RNA–Protein interactions for RNA: ENST00000462904.1

SP3-204, Transcript of Sp3 transcription factor, humanhuman

TSL 4

Gene SP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-204ENST00000462904 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
SP3-204ENST00000462904 ABCC9O60706 1549 aa25.33■■□□□ 1.65
SP3-204ENST00000462904 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
SP3-204ENST00000462904 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
SP3-204ENST00000462904 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
SP3-204ENST00000462904 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
SP3-204ENST00000462904 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
SP3-204ENST00000462904 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
SP3-204ENST00000462904 NACADO15069 1562 aa23.42■■□□□ 1.34
SP3-204ENST00000462904 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
SP3-204ENST00000462904 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
SP3-204ENST00000462904 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
SP3-204ENST00000462904 DNAJC5Q9H3Z4 198 aa22.93■■□□□ 1.26
SP3-204ENST00000462904 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
SP3-204ENST00000462904 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
SP3-204ENST00000462904 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
SP3-204ENST00000462904 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
SP3-204ENST00000462904 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
SP3-204ENST00000462904 SCRIBQ14160 1630 aa22.39■■□□□ 1.18
SP3-204ENST00000462904 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
SP3-204ENST00000462904 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
SP3-204ENST00000462904 CUX2O14529 1486 aa22.12■■□□□ 1.13
SP3-204ENST00000462904 ERCC6Q03468 1493 aa21.96■■□□□ 1.11
SP3-204ENST00000462904 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
SP3-204ENST00000462904 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
SP3-204ENST00000462904 NESP48681 1621 aa21.53■■□□□ 1.04
SP3-204ENST00000462904 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
SP3-204ENST00000462904 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
SP3-204ENST00000462904 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
SP3-204ENST00000462904 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
SP3-204ENST00000462904 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
SP3-204ENST00000462904 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
SP3-204ENST00000462904 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
SP3-204ENST00000462904 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
SP3-204ENST00000462904 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
SP3-204ENST00000462904 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
SP3-204ENST00000462904 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
SP3-204ENST00000462904 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
SP3-204ENST00000462904 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
SP3-204ENST00000462904 WDR62O43379 1518 aa21■□□□□ 0.95
SP3-204ENST00000462904 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
SP3-204ENST00000462904 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
SP3-204ENST00000462904 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
SP3-204ENST00000462904 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
SP3-204ENST00000462904 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
SP3-204ENST00000462904 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
SP3-204ENST00000462904 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
SP3-204ENST00000462904 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
SP3-204ENST00000462904 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
SP3-204ENST00000462904 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
SP3-204ENST00000462904 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
SP3-204ENST00000462904 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
SP3-204ENST00000462904 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
SP3-204ENST00000462904 CFTRP13569 1480 aa20.56■□□□□ 0.88
SP3-204ENST00000462904 WIZO95785 1651 aa20.54■□□□□ 0.88
SP3-204ENST00000462904 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
SP3-204ENST00000462904 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
SP3-204ENST00000462904 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
SP3-204ENST00000462904 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
SP3-204ENST00000462904 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
SP3-204ENST00000462904 FBLN2P98095 1184 aa20.27■□□□□ 0.84
SP3-204ENST00000462904 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
SP3-204ENST00000462904 CHD1O14646 1710 aa20.25■□□□□ 0.83
SP3-204ENST00000462904 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SP3-204ENST00000462904 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
SP3-204ENST00000462904 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.828e-9■■■■■ 44.3
SP3-204ENST00000462904 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
SP3-204ENST00000462904 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
SP3-204ENST00000462904 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
SP3-204ENST00000462904 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
SP3-204ENST00000462904 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
SP3-204ENST00000462904 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
SP3-204ENST00000462904 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
SP3-204ENST00000462904 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
SP3-204ENST00000462904 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
SP3-204ENST00000462904 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
SP3-204ENST00000462904 RAD54L2Q9Y4B4 1467 aa19.94■□□□□ 0.78
SP3-204ENST00000462904 SOGA1O94964 1423 aa19.91■□□□□ 0.78
SP3-204ENST00000462904 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
SP3-204ENST00000462904 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
SP3-204ENST00000462904 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
SP3-204ENST00000462904 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
SP3-204ENST00000462904 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
SP3-204ENST00000462904 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
SP3-204ENST00000462904 ILDR1Q86SU0 546 aaPredicted RBP19.72■□□□□ 0.75
SP3-204ENST00000462904 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
SP3-204ENST00000462904 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
SP3-204ENST00000462904 CUX1P39880 1505 aa19.63■□□□□ 0.73
SP3-204ENST00000462904 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.73
SP3-204ENST00000462904 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
SP3-204ENST00000462904 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
SP3-204ENST00000462904 KDM4FA0A1W2PPD8 638 aa19.54■□□□□ 0.72
SP3-204ENST00000462904 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
SP3-204ENST00000462904 NUP160Q12769 1436 aa19.51■□□□□ 0.71
SP3-204ENST00000462904 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
SP3-204ENST00000462904 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
SP3-204ENST00000462904 FOXD1Q16676 465 aa19.49■□□□□ 0.71
SP3-204ENST00000462904 ABCC10Q5T3U5 1492 aa19.47■□□□□ 0.71
SP3-204ENST00000462904 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
SP3-204ENST00000462904 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms