RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
MTHFD1L-211ENST00000611279 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
MTHFD1L-211ENST00000611279 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.28
MTHFD1L-211ENST00000611279 HRCP23327 699 aa29.02■■■□□ 2.24
MTHFD1L-211ENST00000611279 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
MTHFD1L-211ENST00000611279 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
MTHFD1L-211ENST00000611279 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
MTHFD1L-211ENST00000611279 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
MTHFD1L-211ENST00000611279 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
MTHFD1L-211ENST00000611279 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.07
MTHFD1L-211ENST00000611279 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
MTHFD1L-211ENST00000611279 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
MTHFD1L-211ENST00000611279 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
MTHFD1L-211ENST00000611279 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
MTHFD1L-211ENST00000611279 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
MTHFD1L-211ENST00000611279 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
MTHFD1L-211ENST00000611279 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
MTHFD1L-211ENST00000611279 GTF3C3Q9Y5Q9 886 aa26.97■■□□□ 1.91
MTHFD1L-211ENST00000611279 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
MTHFD1L-211ENST00000611279 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
MTHFD1L-211ENST00000611279 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.9
MTHFD1L-211ENST00000611279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.86■■□□□ 1.89
MTHFD1L-211ENST00000611279 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
MTHFD1L-211ENST00000611279 CENPBP07199 599 aaPredicted RBP26.81■■□□□ 1.88
MTHFD1L-211ENST00000611279 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
MTHFD1L-211ENST00000611279 YTHDC1Q96MU7 727 aaKnown RBP26.8■■□□□ 1.88
MTHFD1L-211ENST00000611279 MYT1Q01538 1121 aa26.75■■□□□ 1.87
MTHFD1L-211ENST00000611279 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
MTHFD1L-211ENST00000611279 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
MTHFD1L-211ENST00000611279 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
MTHFD1L-211ENST00000611279 ZNF316A6NFI3 1004 aaPredicted RBP25.96■■□□□ 1.75
MTHFD1L-211ENST00000611279 MIER1Q8N108 512 aa25.93■■□□□ 1.74
MTHFD1L-211ENST00000611279 HNRNPUL2Q1KMD3 747 aaKnown RBP25.83■■□□□ 1.73
MTHFD1L-211ENST00000611279 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
MTHFD1L-211ENST00000611279 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
MTHFD1L-211ENST00000611279 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
MTHFD1L-211ENST00000611279 BCANQ96GW7 911 aa25.57■■□□□ 1.68
MTHFD1L-211ENST00000611279 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.67
MTHFD1L-211ENST00000611279 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
MTHFD1L-211ENST00000611279 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
MTHFD1L-211ENST00000611279 ANP32EQ9BTT0 268 aa25.35■■□□□ 1.65
MTHFD1L-211ENST00000611279 APLP2Q06481 763 aa25.33■■□□□ 1.65
MTHFD1L-211ENST00000611279 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
MTHFD1L-211ENST00000611279 ABCC9O60706 1549 aa25.28■■□□□ 1.64
MTHFD1L-211ENST00000611279 TSHZ2Q9NRE2 1034 aa25.28■■□□□ 1.64
MTHFD1L-211ENST00000611279 CSRNP3Q8WYN3 585 aa25.24■■□□□ 1.63
MTHFD1L-211ENST00000611279 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
MTHFD1L-211ENST00000611279 FKBP8Q14318 412 aa25.09■■□□□ 1.61
MTHFD1L-211ENST00000611279 ITGAEP38570 1179 aa25.05■■□□□ 1.6
MTHFD1L-211ENST00000611279 KCNH8Q96L42 1107 aa25■■□□□ 1.59
MTHFD1L-211ENST00000611279 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
MTHFD1L-211ENST00000611279 NEFLP07196 543 aa24.99■■□□□ 1.59
MTHFD1L-211ENST00000611279 ERICH6Q7L0X2 663 aa24.95■■□□□ 1.59
MTHFD1L-211ENST00000611279 SOGA1O94964 1423 aa24.92■■□□□ 1.58
MTHFD1L-211ENST00000611279 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.57
MTHFD1L-211ENST00000611279 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
MTHFD1L-211ENST00000611279 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
MTHFD1L-211ENST00000611279 TRIM52Q96A61 297 aa24.82■■□□□ 1.56
MTHFD1L-211ENST00000611279 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
MTHFD1L-211ENST00000611279 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
MTHFD1L-211ENST00000611279 RBM19Q9Y4C8 960 aaKnown RBP24.8■■□□□ 1.56
MTHFD1L-211ENST00000611279 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
MTHFD1L-211ENST00000611279 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
MTHFD1L-211ENST00000611279 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
MTHFD1L-211ENST00000611279 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
MTHFD1L-211ENST00000611279 IRX6P78412 446 aaPredicted RBP24.67■■□□□ 1.54
MTHFD1L-211ENST00000611279 WIZO95785 1651 aa24.67■■□□□ 1.54
MTHFD1L-211ENST00000611279 CLIP1P30622 1438 aa24.58■■□□□ 1.53
MTHFD1L-211ENST00000611279 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
MTHFD1L-211ENST00000611279 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
MTHFD1L-211ENST00000611279 DHX57Q6P158 1386 aaKnown RBP24.47■■□□□ 1.51
MTHFD1L-211ENST00000611279 CDK11AQ9UQ88 783 aaPredicted RBP24.45■■□□□ 1.5
MTHFD1L-211ENST00000611279 MSH5O43196 834 aa24.43■■□□□ 1.5
MTHFD1L-211ENST00000611279 ANP32CO43423 234 aa24.41■■□□□ 1.5
MTHFD1L-211ENST00000611279 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
MTHFD1L-211ENST00000611279 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
MTHFD1L-211ENST00000611279 NBR1Q14596 966 aa24.39■■□□□ 1.5
MTHFD1L-211ENST00000611279 SIN3AQ96ST3 1273 aa24.37■■□□□ 1.49
MTHFD1L-211ENST00000611279 HNRNPUQ00839 825 aaKnown RBP eCLIP24.32■■□□□ 1.48
MTHFD1L-211ENST00000611279 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
MTHFD1L-211ENST00000611279 EEA1Q15075 1411 aa24.3■■□□□ 1.48
MTHFD1L-211ENST00000611279 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
MTHFD1L-211ENST00000611279 CNGB1Q14028 1251 aaPredicted RBP24.29■■□□□ 1.48
MTHFD1L-211ENST00000611279 DEKP35659 375 aaKnown RBP24.25■■□□□ 1.47
MTHFD1L-211ENST00000611279 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
MTHFD1L-211ENST00000611279 PRKCSHP14314 528 aaPredicted RBP24.2■■□□□ 1.46
MTHFD1L-211ENST00000611279 NACADO15069 1562 aa24.19■■□□□ 1.46
MTHFD1L-211ENST00000611279 BAZ1AQ9NRL2 1556 aaPredicted RBP24.14■■□□□ 1.45
MTHFD1L-211ENST00000611279 RAPGEF2Q9Y4G8 1499 aa24.12■■□□□ 1.45
MTHFD1L-211ENST00000611279 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
MTHFD1L-211ENST00000611279 RTN4Q9NQC3 1192 aaKnown RBP24.08■■□□□ 1.45
MTHFD1L-211ENST00000611279 SENP3-EIF4A1A0A087X0R7 540 aa24.06■■□□□ 1.44
MTHFD1L-211ENST00000611279 RAB3GAP2Q9H2M9 1393 aa24.03■■□□□ 1.44
MTHFD1L-211ENST00000611279 ANO8Q9HCE9 1232 aaPredicted RBP24.03■■□□□ 1.44
MTHFD1L-211ENST00000611279 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
MTHFD1L-211ENST00000611279 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.44
MTHFD1L-211ENST00000611279 CCNB3Q8WWL7 1395 aa24.01■■□□□ 1.43
MTHFD1L-211ENST00000611279 FANCIQ9NVI1 1328 aa23.99■■□□□ 1.43
MTHFD1L-211ENST00000611279 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
MTHFD1L-211ENST00000611279 P3H3Q8IVL6 736 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms