RNA–Protein interactions for RNA: ENST00000618312.4

MTHFD1L-212, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 5 BASIC

Gene MTHFD1L, Length 3,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-212ENST00000618312 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
MTHFD1L-212ENST00000618312 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
MTHFD1L-212ENST00000618312 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
MTHFD1L-212ENST00000618312 HRCP23327 699 aa15.02□□□□□ -0.01
MTHFD1L-212ENST00000618312 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
MTHFD1L-212ENST00000618312 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
MTHFD1L-212ENST00000618312 ABCC9O60706 1549 aa14.87□□□□□ -0.03
MTHFD1L-212ENST00000618312 MYT1Q01538 1121 aa14.83□□□□□ -0.04
MTHFD1L-212ENST00000618312 NACADO15069 1562 aa14.78□□□□□ -0.04
MTHFD1L-212ENST00000618312 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
MTHFD1L-212ENST00000618312 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
MTHFD1L-212ENST00000618312 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
MTHFD1L-212ENST00000618312 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
MTHFD1L-212ENST00000618312 SHROOM4Q9ULL8 1493 aa14.6□□□□□ -0.07
MTHFD1L-212ENST00000618312 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
MTHFD1L-212ENST00000618312 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
MTHFD1L-212ENST00000618312 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
MTHFD1L-212ENST00000618312 BICRAQ9NZM4 1560 aa14.21□□□□□ -0.13
MTHFD1L-212ENST00000618312 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
MTHFD1L-212ENST00000618312 GTF3C3Q9Y5Q9 886 aa14.08□□□□□ -0.15
MTHFD1L-212ENST00000618312 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
MTHFD1L-212ENST00000618312 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
MTHFD1L-212ENST00000618312 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
MTHFD1L-212ENST00000618312 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
MTHFD1L-212ENST00000618312 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
MTHFD1L-212ENST00000618312 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1L-212ENST00000618312 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
MTHFD1L-212ENST00000618312 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
MTHFD1L-212ENST00000618312 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1L-212ENST00000618312 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
MTHFD1L-212ENST00000618312 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1L-212ENST00000618312 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1L-212ENST00000618312 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
MTHFD1L-212ENST00000618312 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.21
MTHFD1L-212ENST00000618312 PABPN1Q86U42 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
MTHFD1L-212ENST00000618312 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
MTHFD1L-212ENST00000618312 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
MTHFD1L-212ENST00000618312 HMGXB3Q12766 1538 aa13.58□□□□□ -0.23
MTHFD1L-212ENST00000618312 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
MTHFD1L-212ENST00000618312 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
MTHFD1L-212ENST00000618312 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
MTHFD1L-212ENST00000618312 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
MTHFD1L-212ENST00000618312 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
MTHFD1L-212ENST00000618312 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
MTHFD1L-212ENST00000618312 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
MTHFD1L-212ENST00000618312 NCAPD3P42695 1498 aa13.53□□□□□ -0.24
MTHFD1L-212ENST00000618312 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
MTHFD1L-212ENST00000618312 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
MTHFD1L-212ENST00000618312 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
MTHFD1L-212ENST00000618312 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
MTHFD1L-212ENST00000618312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
MTHFD1L-212ENST00000618312 APLP2Q06481 763 aa13.31□□□□□ -0.28
MTHFD1L-212ENST00000618312 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1L-212ENST00000618312 TSHZ2Q9NRE2 1034 aa13.27□□□□□ -0.28
MTHFD1L-212ENST00000618312 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
MTHFD1L-212ENST00000618312 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
MTHFD1L-212ENST00000618312 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
MTHFD1L-212ENST00000618312 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
MTHFD1L-212ENST00000618312 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1L-212ENST00000618312 TOP2AP11388 1531 aaKnown RBP13.2□□□□□ -0.3
MTHFD1L-212ENST00000618312 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
MTHFD1L-212ENST00000618312 MIER1Q8N108 512 aa13.16□□□□□ -0.3
MTHFD1L-212ENST00000618312 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
MTHFD1L-212ENST00000618312 CUX2O14529 1486 aa13.15□□□□□ -0.3
MTHFD1L-212ENST00000618312 WIZO95785 1651 aa13.13□□□□□ -0.31
MTHFD1L-212ENST00000618312 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1L-212ENST00000618312 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
MTHFD1L-212ENST00000618312 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1L-212ENST00000618312 BCANQ96GW7 911 aa13.02□□□□□ -0.33
MTHFD1L-212ENST00000618312 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
MTHFD1L-212ENST00000618312 PDS5BQ9NTI5 1447 aa13□□□□□ -0.33
MTHFD1L-212ENST00000618312 CFTRP13569 1480 aa13□□□□□ -0.33
MTHFD1L-212ENST00000618312 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
MTHFD1L-212ENST00000618312 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
MTHFD1L-212ENST00000618312 KIF21AQ7Z4S6 1674 aa12.97□□□□□ -0.33
MTHFD1L-212ENST00000618312 WDR62O43379 1518 aa12.97□□□□□ -0.33
MTHFD1L-212ENST00000618312 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
MTHFD1L-212ENST00000618312 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
MTHFD1L-212ENST00000618312 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
MTHFD1L-212ENST00000618312 ERCC6Q03468 1493 aa12.9□□□□□ -0.34
MTHFD1L-212ENST00000618312 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
MTHFD1L-212ENST00000618312 MSH5O43196 834 aa12.88□□□□□ -0.35
MTHFD1L-212ENST00000618312 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
MTHFD1L-212ENST00000618312 NESP48681 1621 aa12.86□□□□□ -0.35
MTHFD1L-212ENST00000618312 DEKP35659 375 aaKnown RBP12.85□□□□□ -0.35
MTHFD1L-212ENST00000618312 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
MTHFD1L-212ENST00000618312 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
MTHFD1L-212ENST00000618312 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1L-212ENST00000618312 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
MTHFD1L-212ENST00000618312 ITGAEP38570 1179 aa12.79□□□□□ -0.36
MTHFD1L-212ENST00000618312 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
MTHFD1L-212ENST00000618312 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
MTHFD1L-212ENST00000618312 FKBP8Q14318 412 aa12.78□□□□□ -0.36
MTHFD1L-212ENST00000618312 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
MTHFD1L-212ENST00000618312 DNMBPQ6XZF7 1577 aa12.76□□□□□ -0.37
MTHFD1L-212ENST00000618312 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
MTHFD1L-212ENST00000618312 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
MTHFD1L-212ENST00000618312 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
MTHFD1L-212ENST00000618312 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
MTHFD1L-212ENST00000618312 NBR1Q14596 966 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms