RNA–Protein interactions for RNA: ENST00000586817.5

POLR2E-205, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 2,441 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-205ENST00000586817 NISCHQ9Y2I1 1504 aa46.32■■■■■ 5.01
POLR2E-205ENST00000586817 SHROOM4Q9ULL8 1493 aa40.09■■■■■ 4.01
POLR2E-205ENST00000586817 SUPT5HO00267 1087 aaKnown RBP39.4■■■■□ 3.9
POLR2E-205ENST00000586817 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
POLR2E-205ENST00000586817 ZCCHC6Q5VYS8 1495 aaKnown RBP39.2■■■■□ 3.87
POLR2E-205ENST00000586817 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
POLR2E-205ENST00000586817 ABCC9O60706 1549 aa38.73■■■■□ 3.79
POLR2E-205ENST00000586817 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
POLR2E-205ENST00000586817 CHIC1Q5VXU3 224 aa38.28■■■■□ 3.72
POLR2E-205ENST00000586817 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
POLR2E-205ENST00000586817 HRCP23327 699 aa37.5■■■■□ 3.59
POLR2E-205ENST00000586817 PCGF6Q9BYE7 350 aa37.49■■■■□ 3.59
POLR2E-205ENST00000586817 LOC105371045A0A1W2PR82 267 aa37.34■■■■□ 3.57
POLR2E-205ENST00000586817 SCRIBQ14160 1630 aa37■■■■□ 3.51
POLR2E-205ENST00000586817 PPARGC1BQ86YN6 1023 aaKnown RBP36.97■■■■□ 3.51
POLR2E-205ENST00000586817 RB1CC1Q8TDY2 1594 aa36.96■■■■□ 3.51
POLR2E-205ENST00000586817 NACADO15069 1562 aa36.92■■■■□ 3.5
POLR2E-205ENST00000586817 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
POLR2E-205ENST00000586817 TRIM41Q8WV44 630 aa36.53■■■■□ 3.44
POLR2E-205ENST00000586817 TRIM26Q12899 539 aaPredicted RBP36.51■■■■□ 3.44
POLR2E-205ENST00000586817 FAM9AQ8IZU1 332 aaPredicted RBP36.47■■■■□ 3.43
POLR2E-205ENST00000586817 PABPN1Q86U42 306 aaKnown RBP eCLIP36.44■■■■□ 3.42
POLR2E-205ENST00000586817 EHMT2Q96KQ7 1210 aa36.34■■■■□ 3.41
POLR2E-205ENST00000586817 CECR2Q9BXF3 1484 aa36.3■■■■□ 3.4
POLR2E-205ENST00000586817 UNC13AQ9UPW8 1703 aa36.26■■■■□ 3.4
POLR2E-205ENST00000586817 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
POLR2E-205ENST00000586817 BICRAQ9NZM4 1560 aa36■■■■□ 3.35
POLR2E-205ENST00000586817 WIZO95785 1651 aa35.98■■■■□ 3.35
POLR2E-205ENST00000586817 ZEB1P37275 1124 aaPredicted RBP35.67■■■■□ 3.3
POLR2E-205ENST00000586817 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
POLR2E-205ENST00000586817 PELP1Q8IZL8 1130 aaKnown RBP35.56■■■■□ 3.28
POLR2E-205ENST00000586817 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
POLR2E-205ENST00000586817 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
POLR2E-205ENST00000586817 ABCC8Q09428 1581 aa35.35■■■■□ 3.25
POLR2E-205ENST00000586817 TOP2AP11388 1531 aaKnown RBP35.25■■■■□ 3.23
POLR2E-205ENST00000586817 CCDC88BA6NC98 1476 aa35.25■■■■□ 3.23
POLR2E-205ENST00000586817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.23■■■■□ 3.23
POLR2E-205ENST00000586817 SMARCA4P51532 1647 aa35.22■■■■□ 3.23
POLR2E-205ENST00000586817 TTBK1Q5TCY1 1321 aaPredicted RBP35.19■■■■□ 3.22
POLR2E-205ENST00000586817 SMARCA2P51531 1590 aa35.14■■■■□ 3.22
POLR2E-205ENST00000586817 SOGA1O94964 1423 aa35.07■■■■□ 3.2
POLR2E-205ENST00000586817 CCER1Q8TC90 406 aaPredicted RBP35.04■■■■□ 3.2
POLR2E-205ENST00000586817 CEP162Q5TB80 1403 aa34.93■■■■□ 3.18
POLR2E-205ENST00000586817 RUSC2Q8N2Y8 1516 aa34.92■■■■□ 3.18
POLR2E-205ENST00000586817 CC2D2AQ9P2K1 1620 aa34.85■■■■□ 3.17
POLR2E-205ENST00000586817 SCAF1Q9H7N4 1312 aaKnown RBP34.83■■■■□ 3.17
POLR2E-205ENST00000586817 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
POLR2E-205ENST00000586817 UBTFP17480 764 aaKnown RBP34.81■■■■□ 3.16
POLR2E-205ENST00000586817 CSRNP3Q8WYN3 585 aa34.8■■■■□ 3.16
POLR2E-205ENST00000586817 TNIKQ9UKE5 1360 aa34.77■■■■□ 3.16
POLR2E-205ENST00000586817 EEA1Q15075 1411 aa34.6■■■■□ 3.13
POLR2E-205ENST00000586817 GOLGA3Q08378 1498 aa34.53■■■■□ 3.12
POLR2E-205ENST00000586817 DIEXFQ68CQ4 756 aaKnown RBP34.46■■■■□ 3.11
POLR2E-205ENST00000586817 SYNJ1O43426 1573 aa34.45■■■■□ 3.1
POLR2E-205ENST00000586817 MYT1Q01538 1121 aa34.42■■■■□ 3.1
POLR2E-205ENST00000586817 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
POLR2E-205ENST00000586817 NEUROD1Q13562 356 aa34.36■■■■□ 3.09
POLR2E-205ENST00000586817 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
POLR2E-205ENST00000586817 ACIN1Q9UKV3 1341 aaKnown RBP34.31■■■■□ 3.08
POLR2E-205ENST00000586817 RANGAP1P46060 587 aaPredicted RBP34.31■■■■□ 3.08
POLR2E-205ENST00000586817 CEP164Q9UPV0 1460 aa34.28■■■■□ 3.08
POLR2E-205ENST00000586817 HNRNPUL2Q1KMD3 747 aaKnown RBP34.28■■■■□ 3.08
POLR2E-205ENST00000586817 BAZ1BQ9UIG0 1483 aaKnown RBP34.23■■■■□ 3.07
POLR2E-205ENST00000586817 CLIP1P30622 1438 aa34.22■■■■□ 3.07
POLR2E-205ENST00000586817 KIF21BO75037 1637 aa34.19■■■■□ 3.06
POLR2E-205ENST00000586817 NCAPD3P42695 1498 aa34.18■■■■□ 3.06
POLR2E-205ENST00000586817 RAPGEF2Q9Y4G8 1499 aa34.15■■■■□ 3.06
POLR2E-205ENST00000586817 ZNF316A6NFI3 1004 aaPredicted RBP34.09■■■■□ 3.05
POLR2E-205ENST00000586817 VPS8Q8N3P4 1428 aa34.05■■■■□ 3.04
POLR2E-205ENST00000586817 GTF3C3Q9Y5Q9 886 aa34.02■■■■□ 3.04
POLR2E-205ENST00000586817 CENPBP07199 599 aaPredicted RBP33.99■■■■□ 3.03
POLR2E-205ENST00000586817 APLP2Q06481 763 aa33.99■■■■□ 3.03
POLR2E-205ENST00000586817 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
POLR2E-205ENST00000586817 TOP2BQ02880 1626 aa33.88■■■■□ 3.01
POLR2E-205ENST00000586817 YTHDC1Q96MU7 727 aaKnown RBP33.87■■■■□ 3.01
POLR2E-205ENST00000586817 MIER1Q8N108 512 aa33.77■■■■□ 3
POLR2E-205ENST00000586817 BIVM-ERCC5R4GMW8 1640 aa33.7■■■□□ 2.99
POLR2E-205ENST00000586817 KANK4Q5T7N3 995 aaPredicted RBP33.66■■■□□ 2.98
POLR2E-205ENST00000586817 PRXQ9BXM0 1461 aa33.65■■■□□ 2.98
POLR2E-205ENST00000586817 ARAP1Q96P48 1450 aa33.64■■■□□ 2.98
POLR2E-205ENST00000586817 NESP48681 1621 aa33.63■■■□□ 2.97
POLR2E-205ENST00000586817 CUX1P39880 1505 aa33.59■■■□□ 2.97
POLR2E-205ENST00000586817 ERICH3Q5RHP9 1530 aa33.57■■■□□ 2.96
POLR2E-205ENST00000586817 DHX57Q6P158 1386 aaKnown RBP33.47■■■□□ 2.95
POLR2E-205ENST00000586817 KIF27Q86VH2 1401 aa33.44■■■□□ 2.94
POLR2E-205ENST00000586817 CFTRP13569 1480 aa33.34■■■□□ 2.93
POLR2E-205ENST00000586817 ITGAEP38570 1179 aa33.34■■■□□ 2.93
POLR2E-205ENST00000586817 ARHGAP35Q9NRY4 1499 aa33.31■■■□□ 2.92
POLR2E-205ENST00000586817 CADPSQ9ULU8 1353 aa33.31■■■□□ 2.92
POLR2E-205ENST00000586817 RRBP1Q9P2E9 1410 aaKnown RBP33.26■■■□□ 2.91
POLR2E-205ENST00000586817 CLSPNQ9HAW4 1339 aa33.24■■■□□ 2.91
POLR2E-205ENST00000586817 ERCC6Q03468 1493 aa33.23■■■□□ 2.91
POLR2E-205ENST00000586817 CCNB3Q8WWL7 1395 aa33.19■■■□□ 2.9
POLR2E-205ENST00000586817 CUX2O14529 1486 aa33.17■■■□□ 2.9
POLR2E-205ENST00000586817 LAMC3Q9Y6N6 1575 aa33.16■■■□□ 2.9
POLR2E-205ENST00000586817 IGF1RP08069 1367 aa33.13■■■□□ 2.89
POLR2E-205ENST00000586817 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
POLR2E-205ENST00000586817 KIF21AQ7Z4S6 1674 aa33.02■■■□□ 2.88
POLR2E-205ENST00000586817 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
POLR2E-205ENST00000586817 P3H3Q8IVL6 736 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms