ATP binding cassette subfamily C member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-201ENST00000376887 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
ABCC4-201ENST00000376887 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
ABCC4-201ENST00000376887 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
ABCC4-201ENST00000376887 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
ABCC4-201ENST00000376887 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
ABCC4-201ENST00000376887 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
ABCC4-201ENST00000376887 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
ABCC4-201ENST00000376887 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.4
ABCC4-201ENST00000376887 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
ABCC4-201ENST00000376887 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
ABCC4-201ENST00000376887 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
ABCC4-201ENST00000376887 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
ABCC4-201ENST00000376887 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
ABCC4-201ENST00000376887 HRCP23327 699 aa12.17□□□□□ -0.46
ABCC4-201ENST00000376887 ZCCHC6Q5VYS8 1495 aaKnown RBP12.15□□□□□ -0.47
ABCC4-201ENST00000376887 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
ABCC4-201ENST00000376887 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
ABCC4-201ENST00000376887 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.49
ABCC4-201ENST00000376887 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
ABCC4-201ENST00000376887 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
ABCC4-201ENST00000376887 ABCC9O60706 1549 aa12□□□□□ -0.49
ABCC4-201ENST00000376887 APLP2Q06481 763 aa11.98□□□□□ -0.49
ABCC4-201ENST00000376887 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
ABCC4-201ENST00000376887 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
ABCC4-201ENST00000376887 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
ABCC4-201ENST00000376887 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
ABCC4-201ENST00000376887 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
ABCC4-201ENST00000376887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
ABCC4-201ENST00000376887 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
ABCC4-201ENST00000376887 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
ABCC4-201ENST00000376887 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
ABCC4-201ENST00000376887 MYT1Q01538 1121 aa11.64□□□□□ -0.55
ABCC4-201ENST00000376887 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
ABCC4-201ENST00000376887 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
ABCC4-201ENST00000376887 NEFLP07196 543 aa11.61□□□□□ -0.55
ABCC4-201ENST00000376887 ATP1B4Q9UN42 357 aaPredicted RBP11.59□□□□□ -0.55
ABCC4-201ENST00000376887 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
ABCC4-201ENST00000376887 CECR2Q9BXF3 1484 aa11.55□□□□□ -0.56
ABCC4-201ENST00000376887 ITGAEP38570 1179 aa11.55□□□□□ -0.56
ABCC4-201ENST00000376887 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
ABCC4-201ENST00000376887 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
ABCC4-201ENST00000376887 RB1CC1Q8TDY2 1594 aa11.45□□□□□ -0.58
ABCC4-201ENST00000376887 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
ABCC4-201ENST00000376887 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
ABCC4-201ENST00000376887 NACADO15069 1562 aa11.3□□□□□ -0.6
ABCC4-201ENST00000376887 SOGA1O94964 1423 aa11.27□□□□□ -0.61
ABCC4-201ENST00000376887 ZNF316A6NFI3 1004 aaPredicted RBP11.27□□□□□ -0.61
ABCC4-201ENST00000376887 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
ABCC4-201ENST00000376887 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
ABCC4-201ENST00000376887 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
ABCC4-201ENST00000376887 WIZO95785 1651 aa11.25□□□□□ -0.61
ABCC4-201ENST00000376887 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
ABCC4-201ENST00000376887 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
ABCC4-201ENST00000376887 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
ABCC4-201ENST00000376887 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
ABCC4-201ENST00000376887 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
ABCC4-201ENST00000376887 CCDC88BA6NC98 1476 aa11.23□□□□□ -0.61
ABCC4-201ENST00000376887 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
ABCC4-201ENST00000376887 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
ABCC4-201ENST00000376887 CLIP1P30622 1438 aa11.16□□□□□ -0.62
ABCC4-201ENST00000376887 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
ABCC4-201ENST00000376887 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
ABCC4-201ENST00000376887 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
ABCC4-201ENST00000376887 MIER1Q8N108 512 aa11.13□□□□□ -0.63
ABCC4-201ENST00000376887 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
ABCC4-201ENST00000376887 CLSPNQ9HAW4 1339 aa11.11□□□□□ -0.63
ABCC4-201ENST00000376887 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
ABCC4-201ENST00000376887 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
ABCC4-201ENST00000376887 POLR3GLQ9BT43 218 aa11.06□□□□□ -0.64
ABCC4-201ENST00000376887 BCANQ96GW7 911 aa11.06□□□□□ -0.64
ABCC4-201ENST00000376887 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
ABCC4-201ENST00000376887 EEA1Q15075 1411 aa11.05□□□□□ -0.64
ABCC4-201ENST00000376887 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
ABCC4-201ENST00000376887 ZBTB47Q9UFB7 747 aaPredicted RBP11.03□□□□□ -0.64
ABCC4-201ENST00000376887 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
ABCC4-201ENST00000376887 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
ABCC4-201ENST00000376887 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
ABCC4-201ENST00000376887 KANK4Q5T7N3 995 aaPredicted RBP10.99□□□□□ -0.65
ABCC4-201ENST00000376887 TRIM52Q96A61 297 aa10.99□□□□□ -0.65
ABCC4-201ENST00000376887 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
ABCC4-201ENST00000376887 SMARCA4P51532 1647 aa10.96□□□□□ -0.66
ABCC4-201ENST00000376887 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
ABCC4-201ENST00000376887 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
ABCC4-201ENST00000376887 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
ABCC4-201ENST00000376887 VPS8Q8N3P4 1428 aa10.91□□□□□ -0.66
ABCC4-201ENST00000376887 FBLN2P98095 1184 aa10.9□□□□□ -0.66
ABCC4-201ENST00000376887 SIN3AQ96ST3 1273 aa10.9□□□□□ -0.66
ABCC4-201ENST00000376887 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
ABCC4-201ENST00000376887 ZNF326Q5BKZ1 582 aaKnown RBP10.89□□□□□ -0.67
ABCC4-201ENST00000376887 ATAD2BQ9ULI0 1458 aa10.88□□□□□ -0.67
ABCC4-201ENST00000376887 ANP32CO43423 234 aa10.87□□□□□ -0.67
ABCC4-201ENST00000376887 NEFMP07197 916 aa10.83□□□□□ -0.68
ABCC4-201ENST00000376887 CUX2O14529 1486 aa10.83□□□□□ -0.68
ABCC4-201ENST00000376887 FKBP8Q14318 412 aa10.82□□□□□ -0.68
ABCC4-201ENST00000376887 RRP7BPQ9NSQ0 103 aa10.82□□□□□ -0.68
ABCC4-201ENST00000376887 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
ABCC4-201ENST00000376887 CCNB3Q8WWL7 1395 aa10.81□□□□□ -0.68
ABCC4-201ENST00000376887 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
ABCC4-201ENST00000376887 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
ABCC4-201ENST00000376887 CARMIL1Q5VZK9 1371 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms