RNA–Protein interactions for RNA: ENST00000474195.1

LRRFIP1-210, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 2

Gene LRRFIP1, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-210ENST00000474195 NISCHQ9Y2I1 1504 aa34.19■■■■□ 3.06
LRRFIP1-210ENST00000474195 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
LRRFIP1-210ENST00000474195 ABCC9O60706 1549 aa29.02■■■□□ 2.24
LRRFIP1-210ENST00000474195 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
LRRFIP1-210ENST00000474195 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
LRRFIP1-210ENST00000474195 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
LRRFIP1-210ENST00000474195 NACADO15069 1562 aa28.15■■■□□ 2.1
LRRFIP1-210ENST00000474195 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
LRRFIP1-210ENST00000474195 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
LRRFIP1-210ENST00000474195 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
LRRFIP1-210ENST00000474195 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
LRRFIP1-210ENST00000474195 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
LRRFIP1-210ENST00000474195 BICRAQ9NZM4 1560 aa27.27■■□□□ 1.96
LRRFIP1-210ENST00000474195 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
LRRFIP1-210ENST00000474195 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
LRRFIP1-210ENST00000474195 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
LRRFIP1-210ENST00000474195 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
LRRFIP1-210ENST00000474195 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
LRRFIP1-210ENST00000474195 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
LRRFIP1-210ENST00000474195 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
LRRFIP1-210ENST00000474195 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
LRRFIP1-210ENST00000474195 WIZO95785 1651 aa26.19■■□□□ 1.78
LRRFIP1-210ENST00000474195 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
LRRFIP1-210ENST00000474195 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
LRRFIP1-210ENST00000474195 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
LRRFIP1-210ENST00000474195 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
LRRFIP1-210ENST00000474195 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
LRRFIP1-210ENST00000474195 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
LRRFIP1-210ENST00000474195 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
LRRFIP1-210ENST00000474195 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
LRRFIP1-210ENST00000474195 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
LRRFIP1-210ENST00000474195 CCDC88BA6NC98 1476 aa25.59■■□□□ 1.69
LRRFIP1-210ENST00000474195 NESP48681 1621 aa25.31■■□□□ 1.64
LRRFIP1-210ENST00000474195 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
LRRFIP1-210ENST00000474195 CFTRP13569 1480 aa25.25■■□□□ 1.63
LRRFIP1-210ENST00000474195 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
LRRFIP1-210ENST00000474195 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
LRRFIP1-210ENST00000474195 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
LRRFIP1-210ENST00000474195 FANCD2Q9BXW9 1451 aa25.01■■□□□ 1.59
LRRFIP1-210ENST00000474195 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
LRRFIP1-210ENST00000474195 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
LRRFIP1-210ENST00000474195 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
LRRFIP1-210ENST00000474195 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
LRRFIP1-210ENST00000474195 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
LRRFIP1-210ENST00000474195 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
LRRFIP1-210ENST00000474195 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
LRRFIP1-210ENST00000474195 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
LRRFIP1-210ENST00000474195 CUX1P39880 1505 aa24.74■■□□□ 1.55
LRRFIP1-210ENST00000474195 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
LRRFIP1-210ENST00000474195 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
LRRFIP1-210ENST00000474195 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
LRRFIP1-210ENST00000474195 DNMBPQ6XZF7 1577 aa24.68■■□□□ 1.54
LRRFIP1-210ENST00000474195 WDR62O43379 1518 aa24.66■■□□□ 1.54
LRRFIP1-210ENST00000474195 TOP2BQ02880 1626 aa24.64■■□□□ 1.54
LRRFIP1-210ENST00000474195 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
LRRFIP1-210ENST00000474195 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
LRRFIP1-210ENST00000474195 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
LRRFIP1-210ENST00000474195 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
LRRFIP1-210ENST00000474195 CUX2O14529 1486 aa24.46■■□□□ 1.51
LRRFIP1-210ENST00000474195 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
LRRFIP1-210ENST00000474195 SOGA1O94964 1423 aa24.41■■□□□ 1.5
LRRFIP1-210ENST00000474195 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
LRRFIP1-210ENST00000474195 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
LRRFIP1-210ENST00000474195 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
LRRFIP1-210ENST00000474195 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
LRRFIP1-210ENST00000474195 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
LRRFIP1-210ENST00000474195 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
LRRFIP1-210ENST00000474195 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
LRRFIP1-210ENST00000474195 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.46
LRRFIP1-210ENST00000474195 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
LRRFIP1-210ENST00000474195 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
LRRFIP1-210ENST00000474195 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
LRRFIP1-210ENST00000474195 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
LRRFIP1-210ENST00000474195 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
LRRFIP1-210ENST00000474195 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
LRRFIP1-210ENST00000474195 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
LRRFIP1-210ENST00000474195 EEA1Q15075 1411 aa24.03■■□□□ 1.44
LRRFIP1-210ENST00000474195 IGF1RP08069 1367 aa24.03■■□□□ 1.44
LRRFIP1-210ENST00000474195 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
LRRFIP1-210ENST00000474195 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
LRRFIP1-210ENST00000474195 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
LRRFIP1-210ENST00000474195 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
LRRFIP1-210ENST00000474195 CUL7Q14999 1698 aa23.9■■□□□ 1.42
LRRFIP1-210ENST00000474195 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
LRRFIP1-210ENST00000474195 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
LRRFIP1-210ENST00000474195 EHMT2Q96KQ7 1210 aa23.87■■□□□ 1.41
LRRFIP1-210ENST00000474195 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
LRRFIP1-210ENST00000474195 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
LRRFIP1-210ENST00000474195 KIF21BO75037 1637 aa23.81■■□□□ 1.4
LRRFIP1-210ENST00000474195 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
LRRFIP1-210ENST00000474195 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
LRRFIP1-210ENST00000474195 FBLN2P98095 1184 aa23.8■■□□□ 1.4
LRRFIP1-210ENST00000474195 CHD1O14646 1710 aa23.8■■□□□ 1.4
LRRFIP1-210ENST00000474195 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
LRRFIP1-210ENST00000474195 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
LRRFIP1-210ENST00000474195 LOC105371045A0A1W2PR82 267 aa23.74■■□□□ 1.39
LRRFIP1-210ENST00000474195 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
LRRFIP1-210ENST00000474195 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
LRRFIP1-210ENST00000474195 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
LRRFIP1-210ENST00000474195 NUP160Q12769 1436 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms