RNA–Protein interactions for RNA: ENST00000396593.6

CARHSP1-202, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-202ENST00000396593 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
CARHSP1-202ENST00000396593 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
CARHSP1-202ENST00000396593 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
CARHSP1-202ENST00000396593 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
CARHSP1-202ENST00000396593 PELP1Q8IZL8 1130 aaKnown RBP22.38■■□□□ 1.17
CARHSP1-202ENST00000396593 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
CARHSP1-202ENST00000396593 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
CARHSP1-202ENST00000396593 MYT1Q01538 1121 aa21.82■■□□□ 1.08
CARHSP1-202ENST00000396593 ABCC9O60706 1549 aa21.7■■□□□ 1.06
CARHSP1-202ENST00000396593 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
CARHSP1-202ENST00000396593 HRCP23327 699 aa21.52■■□□□ 1.04
CARHSP1-202ENST00000396593 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
CARHSP1-202ENST00000396593 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
CARHSP1-202ENST00000396593 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
CARHSP1-202ENST00000396593 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
CARHSP1-202ENST00000396593 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
CARHSP1-202ENST00000396593 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
CARHSP1-202ENST00000396593 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
CARHSP1-202ENST00000396593 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
CARHSP1-202ENST00000396593 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
CARHSP1-202ENST00000396593 NACADO15069 1562 aa20.92■□□□□ 0.94
CARHSP1-202ENST00000396593 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
CARHSP1-202ENST00000396593 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
CARHSP1-202ENST00000396593 RSF1Q96T23 1441 aaPredicted RBP20.84■□□□□ 0.93
CARHSP1-202ENST00000396593 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
CARHSP1-202ENST00000396593 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
CARHSP1-202ENST00000396593 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
CARHSP1-202ENST00000396593 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
CARHSP1-202ENST00000396593 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
CARHSP1-202ENST00000396593 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
CARHSP1-202ENST00000396593 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
CARHSP1-202ENST00000396593 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
CARHSP1-202ENST00000396593 WIZO95785 1651 aa20.34■□□□□ 0.85
CARHSP1-202ENST00000396593 BICRAQ9NZM4 1560 aa20.27■□□□□ 0.84
CARHSP1-202ENST00000396593 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
CARHSP1-202ENST00000396593 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
CARHSP1-202ENST00000396593 GTF3C3Q9Y5Q9 886 aa20.05■□□□□ 0.8
CARHSP1-202ENST00000396593 NEUROD1Q13562 356 aa20.04■□□□□ 0.8
CARHSP1-202ENST00000396593 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
CARHSP1-202ENST00000396593 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
CARHSP1-202ENST00000396593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
CARHSP1-202ENST00000396593 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
CARHSP1-202ENST00000396593 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
CARHSP1-202ENST00000396593 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
CARHSP1-202ENST00000396593 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
CARHSP1-202ENST00000396593 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
CARHSP1-202ENST00000396593 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
CARHSP1-202ENST00000396593 SOGA1O94964 1423 aa19.89■□□□□ 0.77
CARHSP1-202ENST00000396593 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
CARHSP1-202ENST00000396593 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
CARHSP1-202ENST00000396593 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
CARHSP1-202ENST00000396593 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
CARHSP1-202ENST00000396593 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
CARHSP1-202ENST00000396593 APLP2Q06481 763 aa19.77■□□□□ 0.76
CARHSP1-202ENST00000396593 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
CARHSP1-202ENST00000396593 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
CARHSP1-202ENST00000396593 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
CARHSP1-202ENST00000396593 ANP32EQ9BTT0 268 aa19.6■□□□□ 0.73
CARHSP1-202ENST00000396593 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.73
CARHSP1-202ENST00000396593 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.73
CARHSP1-202ENST00000396593 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
CARHSP1-202ENST00000396593 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
CARHSP1-202ENST00000396593 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
CARHSP1-202ENST00000396593 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
CARHSP1-202ENST00000396593 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
CARHSP1-202ENST00000396593 EEA1Q15075 1411 aa19.44■□□□□ 0.7
CARHSP1-202ENST00000396593 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
CARHSP1-202ENST00000396593 CLIP1P30622 1438 aa19.38■□□□□ 0.69
CARHSP1-202ENST00000396593 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
CARHSP1-202ENST00000396593 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
CARHSP1-202ENST00000396593 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
CARHSP1-202ENST00000396593 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
CARHSP1-202ENST00000396593 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
CARHSP1-202ENST00000396593 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
CARHSP1-202ENST00000396593 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
CARHSP1-202ENST00000396593 ITGAEP38570 1179 aa19.2■□□□□ 0.66
CARHSP1-202ENST00000396593 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
CARHSP1-202ENST00000396593 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.65
CARHSP1-202ENST00000396593 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
CARHSP1-202ENST00000396593 KIF21BO75037 1637 aa19.11■□□□□ 0.65
CARHSP1-202ENST00000396593 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
CARHSP1-202ENST00000396593 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
CARHSP1-202ENST00000396593 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
CARHSP1-202ENST00000396593 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
CARHSP1-202ENST00000396593 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
CARHSP1-202ENST00000396593 CUX1P39880 1505 aa19.02■□□□□ 0.64
CARHSP1-202ENST00000396593 KIF27Q86VH2 1401 aa19.01■□□□□ 0.63
CARHSP1-202ENST00000396593 MIER1Q8N108 512 aa18.98■□□□□ 0.63
CARHSP1-202ENST00000396593 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
CARHSP1-202ENST00000396593 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
CARHSP1-202ENST00000396593 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
CARHSP1-202ENST00000396593 CUX2O14529 1486 aa18.93■□□□□ 0.62
CARHSP1-202ENST00000396593 CFTRP13569 1480 aa18.91■□□□□ 0.62
CARHSP1-202ENST00000396593 NESP48681 1621 aa18.91■□□□□ 0.62
CARHSP1-202ENST00000396593 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
CARHSP1-202ENST00000396593 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
CARHSP1-202ENST00000396593 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
CARHSP1-202ENST00000396593 IGF1RP08069 1367 aa18.83■□□□□ 0.61
CARHSP1-202ENST00000396593 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
CARHSP1-202ENST00000396593 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms