RNA–Protein interactions for RNA: ENST00000594597.5

GRAMD1A-204, Transcript of GRAM domain containing 1A, humanhuman

TSL 4

Gene GRAMD1A, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-204ENST00000594597 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.65
GRAMD1A-204ENST00000594597 ABCC9O60706 1549 aa23■■□□□ 1.27
GRAMD1A-204ENST00000594597 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
GRAMD1A-204ENST00000594597 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
GRAMD1A-204ENST00000594597 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
GRAMD1A-204ENST00000594597 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
GRAMD1A-204ENST00000594597 NACADO15069 1562 aa21.48■■□□□ 1.03
GRAMD1A-204ENST00000594597 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.012e-14■■□□□ 11.6
GRAMD1A-204ENST00000594597 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
GRAMD1A-204ENST00000594597 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
GRAMD1A-204ENST00000594597 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
GRAMD1A-204ENST00000594597 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
GRAMD1A-204ENST00000594597 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
GRAMD1A-204ENST00000594597 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
GRAMD1A-204ENST00000594597 SHROOM4Q9ULL8 1493 aa20.78■□□□□ 0.92
GRAMD1A-204ENST00000594597 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
GRAMD1A-204ENST00000594597 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
GRAMD1A-204ENST00000594597 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
GRAMD1A-204ENST00000594597 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
GRAMD1A-204ENST00000594597 CUX2O14529 1486 aa20.18■□□□□ 0.82
GRAMD1A-204ENST00000594597 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
GRAMD1A-204ENST00000594597 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
GRAMD1A-204ENST00000594597 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
GRAMD1A-204ENST00000594597 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
GRAMD1A-204ENST00000594597 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
GRAMD1A-204ENST00000594597 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
GRAMD1A-204ENST00000594597 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
GRAMD1A-204ENST00000594597 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
GRAMD1A-204ENST00000594597 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
GRAMD1A-204ENST00000594597 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
GRAMD1A-204ENST00000594597 NESP48681 1621 aa19.45■□□□□ 0.7
GRAMD1A-204ENST00000594597 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
GRAMD1A-204ENST00000594597 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
GRAMD1A-204ENST00000594597 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
GRAMD1A-204ENST00000594597 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
GRAMD1A-204ENST00000594597 WIZO95785 1651 aa19.24■□□□□ 0.67
GRAMD1A-204ENST00000594597 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
GRAMD1A-204ENST00000594597 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
GRAMD1A-204ENST00000594597 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
GRAMD1A-204ENST00000594597 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
GRAMD1A-204ENST00000594597 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
GRAMD1A-204ENST00000594597 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
GRAMD1A-204ENST00000594597 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
GRAMD1A-204ENST00000594597 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
GRAMD1A-204ENST00000594597 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
GRAMD1A-204ENST00000594597 CFTRP13569 1480 aa18.97■□□□□ 0.63
GRAMD1A-204ENST00000594597 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
GRAMD1A-204ENST00000594597 WDR62O43379 1518 aa18.94■□□□□ 0.62
GRAMD1A-204ENST00000594597 RIMBP3CA6NJZ7 1639 aa18.93■□□□□ 0.62
GRAMD1A-204ENST00000594597 RIMBP3BA6NNM3 1639 aa18.93■□□□□ 0.62
GRAMD1A-204ENST00000594597 RIMBP3Q9UFD9 1639 aa18.93■□□□□ 0.62
GRAMD1A-204ENST00000594597 FANCD2Q9BXW9 1451 aa18.93■□□□□ 0.62
GRAMD1A-204ENST00000594597 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
GRAMD1A-204ENST00000594597 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
GRAMD1A-204ENST00000594597 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
GRAMD1A-204ENST00000594597 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
GRAMD1A-204ENST00000594597 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
GRAMD1A-204ENST00000594597 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
GRAMD1A-204ENST00000594597 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
GRAMD1A-204ENST00000594597 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
GRAMD1A-204ENST00000594597 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
GRAMD1A-204ENST00000594597 ARAP1Q96P48 1450 aa18.56■□□□□ 0.56
GRAMD1A-204ENST00000594597 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
GRAMD1A-204ENST00000594597 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
GRAMD1A-204ENST00000594597 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
GRAMD1A-204ENST00000594597 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
GRAMD1A-204ENST00000594597 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
GRAMD1A-204ENST00000594597 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
GRAMD1A-204ENST00000594597 SOGA1O94964 1423 aa18.33■□□□□ 0.53
GRAMD1A-204ENST00000594597 FBLN2P98095 1184 aa18.33■□□□□ 0.52
GRAMD1A-204ENST00000594597 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
GRAMD1A-204ENST00000594597 CUX1P39880 1505 aa18.28■□□□□ 0.52
GRAMD1A-204ENST00000594597 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.513e-7■■■■■ 75.9
GRAMD1A-204ENST00000594597 CHD1O14646 1710 aa18.24■□□□□ 0.51
GRAMD1A-204ENST00000594597 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
GRAMD1A-204ENST00000594597 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
GRAMD1A-204ENST00000594597 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
GRAMD1A-204ENST00000594597 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
GRAMD1A-204ENST00000594597 ABCA10Q8WWZ4 1543 aa18.15■□□□□ 0.5
GRAMD1A-204ENST00000594597 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.59e-6■■■■■ 50.1
GRAMD1A-204ENST00000594597 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.5
GRAMD1A-204ENST00000594597 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
GRAMD1A-204ENST00000594597 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
GRAMD1A-204ENST00000594597 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
GRAMD1A-204ENST00000594597 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
GRAMD1A-204ENST00000594597 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
GRAMD1A-204ENST00000594597 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
GRAMD1A-204ENST00000594597 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
GRAMD1A-204ENST00000594597 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
GRAMD1A-204ENST00000594597 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.48
GRAMD1A-204ENST00000594597 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
GRAMD1A-204ENST00000594597 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
GRAMD1A-204ENST00000594597 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
GRAMD1A-204ENST00000594597 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
GRAMD1A-204ENST00000594597 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
GRAMD1A-204ENST00000594597 NUP160Q12769 1436 aa17.85■□□□□ 0.45
GRAMD1A-204ENST00000594597 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
GRAMD1A-204ENST00000594597 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
GRAMD1A-204ENST00000594597 CUL7Q14999 1698 aa17.8■□□□□ 0.44
GRAMD1A-204ENST00000594597 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms