RNA–Protein interactions for RNA: ENST00000558850.5

ZNF839-206, Transcript of zinc finger protein 839, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF839, Length 2,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF839-206ENST00000558850 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
ZNF839-206ENST00000558850 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
ZNF839-206ENST00000558850 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
ZNF839-206ENST00000558850 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
ZNF839-206ENST00000558850 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
ZNF839-206ENST00000558850 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
ZNF839-206ENST00000558850 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
ZNF839-206ENST00000558850 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
ZNF839-206ENST00000558850 HRCP23327 699 aa19.65■□□□□ 0.74
ZNF839-206ENST00000558850 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
ZNF839-206ENST00000558850 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
ZNF839-206ENST00000558850 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
ZNF839-206ENST00000558850 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
ZNF839-206ENST00000558850 ABCC9O60706 1549 aa19.08■□□□□ 0.65
ZNF839-206ENST00000558850 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
ZNF839-206ENST00000558850 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
ZNF839-206ENST00000558850 SCRIBQ14160 1630 aa19■□□□□ 0.63
ZNF839-206ENST00000558850 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
ZNF839-206ENST00000558850 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
ZNF839-206ENST00000558850 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
ZNF839-206ENST00000558850 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
ZNF839-206ENST00000558850 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
ZNF839-206ENST00000558850 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
ZNF839-206ENST00000558850 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
ZNF839-206ENST00000558850 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
ZNF839-206ENST00000558850 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
ZNF839-206ENST00000558850 WIZO95785 1651 aa18.51■□□□□ 0.55
ZNF839-206ENST00000558850 NACADO15069 1562 aa18.48■□□□□ 0.55
ZNF839-206ENST00000558850 MYT1Q01538 1121 aa18.37■□□□□ 0.53
ZNF839-206ENST00000558850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
ZNF839-206ENST00000558850 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
ZNF839-206ENST00000558850 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
ZNF839-206ENST00000558850 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
ZNF839-206ENST00000558850 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
ZNF839-206ENST00000558850 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
ZNF839-206ENST00000558850 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
ZNF839-206ENST00000558850 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
ZNF839-206ENST00000558850 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
ZNF839-206ENST00000558850 SMARCA4P51532 1647 aa18.08■□□□□ 0.49
ZNF839-206ENST00000558850 SOGA1O94964 1423 aa18.08■□□□□ 0.49
ZNF839-206ENST00000558850 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
ZNF839-206ENST00000558850 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
ZNF839-206ENST00000558850 DIEXFQ68CQ4 756 aaKnown RBP18.04■□□□□ 0.48
ZNF839-206ENST00000558850 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
ZNF839-206ENST00000558850 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
ZNF839-206ENST00000558850 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.47
ZNF839-206ENST00000558850 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
ZNF839-206ENST00000558850 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
ZNF839-206ENST00000558850 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
ZNF839-206ENST00000558850 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
ZNF839-206ENST00000558850 EEA1Q15075 1411 aa17.88■□□□□ 0.45
ZNF839-206ENST00000558850 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
ZNF839-206ENST00000558850 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
ZNF839-206ENST00000558850 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
ZNF839-206ENST00000558850 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
ZNF839-206ENST00000558850 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
ZNF839-206ENST00000558850 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
ZNF839-206ENST00000558850 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
ZNF839-206ENST00000558850 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
ZNF839-206ENST00000558850 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
ZNF839-206ENST00000558850 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
ZNF839-206ENST00000558850 CLIP1P30622 1438 aa17.7■□□□□ 0.42
ZNF839-206ENST00000558850 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
ZNF839-206ENST00000558850 KIF21BO75037 1637 aa17.67■□□□□ 0.42
ZNF839-206ENST00000558850 APLP2Q06481 763 aa17.64■□□□□ 0.41
ZNF839-206ENST00000558850 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
ZNF839-206ENST00000558850 MIER1Q8N108 512 aa17.63■□□□□ 0.41
ZNF839-206ENST00000558850 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
ZNF839-206ENST00000558850 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
ZNF839-206ENST00000558850 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
ZNF839-206ENST00000558850 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
ZNF839-206ENST00000558850 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
ZNF839-206ENST00000558850 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
ZNF839-206ENST00000558850 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
ZNF839-206ENST00000558850 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
ZNF839-206ENST00000558850 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
ZNF839-206ENST00000558850 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
ZNF839-206ENST00000558850 PRXQ9BXM0 1461 aa17.33■□□□□ 0.36
ZNF839-206ENST00000558850 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
ZNF839-206ENST00000558850 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
ZNF839-206ENST00000558850 ITGAEP38570 1179 aa17.28■□□□□ 0.36
ZNF839-206ENST00000558850 CUX1P39880 1505 aa17.26■□□□□ 0.35
ZNF839-206ENST00000558850 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
ZNF839-206ENST00000558850 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
ZNF839-206ENST00000558850 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
ZNF839-206ENST00000558850 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
ZNF839-206ENST00000558850 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
ZNF839-206ENST00000558850 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
ZNF839-206ENST00000558850 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
ZNF839-206ENST00000558850 CUX2O14529 1486 aa17.11■□□□□ 0.33
ZNF839-206ENST00000558850 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
ZNF839-206ENST00000558850 CFTRP13569 1480 aa17.09■□□□□ 0.33
ZNF839-206ENST00000558850 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
ZNF839-206ENST00000558850 KCNH8Q96L42 1107 aa17.07■□□□□ 0.32
ZNF839-206ENST00000558850 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
ZNF839-206ENST00000558850 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
ZNF839-206ENST00000558850 IGF1RP08069 1367 aa17.02■□□□□ 0.31
ZNF839-206ENST00000558850 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
ZNF839-206ENST00000558850 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
ZNF839-206ENST00000558850 P3H3Q8IVL6 736 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms