RNA–Protein interactions for RNA: ENST00000464608.5

LRRFIP1-206, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-206ENST00000464608 AEBP2Q6ZN18 517 aaPredicted RBP26.33■■□□□ 1.81
LRRFIP1-206ENST00000464608 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
LRRFIP1-206ENST00000464608 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
LRRFIP1-206ENST00000464608 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
LRRFIP1-206ENST00000464608 FOXD1Q16676 465 aa20.8■□□□□ 0.92
LRRFIP1-206ENST00000464608 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
LRRFIP1-206ENST00000464608 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.77
LRRFIP1-206ENST00000464608 ADRA2BP18089 450 aa19.8■□□□□ 0.76
LRRFIP1-206ENST00000464608 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
LRRFIP1-206ENST00000464608 MSH5O43196 834 aa19.24■□□□□ 0.67
LRRFIP1-206ENST00000464608 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
LRRFIP1-206ENST00000464608 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
LRRFIP1-206ENST00000464608 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
LRRFIP1-206ENST00000464608 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
LRRFIP1-206ENST00000464608 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
LRRFIP1-206ENST00000464608 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
LRRFIP1-206ENST00000464608 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
LRRFIP1-206ENST00000464608 KCNA4P22459 653 aa17.44■□□□□ 0.38
LRRFIP1-206ENST00000464608 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
LRRFIP1-206ENST00000464608 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
LRRFIP1-206ENST00000464608 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
LRRFIP1-206ENST00000464608 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
LRRFIP1-206ENST00000464608 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
LRRFIP1-206ENST00000464608 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
LRRFIP1-206ENST00000464608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.244e-6■□□□□ 10
LRRFIP1-206ENST00000464608 RNF39Q9H2S5 420 aa16.48■□□□□ 0.23
LRRFIP1-206ENST00000464608 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
LRRFIP1-206ENST00000464608 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
LRRFIP1-206ENST00000464608 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
LRRFIP1-206ENST00000464608 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
LRRFIP1-206ENST00000464608 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
LRRFIP1-206ENST00000464608 ZBTB22O15209 634 aa16.05■□□□□ 0.16
LRRFIP1-206ENST00000464608 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
LRRFIP1-206ENST00000464608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
LRRFIP1-206ENST00000464608 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
LRRFIP1-206ENST00000464608 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
LRRFIP1-206ENST00000464608 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
LRRFIP1-206ENST00000464608 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
LRRFIP1-206ENST00000464608 APLP2Q06481 763 aa15.82■□□□□ 0.12
LRRFIP1-206ENST00000464608 CAPN15O75808 1086 aa15.81■□□□□ 0.12
LRRFIP1-206ENST00000464608 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
LRRFIP1-206ENST00000464608 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
LRRFIP1-206ENST00000464608 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
LRRFIP1-206ENST00000464608 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
LRRFIP1-206ENST00000464608 DSG3P32926 999 aa15.6■□□□□ 0.09
LRRFIP1-206ENST00000464608 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
LRRFIP1-206ENST00000464608 ABCB7O75027 752 aa15.5■□□□□ 0.07
LRRFIP1-206ENST00000464608 POLA2Q14181 598 aa15.36■□□□□ 0.05
LRRFIP1-206ENST00000464608 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
LRRFIP1-206ENST00000464608 FBLN2P98095 1184 aa14.94□□□□□ -0.02
LRRFIP1-206ENST00000464608 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
LRRFIP1-206ENST00000464608 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
LRRFIP1-206ENST00000464608 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
LRRFIP1-206ENST00000464608 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
LRRFIP1-206ENST00000464608 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
LRRFIP1-206ENST00000464608 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
LRRFIP1-206ENST00000464608 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
LRRFIP1-206ENST00000464608 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
LRRFIP1-206ENST00000464608 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
LRRFIP1-206ENST00000464608 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
LRRFIP1-206ENST00000464608 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
LRRFIP1-206ENST00000464608 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
LRRFIP1-206ENST00000464608 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
LRRFIP1-206ENST00000464608 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
LRRFIP1-206ENST00000464608 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
LRRFIP1-206ENST00000464608 FKBP8Q14318 412 aa14.25□□□□□ -0.13
LRRFIP1-206ENST00000464608 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
LRRFIP1-206ENST00000464608 PROM2Q8N271 834 aa14.19□□□□□ -0.14
LRRFIP1-206ENST00000464608 POTEHQ6S545 545 aa14.16□□□□□ -0.14
LRRFIP1-206ENST00000464608 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
LRRFIP1-206ENST00000464608 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
LRRFIP1-206ENST00000464608 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
LRRFIP1-206ENST00000464608 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
LRRFIP1-206ENST00000464608 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
LRRFIP1-206ENST00000464608 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
LRRFIP1-206ENST00000464608 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
LRRFIP1-206ENST00000464608 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
LRRFIP1-206ENST00000464608 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
LRRFIP1-206ENST00000464608 HAX1O00165 279 aa13.71□□□□□ -0.21
LRRFIP1-206ENST00000464608 MIER1Q8N108 512 aa13.71□□□□□ -0.21
LRRFIP1-206ENST00000464608 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
LRRFIP1-206ENST00000464608 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
LRRFIP1-206ENST00000464608 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LRRFIP1-206ENST00000464608 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
LRRFIP1-206ENST00000464608 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
LRRFIP1-206ENST00000464608 EVX2Q03828 476 aa13.61□□□□□ -0.23
LRRFIP1-206ENST00000464608 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
LRRFIP1-206ENST00000464608 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
LRRFIP1-206ENST00000464608 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
LRRFIP1-206ENST00000464608 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
LRRFIP1-206ENST00000464608 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
LRRFIP1-206ENST00000464608 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
LRRFIP1-206ENST00000464608 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
LRRFIP1-206ENST00000464608 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
LRRFIP1-206ENST00000464608 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
LRRFIP1-206ENST00000464608 NUBP1P53384 320 aa13.41□□□□□ -0.26
LRRFIP1-206ENST00000464608 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
LRRFIP1-206ENST00000464608 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
LRRFIP1-206ENST00000464608 GABBR2O75899 941 aa13.32□□□□□ -0.28
LRRFIP1-206ENST00000464608 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms