Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KLF3-AS1-206ENST00000610668 685 ntTSL 213.81□□□□□ -0.23e-6■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.261e-6■■■□□ 18.6
XRN2Q9H0D6 WAC-204ENST00000375646 2176 ntTSL 5 BASIC13.37□□□□□ -0.271e-9■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.381e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.425e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-218ENST00000490289 628 ntTSL 311.91□□□□□ -0.55e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-217ENST00000486653 563 ntTSL 411.69□□□□□ -0.545e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC10.75□□□□□ -0.695e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.84□□□□□ -0.995e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-211ENST00000467839 566 ntTSL 28.57□□□□□ -1.045e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)8.53□□□□□ -1.045e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.4□□□□□ -1.065e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.7□□□□□ -1.185e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-208ENST00000432266 569 ntTSL 46.98□□□□□ -1.295e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.84□□□□□ -1.315e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-216ENST00000483534 1155 ntTSL 1 (best)6.69□□□□□ -1.345e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-219ENST00000490555 549 ntTSL 46.32□□□□□ -1.45e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-210ENST00000462217 1095 ntTSL 55.85□□□□□ -1.475e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-221ENST00000493090 563 ntTSL 45.64□□□□□ -1.515e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-209ENST00000461960 649 ntTSL 55.05□□□□□ -1.65e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-213ENST00000470565 728 ntTSL 34.64□□□□□ -1.675e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-220ENST00000492371 535 ntTSL 33.97□□□□□ -1.775e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-214ENST00000472923 421 ntTSL 53.36□□□□□ -1.875e-6■■■□□ 18.6
XRN2Q9H0D6 ARHGAP27P1-BPTFP1-KPNA2P3-202ENST00000579125 1318 ntTSL 1 (best)25.83■■□□□ 1.731e-6■■■□□ 18.6
XRN2Q9H0D6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.9□□□□□ -0.021e-6■■■□□ 18.6
XRN2Q9H0D6 EGFL7-206ENST00000492002 654 ntTSL 528.39■■■□□ 2.144e-8■■■□□ 18.6
XRN2Q9H0D6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.44e-8■■■□□ 18.6
XRN2Q9H0D6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.51■■□□□ 1.671e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-205ENST00000586817 2441 ntTSL 222.21■■□□□ 1.151e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-209ENST00000591767 1214 ntTSL 221.19■□□□□ 0.981e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-206ENST00000589737 1105 ntTSL 218.56■□□□□ 0.561e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-201ENST00000215587 1286 ntTSL 318.34■□□□□ 0.531e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.011e-6■■■□□ 18.6
XRN2Q9H0D6 POLR2E-202ENST00000585838 487 ntTSL 511.85□□□□□ -0.511e-6■■■□□ 18.6
XRN2Q9H0D6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.183e-6■■■□□ 18.6
XRN2Q9H0D6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.13e-6■■■□□ 18.6
XRN2Q9H0D6 PTMA-206ENST00000412128 863 ntTSL 329.43■■■□□ 2.33e-6■■■□□ 18.6
XRN2Q9H0D6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.32■■□□□ 1.83e-6■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-212ENST00000600231 2534 ntTSL 221.96■■□□□ 1.115e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 15e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.265e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.24■□□□□ 0.195e-9■■■□□ 18.6
XRN2Q9H0D6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.165e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.73■□□□□ 0.115e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-206ENST00000598073 582 ntTSL 313.31□□□□□ -0.285e-9■■■□□ 18.6
XRN2Q9H0D6 GRAMD1A-204ENST00000594597 567 ntTSL 412.32□□□□□ -0.445e-9■■■□□ 18.6
XRN2Q9H0D6 PLXNB2-205ENST00000432455 1620 ntTSL 520.26■□□□□ 0.832e-7■■■□□ 18.6
XRN2Q9H0D6 SP3-207ENST00000490182 459 ntTSL 422.34■■□□□ 1.176e-7■■■□□ 18.6
XRN2Q9H0D6 AP1G2-231ENST00000557189 678 ntTSL 219.5■□□□□ 0.718e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-207ENST00000553685 561 ntTSL 1 (best)18.6■□□□□ 0.578e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-223ENST00000556277 891 ntTSL 518.38■□□□□ 0.538e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-225ENST00000556743 1456 ntTSL 1 (best)18.11■□□□□ 0.498e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-206ENST00000553629 1301 ntTSL 1 (best)17.36■□□□□ 0.378e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-226ENST00000556843 562 ntTSL 417.09■□□□□ 0.338e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-234ENST00000557619 1004 ntTSL 215.47■□□□□ 0.078e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-208ENST00000553756 656 ntTSL 315.42■□□□□ 0.068e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-227ENST00000556943 747 ntTSL 314.23□□□□□ -0.138e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.158e-8■■■□□ 18.6
XRN2Q9H0D6 SP3-204ENST00000462904 535 ntTSL 413.42□□□□□ -0.266e-7■■■□□ 18.6
XRN2Q9H0D6 AP1G2-203ENST00000460049 2672 ntTSL 1 (best)12.44□□□□□ -0.428e-8■■■□□ 18.6
XRN2Q9H0D6 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.558e-8■■■□□ 18.6
XRN2Q9H0D6 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.616e-7■■■□□ 18.6
XRN2Q9H0D6 ZBTB1-205ENST00000556818 453 ntTSL 421.98■■□□□ 1.113e-6■■■□□ 18.5
XRN2Q9H0D6 ZBTB1-202ENST00000553583 582 ntTSL 318.32■□□□□ 0.523e-6■■■□□ 18.5
XRN2Q9H0D6 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■■□□ 18.5
XRN2Q9H0D6 ZBTB1-206ENST00000556965 509 ntTSL 43.38□□□□□ -1.873e-6■■■□□ 18.5
XRN2Q9H0D6 PCK2-204ENST00000557969 525 ntTSL 218.94■□□□□ 0.624e-22■■■□□ 18.5
XRN2Q9H0D6 C9orf16-203ENST00000489240 573 ntTSL 320.26■□□□□ 0.834e-8■■■□□ 18.5
XRN2Q9H0D6 C9orf16-204ENST00000492588 1570 ntTSL 519.44■□□□□ 0.74e-8■■■□□ 18.5
XRN2Q9H0D6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.464e-8■■■□□ 18.5
XRN2Q9H0D6 C9orf16-202ENST00000486420 434 ntTSL 514.25□□□□□ -0.134e-8■■■□□ 18.5
XRN2Q9H0D6 FLOT1-211ENST00000484693 1001 ntTSL 223.39■■□□□ 1.338e-8■■■□□ 18.5
XRN2Q9H0D6 F7-203ENST00000444337 564 ntTSL 523.7■■□□□ 1.383e-6■■■□□ 18.5
XRN2Q9H0D6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■■□□ 18.5
XRN2Q9H0D6 F7-206ENST00000541084 2873 ntTSL 2 BASIC11.31□□□□□ -0.63e-6■■■□□ 18.5
XRN2Q9H0D6 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.753e-6■■■□□ 18.5
XRN2Q9H0D6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.441e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.45■□□□□ 0.222e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.132e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.83■□□□□ 0.122e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.122e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.51■□□□□ 0.072e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)14.4□□□□□ -0.12e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.19□□□□□ -0.32e-7■■■□□ 18.5
XRN2Q9H0D6 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.3□□□□□ -1.083e-6■■■□□ 18.5
XRN2Q9H0D6 FLOT1-212ENST00000487376 1583 ntTSL 520.7■□□□□ 0.93e-7■■■□□ 18.5
XRN2Q9H0D6 FLOT1-209ENST00000476729 562 ntTSL 218.68■□□□□ 0.583e-7■■■□□ 18.5
XRN2Q9H0D6 MZF1-AS1-203ENST00000600726 559 ntTSL 416.03■□□□□ 0.168e-7■■■□□ 18.5
XRN2Q9H0D6 EIF4G1-228ENST00000456033 694 ntTSL 513.57□□□□□ -0.244e-10■■■□□ 18.5
XRN2Q9H0D6 MZF1-AS1-201ENST00000593642 565 ntTSL 313.16□□□□□ -0.38e-7■■■□□ 18.5
XRN2Q9H0D6 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.69□□□□□ -0.388e-7■■■□□ 18.5
XRN2Q9H0D6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.424e-6■■■□□ 18.5
XRN2Q9H0D6 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.494e-6■■■□□ 18.5
XRN2Q9H0D6 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.574e-6■■■□□ 18.5
XRN2Q9H0D6 SOD1-203ENST00000470944 1746 ntTSL 232.41■■■□□ 2.786e-7■■■□□ 18.5
XRN2Q9H0D6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.566e-7■■■□□ 18.5
XRN2Q9H0D6 SOD1-204ENST00000476106 586 ntTSL 515.82■□□□□ 0.126e-7■■■□□ 18.5
XRN2Q9H0D6 SOD1-202ENST00000389995 865 ntTSL 3 BASIC14.82□□□□□ -0.046e-7■■■□□ 18.5
XRN2Q9H0D6 SCMH1-215ENST00000488592 363 ntTSL 215.17■□□□□ 0.024e-10■■■□□ 18.5
XRN2Q9H0D6 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC10.49□□□□□ -0.734e-10■■■□□ 18.5
Retrieved 100 of 21,068 protein–RNA pairs in 108.4 ms