RNA–Protein interactions for RNA: ENST00000489603.5

LRRFIP1-214, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-214ENST00000489603 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
LRRFIP1-214ENST00000489603 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
LRRFIP1-214ENST00000489603 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
LRRFIP1-214ENST00000489603 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
LRRFIP1-214ENST00000489603 FOXD1Q16676 465 aa18.31■□□□□ 0.52
LRRFIP1-214ENST00000489603 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
LRRFIP1-214ENST00000489603 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
LRRFIP1-214ENST00000489603 ADRA2BP18089 450 aa17.25■□□□□ 0.35
LRRFIP1-214ENST00000489603 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
LRRFIP1-214ENST00000489603 MSH5O43196 834 aa17.1■□□□□ 0.33
LRRFIP1-214ENST00000489603 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
LRRFIP1-214ENST00000489603 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
LRRFIP1-214ENST00000489603 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
LRRFIP1-214ENST00000489603 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
LRRFIP1-214ENST00000489603 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
LRRFIP1-214ENST00000489603 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
LRRFIP1-214ENST00000489603 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
LRRFIP1-214ENST00000489603 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
LRRFIP1-214ENST00000489603 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
LRRFIP1-214ENST00000489603 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
LRRFIP1-214ENST00000489603 KCNA4P22459 653 aa14.96□□□□□ -0.01
LRRFIP1-214ENST00000489603 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
LRRFIP1-214ENST00000489603 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
LRRFIP1-214ENST00000489603 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
LRRFIP1-214ENST00000489603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.094e-6■□□□□ 10
LRRFIP1-214ENST00000489603 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
LRRFIP1-214ENST00000489603 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
LRRFIP1-214ENST00000489603 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
LRRFIP1-214ENST00000489603 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
LRRFIP1-214ENST00000489603 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
LRRFIP1-214ENST00000489603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
LRRFIP1-214ENST00000489603 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
LRRFIP1-214ENST00000489603 APLP2Q06481 763 aa13.95□□□□□ -0.18
LRRFIP1-214ENST00000489603 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
LRRFIP1-214ENST00000489603 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
LRRFIP1-214ENST00000489603 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
LRRFIP1-214ENST00000489603 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
LRRFIP1-214ENST00000489603 CAPN15O75808 1086 aa13.82□□□□□ -0.2
LRRFIP1-214ENST00000489603 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
LRRFIP1-214ENST00000489603 ZBTB22O15209 634 aa13.76□□□□□ -0.21
LRRFIP1-214ENST00000489603 DSG3P32926 999 aa13.74□□□□□ -0.21
LRRFIP1-214ENST00000489603 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
LRRFIP1-214ENST00000489603 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
LRRFIP1-214ENST00000489603 ABCB7O75027 752 aa13.49□□□□□ -0.25
LRRFIP1-214ENST00000489603 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
LRRFIP1-214ENST00000489603 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
LRRFIP1-214ENST00000489603 POLA2Q14181 598 aa13.4□□□□□ -0.26
LRRFIP1-214ENST00000489603 EHMT2Q96KQ7 1210 aa13.31□□□□□ -0.28
LRRFIP1-214ENST00000489603 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
LRRFIP1-214ENST00000489603 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
LRRFIP1-214ENST00000489603 FBLN2P98095 1184 aa13.01□□□□□ -0.33
LRRFIP1-214ENST00000489603 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
LRRFIP1-214ENST00000489603 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
LRRFIP1-214ENST00000489603 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
LRRFIP1-214ENST00000489603 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
LRRFIP1-214ENST00000489603 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
LRRFIP1-214ENST00000489603 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
LRRFIP1-214ENST00000489603 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
LRRFIP1-214ENST00000489603 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
LRRFIP1-214ENST00000489603 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
LRRFIP1-214ENST00000489603 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
LRRFIP1-214ENST00000489603 POTEHQ6S545 545 aa12.68□□□□□ -0.38
LRRFIP1-214ENST00000489603 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
LRRFIP1-214ENST00000489603 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
LRRFIP1-214ENST00000489603 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
LRRFIP1-214ENST00000489603 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
LRRFIP1-214ENST00000489603 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRRFIP1-214ENST00000489603 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
LRRFIP1-214ENST00000489603 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
LRRFIP1-214ENST00000489603 PROM2Q8N271 834 aa12.32□□□□□ -0.44
LRRFIP1-214ENST00000489603 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
LRRFIP1-214ENST00000489603 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
LRRFIP1-214ENST00000489603 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-214ENST00000489603 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
LRRFIP1-214ENST00000489603 FKBP8Q14318 412 aa12.11□□□□□ -0.47
LRRFIP1-214ENST00000489603 HAX1O00165 279 aa12.09□□□□□ -0.47
LRRFIP1-214ENST00000489603 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
LRRFIP1-214ENST00000489603 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
LRRFIP1-214ENST00000489603 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
LRRFIP1-214ENST00000489603 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-214ENST00000489603 EVX2Q03828 476 aa11.95□□□□□ -0.5
LRRFIP1-214ENST00000489603 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
LRRFIP1-214ENST00000489603 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
LRRFIP1-214ENST00000489603 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
LRRFIP1-214ENST00000489603 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
LRRFIP1-214ENST00000489603 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
LRRFIP1-214ENST00000489603 CLCN6P51797 869 aa11.84□□□□□ -0.51
LRRFIP1-214ENST00000489603 MIER1Q8N108 512 aa11.83□□□□□ -0.52
LRRFIP1-214ENST00000489603 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
LRRFIP1-214ENST00000489603 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
LRRFIP1-214ENST00000489603 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
LRRFIP1-214ENST00000489603 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
LRRFIP1-214ENST00000489603 GABBR2O75899 941 aa11.75□□□□□ -0.53
LRRFIP1-214ENST00000489603 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
LRRFIP1-214ENST00000489603 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
LRRFIP1-214ENST00000489603 NUBP1P53384 320 aa11.62□□□□□ -0.55
LRRFIP1-214ENST00000489603 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
LRRFIP1-214ENST00000489603 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
LRRFIP1-214ENST00000489603 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
LRRFIP1-214ENST00000489603 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms