RNA–Protein interactions for RNA: ENST00000550231.1

AC144548.2-201, humanhuman

TSL 3 BASIC

Gene AC144548.2, Length 946 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC144548.2-201ENST00000550231 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
AC144548.2-201ENST00000550231 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
AC144548.2-201ENST00000550231 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
AC144548.2-201ENST00000550231 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
AC144548.2-201ENST00000550231 FOXD1Q16676 465 aa20.03■□□□□ 0.8
AC144548.2-201ENST00000550231 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
AC144548.2-201ENST00000550231 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
AC144548.2-201ENST00000550231 ADRA2BP18089 450 aa18.94■□□□□ 0.62
AC144548.2-201ENST00000550231 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
AC144548.2-201ENST00000550231 MSH5O43196 834 aa18.71■□□□□ 0.59
AC144548.2-201ENST00000550231 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
AC144548.2-201ENST00000550231 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
AC144548.2-201ENST00000550231 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
AC144548.2-201ENST00000550231 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
AC144548.2-201ENST00000550231 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
AC144548.2-201ENST00000550231 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
AC144548.2-201ENST00000550231 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
AC144548.2-201ENST00000550231 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
AC144548.2-201ENST00000550231 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
AC144548.2-201ENST00000550231 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
AC144548.2-201ENST00000550231 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
AC144548.2-201ENST00000550231 KCNA4P22459 653 aa16.45■□□□□ 0.22
AC144548.2-201ENST00000550231 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
AC144548.2-201ENST00000550231 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
AC144548.2-201ENST00000550231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.148e-7■■□□□ 13.6
AC144548.2-201ENST00000550231 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
AC144548.2-201ENST00000550231 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
AC144548.2-201ENST00000550231 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
AC144548.2-201ENST00000550231 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
AC144548.2-201ENST00000550231 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
AC144548.2-201ENST00000550231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
AC144548.2-201ENST00000550231 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
AC144548.2-201ENST00000550231 APLP2Q06481 763 aa15.32■□□□□ 0.04
AC144548.2-201ENST00000550231 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
AC144548.2-201ENST00000550231 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
AC144548.2-201ENST00000550231 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
AC144548.2-201ENST00000550231 CAPN15O75808 1086 aa15.24■□□□□ 0.03
AC144548.2-201ENST00000550231 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
AC144548.2-201ENST00000550231 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
AC144548.2-201ENST00000550231 ZBTB22O15209 634 aa15.09■□□□□ 0.01
AC144548.2-201ENST00000550231 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
AC144548.2-201ENST00000550231 DSG3P32926 999 aa15.04■□□□□ -0
AC144548.2-201ENST00000550231 ABCB7O75027 752 aa14.88□□□□□ -0.03
AC144548.2-201ENST00000550231 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
AC144548.2-201ENST00000550231 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
AC144548.2-201ENST00000550231 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
AC144548.2-201ENST00000550231 POLA2Q14181 598 aa14.73□□□□□ -0.05
AC144548.2-201ENST00000550231 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
AC144548.2-201ENST00000550231 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
AC144548.2-201ENST00000550231 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
AC144548.2-201ENST00000550231 FBLN2P98095 1184 aa14.33□□□□□ -0.12
AC144548.2-201ENST00000550231 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
AC144548.2-201ENST00000550231 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
AC144548.2-201ENST00000550231 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
AC144548.2-201ENST00000550231 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
AC144548.2-201ENST00000550231 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
AC144548.2-201ENST00000550231 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
AC144548.2-201ENST00000550231 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
AC144548.2-201ENST00000550231 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
AC144548.2-201ENST00000550231 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
AC144548.2-201ENST00000550231 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
AC144548.2-201ENST00000550231 POTEHQ6S545 545 aa13.88□□□□□ -0.19
AC144548.2-201ENST00000550231 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
AC144548.2-201ENST00000550231 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
AC144548.2-201ENST00000550231 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC144548.2-201ENST00000550231 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
AC144548.2-201ENST00000550231 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
AC144548.2-201ENST00000550231 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
AC144548.2-201ENST00000550231 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC144548.2-201ENST00000550231 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
AC144548.2-201ENST00000550231 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
AC144548.2-201ENST00000550231 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
AC144548.2-201ENST00000550231 PROM2Q8N271 834 aa13.43□□□□□ -0.26
AC144548.2-201ENST00000550231 FKBP8Q14318 412 aa13.38□□□□□ -0.27
AC144548.2-201ENST00000550231 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
AC144548.2-201ENST00000550231 HAX1O00165 279 aa13.32□□□□□ -0.28
AC144548.2-201ENST00000550231 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
AC144548.2-201ENST00000550231 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
AC144548.2-201ENST00000550231 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
AC144548.2-201ENST00000550231 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
AC144548.2-201ENST00000550231 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
AC144548.2-201ENST00000550231 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC144548.2-201ENST00000550231 EVX2Q03828 476 aa13.08□□□□□ -0.32
AC144548.2-201ENST00000550231 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
AC144548.2-201ENST00000550231 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
AC144548.2-201ENST00000550231 MIER1Q8N108 512 aa13.06□□□□□ -0.32
AC144548.2-201ENST00000550231 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
AC144548.2-201ENST00000550231 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
AC144548.2-201ENST00000550231 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
AC144548.2-201ENST00000550231 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
AC144548.2-201ENST00000550231 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
AC144548.2-201ENST00000550231 CLCN6P51797 869 aa12.91□□□□□ -0.34
AC144548.2-201ENST00000550231 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
AC144548.2-201ENST00000550231 GABBR2O75899 941 aa12.88□□□□□ -0.35
AC144548.2-201ENST00000550231 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
AC144548.2-201ENST00000550231 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
AC144548.2-201ENST00000550231 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
AC144548.2-201ENST00000550231 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
AC144548.2-201ENST00000550231 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
AC144548.2-201ENST00000550231 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms