RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LRRFIP1-211ENST00000478958 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
LRRFIP1-211ENST00000478958 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
LRRFIP1-211ENST00000478958 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
LRRFIP1-211ENST00000478958 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
LRRFIP1-211ENST00000478958 MYT1Q01538 1121 aa18.41■□□□□ 0.54
LRRFIP1-211ENST00000478958 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
LRRFIP1-211ENST00000478958 HRCP23327 699 aa18.24■□□□□ 0.51
LRRFIP1-211ENST00000478958 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
LRRFIP1-211ENST00000478958 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
LRRFIP1-211ENST00000478958 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
LRRFIP1-211ENST00000478958 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
LRRFIP1-211ENST00000478958 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
LRRFIP1-211ENST00000478958 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
LRRFIP1-211ENST00000478958 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
LRRFIP1-211ENST00000478958 DCAF1Q9Y4B6 1507 aa17.6■□□□□ 0.41
LRRFIP1-211ENST00000478958 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
LRRFIP1-211ENST00000478958 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
LRRFIP1-211ENST00000478958 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
LRRFIP1-211ENST00000478958 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
LRRFIP1-211ENST00000478958 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
LRRFIP1-211ENST00000478958 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.36
LRRFIP1-211ENST00000478958 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
LRRFIP1-211ENST00000478958 ABCC9O60706 1549 aa17.23■□□□□ 0.35
LRRFIP1-211ENST00000478958 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
LRRFIP1-211ENST00000478958 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
LRRFIP1-211ENST00000478958 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
LRRFIP1-211ENST00000478958 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
LRRFIP1-211ENST00000478958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
LRRFIP1-211ENST00000478958 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
LRRFIP1-211ENST00000478958 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
LRRFIP1-211ENST00000478958 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
LRRFIP1-211ENST00000478958 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
LRRFIP1-211ENST00000478958 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
LRRFIP1-211ENST00000478958 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
LRRFIP1-211ENST00000478958 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
LRRFIP1-211ENST00000478958 WIZO95785 1651 aa16.77■□□□□ 0.28
LRRFIP1-211ENST00000478958 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
LRRFIP1-211ENST00000478958 ERICH6Q7L0X2 663 aa16.66■□□□□ 0.26
LRRFIP1-211ENST00000478958 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-211ENST00000478958 NACADO15069 1562 aa16.63■□□□□ 0.25
LRRFIP1-211ENST00000478958 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
LRRFIP1-211ENST00000478958 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
LRRFIP1-211ENST00000478958 SOGA1O94964 1423 aa16.56■□□□□ 0.24
LRRFIP1-211ENST00000478958 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
LRRFIP1-211ENST00000478958 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
LRRFIP1-211ENST00000478958 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
LRRFIP1-211ENST00000478958 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
LRRFIP1-211ENST00000478958 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
LRRFIP1-211ENST00000478958 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
LRRFIP1-211ENST00000478958 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
LRRFIP1-211ENST00000478958 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
LRRFIP1-211ENST00000478958 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
LRRFIP1-211ENST00000478958 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
LRRFIP1-211ENST00000478958 APLP2Q06481 763 aa16.44■□□□□ 0.22
LRRFIP1-211ENST00000478958 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
LRRFIP1-211ENST00000478958 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
LRRFIP1-211ENST00000478958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
LRRFIP1-211ENST00000478958 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
LRRFIP1-211ENST00000478958 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
LRRFIP1-211ENST00000478958 MIER1Q8N108 512 aa16.34■□□□□ 0.21
LRRFIP1-211ENST00000478958 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
LRRFIP1-211ENST00000478958 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
LRRFIP1-211ENST00000478958 EEA1Q15075 1411 aa16.25■□□□□ 0.19
LRRFIP1-211ENST00000478958 CLIP1P30622 1438 aa16.21■□□□□ 0.18
LRRFIP1-211ENST00000478958 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
LRRFIP1-211ENST00000478958 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
LRRFIP1-211ENST00000478958 RAPGEF2Q9Y4G8 1499 aa16.09■□□□□ 0.17
LRRFIP1-211ENST00000478958 SYNJ1O43426 1573 aa16.08■□□□□ 0.17
LRRFIP1-211ENST00000478958 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
LRRFIP1-211ENST00000478958 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
LRRFIP1-211ENST00000478958 ITGAEP38570 1179 aa16.03■□□□□ 0.16
LRRFIP1-211ENST00000478958 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
LRRFIP1-211ENST00000478958 KIF21BO75037 1637 aa15.97■□□□□ 0.15
LRRFIP1-211ENST00000478958 DHX57Q6P158 1386 aaKnown RBP15.94■□□□□ 0.14
LRRFIP1-211ENST00000478958 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
LRRFIP1-211ENST00000478958 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
LRRFIP1-211ENST00000478958 SUPT16HQ9Y5B9 1047 aaKnown RBP15.93■□□□□ 0.14
LRRFIP1-211ENST00000478958 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
LRRFIP1-211ENST00000478958 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
LRRFIP1-211ENST00000478958 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
LRRFIP1-211ENST00000478958 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
LRRFIP1-211ENST00000478958 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
LRRFIP1-211ENST00000478958 ARAP1Q96P48 1450 aa15.81■□□□□ 0.12
LRRFIP1-211ENST00000478958 BCANQ96GW7 911 aa15.78■□□□□ 0.12
LRRFIP1-211ENST00000478958 PRXQ9BXM0 1461 aa15.76■□□□□ 0.11
LRRFIP1-211ENST00000478958 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
LRRFIP1-211ENST00000478958 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
LRRFIP1-211ENST00000478958 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
LRRFIP1-211ENST00000478958 HIRIP3Q9BW71 556 aaPredicted RBP15.72■□□□□ 0.11
LRRFIP1-211ENST00000478958 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
LRRFIP1-211ENST00000478958 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
LRRFIP1-211ENST00000478958 SIN3AQ96ST3 1273 aa15.71■□□□□ 0.11
LRRFIP1-211ENST00000478958 RRBP1Q9P2E9 1410 aaKnown RBP15.7■□□□□ 0.1
LRRFIP1-211ENST00000478958 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
LRRFIP1-211ENST00000478958 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
LRRFIP1-211ENST00000478958 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
LRRFIP1-211ENST00000478958 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
LRRFIP1-211ENST00000478958 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
LRRFIP1-211ENST00000478958 ARHGAP35Q9NRY4 1499 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms