RNA–Protein interactions for RNA: ENST00000523557.1

LINC01608-201, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 544 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-201ENST00000523557 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
LINC01608-201ENST00000523557 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
LINC01608-201ENST00000523557 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
LINC01608-201ENST00000523557 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
LINC01608-201ENST00000523557 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
LINC01608-201ENST00000523557 FOXD1Q16676 465 aa15.91■□□□□ 0.14
LINC01608-201ENST00000523557 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
LINC01608-201ENST00000523557 ADRA2BP18089 450 aa15.42■□□□□ 0.06
LINC01608-201ENST00000523557 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
LINC01608-201ENST00000523557 MSH5O43196 834 aa14.63□□□□□ -0.07
LINC01608-201ENST00000523557 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
LINC01608-201ENST00000523557 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
LINC01608-201ENST00000523557 KCNA4P22459 653 aa14.2□□□□□ -0.14
LINC01608-201ENST00000523557 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.15
LINC01608-201ENST00000523557 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
LINC01608-201ENST00000523557 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
LINC01608-201ENST00000523557 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
LINC01608-201ENST00000523557 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
LINC01608-201ENST00000523557 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
LINC01608-201ENST00000523557 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
LINC01608-201ENST00000523557 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
LINC01608-201ENST00000523557 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
LINC01608-201ENST00000523557 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
LINC01608-201ENST00000523557 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
LINC01608-201ENST00000523557 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
LINC01608-201ENST00000523557 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
LINC01608-201ENST00000523557 ZBTB22O15209 634 aa13.07□□□□□ -0.32
LINC01608-201ENST00000523557 FOXD4L1Q9NU39 408 aa13.05□□□□□ -0.32
LINC01608-201ENST00000523557 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
LINC01608-201ENST00000523557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01608-201ENST00000523557 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
LINC01608-201ENST00000523557 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
LINC01608-201ENST00000523557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
LINC01608-201ENST00000523557 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
LINC01608-201ENST00000523557 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
LINC01608-201ENST00000523557 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
LINC01608-201ENST00000523557 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
LINC01608-201ENST00000523557 APLP2Q06481 763 aa12.44□□□□□ -0.42
LINC01608-201ENST00000523557 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
LINC01608-201ENST00000523557 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
LINC01608-201ENST00000523557 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
LINC01608-201ENST00000523557 ZNF219Q9P2Y4 722 aaPredicted RBP12.23□□□□□ -0.45
LINC01608-201ENST00000523557 CAPN15O75808 1086 aa12.22□□□□□ -0.45
LINC01608-201ENST00000523557 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
LINC01608-201ENST00000523557 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
LINC01608-201ENST00000523557 POLA2Q14181 598 aa12.04□□□□□ -0.48
LINC01608-201ENST00000523557 ABCB7O75027 752 aa11.99□□□□□ -0.49
LINC01608-201ENST00000523557 DSG3P32926 999 aa11.99□□□□□ -0.49
LINC01608-201ENST00000523557 FBLN2P98095 1184 aa11.89□□□□□ -0.51
LINC01608-201ENST00000523557 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
LINC01608-201ENST00000523557 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
LINC01608-201ENST00000523557 FKBP8Q14318 412 aa11.86□□□□□ -0.51
LINC01608-201ENST00000523557 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
LINC01608-201ENST00000523557 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
LINC01608-201ENST00000523557 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
LINC01608-201ENST00000523557 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
LINC01608-201ENST00000523557 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
LINC01608-201ENST00000523557 PROM2Q8N271 834 aa11.55□□□□□ -0.56
LINC01608-201ENST00000523557 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
LINC01608-201ENST00000523557 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
LINC01608-201ENST00000523557 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
LINC01608-201ENST00000523557 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
LINC01608-201ENST00000523557 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC01608-201ENST00000523557 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
LINC01608-201ENST00000523557 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
LINC01608-201ENST00000523557 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
LINC01608-201ENST00000523557 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
LINC01608-201ENST00000523557 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
LINC01608-201ENST00000523557 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
LINC01608-201ENST00000523557 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
LINC01608-201ENST00000523557 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
LINC01608-201ENST00000523557 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
LINC01608-201ENST00000523557 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
LINC01608-201ENST00000523557 MIER1Q8N108 512 aa11.06□□□□□ -0.64
LINC01608-201ENST00000523557 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
LINC01608-201ENST00000523557 POTEHQ6S545 545 aa11.05□□□□□ -0.64
LINC01608-201ENST00000523557 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
LINC01608-201ENST00000523557 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
LINC01608-201ENST00000523557 KLHL34Q8N239 644 aa11□□□□□ -0.65
LINC01608-201ENST00000523557 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
LINC01608-201ENST00000523557 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
LINC01608-201ENST00000523557 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
LINC01608-201ENST00000523557 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
LINC01608-201ENST00000523557 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
LINC01608-201ENST00000523557 FXR2P51116 673 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC01608-201ENST00000523557 CHADLQ6NUI6 762 aa10.81□□□□□ -0.68
LINC01608-201ENST00000523557 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
LINC01608-201ENST00000523557 PKD2Q13563 968 aa10.79□□□□□ -0.68
LINC01608-201ENST00000523557 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01608-201ENST00000523557 NUBP1P53384 320 aa10.78□□□□□ -0.68
LINC01608-201ENST00000523557 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.69
LINC01608-201ENST00000523557 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
LINC01608-201ENST00000523557 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
LINC01608-201ENST00000523557 GSE1Q14687 1217 aa10.72□□□□□ -0.69
LINC01608-201ENST00000523557 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
LINC01608-201ENST00000523557 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
LINC01608-201ENST00000523557 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
LINC01608-201ENST00000523557 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
LINC01608-201ENST00000523557 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
LINC01608-201ENST00000523557 RGL2O15211 777 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms