Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC9.59□□□□□ -0.874e-6■■□□□ 12.8
LARP4Q71RC2 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC9.3□□□□□ -0.924e-6■■□□□ 12.8
LARP4Q71RC2 BRIX1-202ENST00000506023 743 ntTSL 39.26□□□□□ -0.934e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-212ENST00000542002 952 ntTSL 28.94□□□□□ -0.984e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-210ENST00000480171 2772 ntTSL 28.71□□□□□ -1.024e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.59□□□□□ -1.034e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-218ENST00000546298 564 ntTSL 48.54□□□□□ -1.044e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.074e-6■■□□□ 12.8
LARP4Q71RC2 UBAC1-206ENST00000489050 864 ntTSL 38.33□□□□□ -1.084e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-208ENST00000540447 6393 ntTSL 28.23□□□□□ -1.094e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-216ENST00000495123 580 ntTSL 58.01□□□□□ -1.134e-6■■□□□ 12.8
LARP4Q71RC2 VRK1-206ENST00000557222 1029 ntTSL 57.8□□□□□ -1.164e-6■■□□□ 12.8
LARP4Q71RC2 VRK1-203ENST00000555067 604 ntTSL 37.59□□□□□ -1.194e-6■■□□□ 12.8
LARP4Q71RC2 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.59□□□□□ -1.24e-6■■□□□ 12.8
LARP4Q71RC2 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.48□□□□□ -1.214e-6■■□□□ 12.8
LARP4Q71RC2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.43□□□□□ -1.224e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.33□□□□□ -1.244e-6■■□□□ 12.8
LARP4Q71RC2 AC135050.6-202ENST00000613584 392 ntBASIC6.95□□□□□ -1.34e-6■■□□□ 12.8
LARP4Q71RC2 ISPD-AS1-201ENST00000436328 430 ntTSL 36.93□□□□□ -1.34e-6■■□□□ 12.8
LARP4Q71RC2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.334e-6■■□□□ 12.8
LARP4Q71RC2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.7□□□□□ -1.344e-6■■□□□ 12.8
LARP4Q71RC2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.384e-6■■□□□ 12.8
LARP4Q71RC2 USP47-211ENST00000531513 936 ntTSL 25.92□□□□□ -1.464e-6■■□□□ 12.8
LARP4Q71RC2 USP47-204ENST00000525078 978 ntTSL 1 (best)5.71□□□□□ -1.54e-6■■□□□ 12.8
LARP4Q71RC2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.43□□□□□ -1.544e-6■■□□□ 12.8
LARP4Q71RC2 SRI-206ENST00000472930 903 ntTSL 25.34□□□□□ -1.554e-6■■□□□ 12.8
LARP4Q71RC2 ZHX1-204ENST00000517516 780 ntTSL 35.26□□□□□ -1.574e-6■■□□□ 12.8
LARP4Q71RC2 VRK1-202ENST00000553683 247 ntTSL 34.73□□□□□ -1.654e-6■■□□□ 12.8
LARP4Q71RC2 TRIB3-204ENST00000615226 877 ntTSL 34.73□□□□□ -1.654e-6■■□□□ 12.8
LARP4Q71RC2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.47□□□□□ -1.694e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-212ENST00000483881 452 ntTSL 23.72□□□□□ -1.814e-6■■□□□ 12.8
LARP4Q71RC2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.09□□□□□ -1.914e-6■■□□□ 12.8
LARP4Q71RC2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.81□□□□□ -1.964e-6■■□□□ 12.8
LARP4Q71RC2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.259e-7■■□□□ 12.8
LARP4Q71RC2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.071e-7■■□□□ 12.8
LARP4Q71RC2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.92□□□□□ -0.021e-7■■□□□ 12.8
LARP4Q71RC2 SEC11C-201ENST00000299714 727 ntTSL 511.94□□□□□ -0.51e-7■■□□□ 12.8
LARP4Q71RC2 SEC11C-206ENST00000591406 462 ntTSL 25.99□□□□□ -1.451e-7■■□□□ 12.8
LARP4Q71RC2 CARHSP1-213ENST00000569398 442 ntTSL 213.5□□□□□ -0.256e-16■■□□□ 12.8
LARP4Q71RC2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.161e-6■■□□□ 12.8
LARP4Q71RC2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.11□□□□□ -0.311e-6■■□□□ 12.8
LARP4Q71RC2 NME4-209ENST00000460297 1652 ntTSL 523.29■■□□□ 1.321e-8■■□□□ 12.8
LARP4Q71RC2 NME4-204ENST00000433358 966 ntTSL 321.22■□□□□ 0.991e-8■■□□□ 12.8
LARP4Q71RC2 NME4-206ENST00000448828 1167 ntTSL 220.73■□□□□ 0.911e-8■■□□□ 12.8
LARP4Q71RC2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.771e-8■■□□□ 12.8
LARP4Q71RC2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.88■□□□□ 0.771e-8■■□□□ 12.8
LARP4Q71RC2 NME4-210ENST00000468031 1861 ntTSL 218.63■□□□□ 0.571e-8■■□□□ 12.8
LARP4Q71RC2 NME4-205ENST00000444498 1111 ntTSL 317.12■□□□□ 0.331e-8■■□□□ 12.8
LARP4Q71RC2 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.59■□□□□ 0.091e-8■■□□□ 12.8
LARP4Q71RC2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.22□□□□□ -0.291e-8■■□□□ 12.8
LARP4Q71RC2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.852e-8■■□□□ 12.8
LARP4Q71RC2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.06■□□□□ 02e-8■■□□□ 12.8
LARP4Q71RC2 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-8■■□□□ 12.8
LARP4Q71RC2 ARPC3-203ENST00000467622 1098 ntTSL 58.69□□□□□ -1.022e-8■■□□□ 12.8
LARP4Q71RC2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.84□□□□□ -1.472e-8■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-203ENST00000360787 1724 ntTSL 515.01□□□□□ -0.011e-7■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-206ENST00000490912 5328 ntTSL 214.17□□□□□ -0.141e-7■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.17□□□□□ -0.31e-7■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.671e-7■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.88□□□□□ -0.671e-7■■□□□ 12.8
LARP4Q71RC2 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.161e-7■■□□□ 12.8
LARP4Q71RC2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.39■■□□□ 1.015e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.07■□□□□ 0.85e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.65e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.515e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.4■□□□□ 0.225e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.155e-8■■□□□ 12.7
LARP4Q71RC2 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.315e-8■■□□□ 12.7
LARP4Q71RC2 CERS2-202ENST00000345896 2170 ntTSL 229.42■■■□□ 2.39e-12■■□□□ 12.7
LARP4Q71RC2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.999e-12■■□□□ 12.7
LARP4Q71RC2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.749e-12■■□□□ 12.7
LARP4Q71RC2 CERS2-209ENST00000482825 1618 ntTSL 512.81□□□□□ -0.369e-12■■□□□ 12.7
LARP4Q71RC2 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC12.48□□□□□ -0.419e-12■■□□□ 12.7
LARP4Q71RC2 CERS2-213ENST00000560793 1661 ntTSL 1 (best)9.13□□□□□ -0.959e-12■■□□□ 12.7
LARP4Q71RC2 PRELID1-207ENST00000510797 712 ntTSL 322.3■■□□□ 1.161e-6■■□□□ 12.7
LARP4Q71RC2 PRELID1-208ENST00000511309 778 ntTSL 220.58■□□□□ 0.891e-6■■□□□ 12.7
LARP4Q71RC2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.76□□□□□ -0.054e-20■■□□□ 12.7
LARP4Q71RC2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.114e-20■■□□□ 12.7
LARP4Q71RC2 ILF2-204ENST00000480213 1008 ntTSL 56.71□□□□□ -1.344e-20■■□□□ 12.7
LARP4Q71RC2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.166e-8■■□□□ 12.7
LARP4Q71RC2 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.386e-8■■□□□ 12.7
LARP4Q71RC2 MAN2B1-210ENST00000493218 554 ntTSL 212.32□□□□□ -0.446e-8■■□□□ 12.7
LARP4Q71RC2 MAN2B1-206ENST00000466794 3685 ntTSL 211.8□□□□□ -0.526e-8■■□□□ 12.7
LARP4Q71RC2 MAN2B1-207ENST00000469423 574 ntTSL 211.53□□□□□ -0.566e-8■■□□□ 12.7
LARP4Q71RC2 MAN2B1-208ENST00000480851 323 ntTSL 36.62□□□□□ -1.356e-8■■□□□ 12.7
LARP4Q71RC2 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 319.96■□□□□ 0.799e-8■■□□□ 12.7
LARP4Q71RC2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.666e-7■■□□□ 12.7
LARP4Q71RC2 POLD2-216ENST00000489883 528 ntTSL 217.47■□□□□ 0.393e-11■■□□□ 12.7
LARP4Q71RC2 MPC2-203ENST00000458574 645 ntTSL 516.77■□□□□ 0.281e-7■■□□□ 12.7
LARP4Q71RC2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.093e-7■■□□□ 12.7
LARP4Q71RC2 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.433e-7■■□□□ 12.7
LARP4Q71RC2 CDC123-209ENST00000498747 890 ntTSL 311.53□□□□□ -0.566e-7■■□□□ 12.7
LARP4Q71RC2 CDC123-204ENST00000440613 685 ntTSL 510.81□□□□□ -0.686e-7■■□□□ 12.7
LARP4Q71RC2 MCM4-212ENST00000521151 1125 ntTSL 27.71□□□□□ -1.183e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.49e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-212ENST00000563038 2692 ntTSL 1 (best)16.94■□□□□ 0.39e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.43■□□□□ 0.229e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.059e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.019e-7■■□□□ 12.7
LARP4Q71RC2 BCAR1-218ENST00000566982 3024 ntTSL 214.96□□□□□ -0.019e-7■■□□□ 12.7
Retrieved 100 of 15,922 protein–RNA pairs in 222 ms