RNA–Protein interactions for RNA: ENST00000467622.2

ARPC3-203, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-203ENST00000467622 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
ARPC3-203ENST00000467622 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
ARPC3-203ENST00000467622 NISCHQ9Y2I1 1504 aa21.9■■□□□ 1.1
ARPC3-203ENST00000467622 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
ARPC3-203ENST00000467622 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
ARPC3-203ENST00000467622 FOXD1Q16676 465 aa20.33■□□□□ 0.85
ARPC3-203ENST00000467622 ABCC9O60706 1549 aa19.96■□□□□ 0.79
ARPC3-203ENST00000467622 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
ARPC3-203ENST00000467622 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
ARPC3-203ENST00000467622 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
ARPC3-203ENST00000467622 ADRA2BP18089 450 aa19.24■□□□□ 0.67
ARPC3-203ENST00000467622 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
ARPC3-203ENST00000467622 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
ARPC3-203ENST00000467622 MSH5O43196 834 aa18.81■□□□□ 0.6
ARPC3-203ENST00000467622 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
ARPC3-203ENST00000467622 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
ARPC3-203ENST00000467622 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
ARPC3-203ENST00000467622 NACADO15069 1562 aa18.6■□□□□ 0.57
ARPC3-203ENST00000467622 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
ARPC3-203ENST00000467622 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
ARPC3-203ENST00000467622 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
ARPC3-203ENST00000467622 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
ARPC3-203ENST00000467622 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
ARPC3-203ENST00000467622 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
ARPC3-203ENST00000467622 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
ARPC3-203ENST00000467622 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
ARPC3-203ENST00000467622 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
ARPC3-203ENST00000467622 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
ARPC3-203ENST00000467622 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
ARPC3-203ENST00000467622 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
ARPC3-203ENST00000467622 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
ARPC3-203ENST00000467622 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
ARPC3-203ENST00000467622 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
ARPC3-203ENST00000467622 DMRT2Q9Y5R5 561 aa17.34■□□□□ 0.37
ARPC3-203ENST00000467622 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
ARPC3-203ENST00000467622 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
ARPC3-203ENST00000467622 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
ARPC3-203ENST00000467622 CUX2O14529 1486 aa17.14■□□□□ 0.33
ARPC3-203ENST00000467622 NESP48681 1621 aa17.1■□□□□ 0.33
ARPC3-203ENST00000467622 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
ARPC3-203ENST00000467622 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
ARPC3-203ENST00000467622 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
ARPC3-203ENST00000467622 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
ARPC3-203ENST00000467622 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
ARPC3-203ENST00000467622 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
ARPC3-203ENST00000467622 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
ARPC3-203ENST00000467622 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
ARPC3-203ENST00000467622 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
ARPC3-203ENST00000467622 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
ARPC3-203ENST00000467622 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
ARPC3-203ENST00000467622 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
ARPC3-203ENST00000467622 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
ARPC3-203ENST00000467622 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
ARPC3-203ENST00000467622 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
ARPC3-203ENST00000467622 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
ARPC3-203ENST00000467622 WIZO95785 1651 aa16.68■□□□□ 0.26
ARPC3-203ENST00000467622 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
ARPC3-203ENST00000467622 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
ARPC3-203ENST00000467622 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
ARPC3-203ENST00000467622 KCNA4P22459 653 aa16.65■□□□□ 0.26
ARPC3-203ENST00000467622 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
ARPC3-203ENST00000467622 WDR62O43379 1518 aa16.6■□□□□ 0.25
ARPC3-203ENST00000467622 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
ARPC3-203ENST00000467622 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
ARPC3-203ENST00000467622 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
ARPC3-203ENST00000467622 CFTRP13569 1480 aa16.49■□□□□ 0.23
ARPC3-203ENST00000467622 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
ARPC3-203ENST00000467622 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
ARPC3-203ENST00000467622 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
ARPC3-203ENST00000467622 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
ARPC3-203ENST00000467622 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
ARPC3-203ENST00000467622 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
ARPC3-203ENST00000467622 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
ARPC3-203ENST00000467622 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
ARPC3-203ENST00000467622 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
ARPC3-203ENST00000467622 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
ARPC3-203ENST00000467622 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.172e-7■■□□□ 12
ARPC3-203ENST00000467622 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
ARPC3-203ENST00000467622 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
ARPC3-203ENST00000467622 FBLN2P98095 1184 aa16.12■□□□□ 0.17
ARPC3-203ENST00000467622 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
ARPC3-203ENST00000467622 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
ARPC3-203ENST00000467622 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
ARPC3-203ENST00000467622 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
ARPC3-203ENST00000467622 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
ARPC3-203ENST00000467622 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
ARPC3-203ENST00000467622 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
ARPC3-203ENST00000467622 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
ARPC3-203ENST00000467622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■□□□□ 8.5
ARPC3-203ENST00000467622 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
ARPC3-203ENST00000467622 SOGA1O94964 1423 aa16■□□□□ 0.15
ARPC3-203ENST00000467622 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
ARPC3-203ENST00000467622 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
ARPC3-203ENST00000467622 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
ARPC3-203ENST00000467622 CHD1O14646 1710 aa15.96■□□□□ 0.15
ARPC3-203ENST00000467622 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
ARPC3-203ENST00000467622 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
ARPC3-203ENST00000467622 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
ARPC3-203ENST00000467622 CUX1P39880 1505 aa15.9■□□□□ 0.14
ARPC3-203ENST00000467622 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms