RNA–Protein interactions for RNA: ENST00000585838.2

POLR2E-202, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-202ENST00000585838 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
POLR2E-202ENST00000585838 CCDC180Q9P1Z9 1646 aa21.46■■□□□ 1.03
POLR2E-202ENST00000585838 ABCC9O60706 1549 aa20.98■□□□□ 0.95
POLR2E-202ENST00000585838 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
POLR2E-202ENST00000585838 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
POLR2E-202ENST00000585838 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
POLR2E-202ENST00000585838 NACADO15069 1562 aa20.18■□□□□ 0.82
POLR2E-202ENST00000585838 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
POLR2E-202ENST00000585838 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
POLR2E-202ENST00000585838 MYO15BQ96JP2 1530 aa20.08■□□□□ 0.81
POLR2E-202ENST00000585838 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
POLR2E-202ENST00000585838 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
POLR2E-202ENST00000585838 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
POLR2E-202ENST00000585838 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
POLR2E-202ENST00000585838 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
POLR2E-202ENST00000585838 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
POLR2E-202ENST00000585838 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
POLR2E-202ENST00000585838 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
POLR2E-202ENST00000585838 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
POLR2E-202ENST00000585838 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
POLR2E-202ENST00000585838 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
POLR2E-202ENST00000585838 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
POLR2E-202ENST00000585838 WIZO95785 1651 aa18.86■□□□□ 0.61
POLR2E-202ENST00000585838 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
POLR2E-202ENST00000585838 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
POLR2E-202ENST00000585838 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
POLR2E-202ENST00000585838 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
POLR2E-202ENST00000585838 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
POLR2E-202ENST00000585838 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
POLR2E-202ENST00000585838 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
POLR2E-202ENST00000585838 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
POLR2E-202ENST00000585838 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
POLR2E-202ENST00000585838 NESP48681 1621 aa18.28■□□□□ 0.52
POLR2E-202ENST00000585838 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
POLR2E-202ENST00000585838 CFTRP13569 1480 aa18.17■□□□□ 0.5
POLR2E-202ENST00000585838 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
POLR2E-202ENST00000585838 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
POLR2E-202ENST00000585838 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
POLR2E-202ENST00000585838 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
POLR2E-202ENST00000585838 ABCC8Q09428 1581 aa18■□□□□ 0.47
POLR2E-202ENST00000585838 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
POLR2E-202ENST00000585838 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
POLR2E-202ENST00000585838 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
POLR2E-202ENST00000585838 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
POLR2E-202ENST00000585838 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
POLR2E-202ENST00000585838 PRDM2Q13029 1718 aa17.84■□□□□ 0.45
POLR2E-202ENST00000585838 CUX1P39880 1505 aa17.83■□□□□ 0.45
POLR2E-202ENST00000585838 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
POLR2E-202ENST00000585838 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
POLR2E-202ENST00000585838 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
POLR2E-202ENST00000585838 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
POLR2E-202ENST00000585838 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
POLR2E-202ENST00000585838 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
POLR2E-202ENST00000585838 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
POLR2E-202ENST00000585838 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
POLR2E-202ENST00000585838 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
POLR2E-202ENST00000585838 SOGA1O94964 1423 aa17.69■□□□□ 0.42
POLR2E-202ENST00000585838 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
POLR2E-202ENST00000585838 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
POLR2E-202ENST00000585838 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
POLR2E-202ENST00000585838 WDR62O43379 1518 aa17.66■□□□□ 0.42
POLR2E-202ENST00000585838 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
POLR2E-202ENST00000585838 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
POLR2E-202ENST00000585838 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
POLR2E-202ENST00000585838 CUX2O14529 1486 aa17.61■□□□□ 0.41
POLR2E-202ENST00000585838 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.42e-7■■■■□ 26
POLR2E-202ENST00000585838 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
POLR2E-202ENST00000585838 IFT140Q96RY7 1462 aa17.53■□□□□ 0.4
POLR2E-202ENST00000585838 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
POLR2E-202ENST00000585838 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
POLR2E-202ENST00000585838 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
POLR2E-202ENST00000585838 ABCA10Q8WWZ4 1543 aa17.48■□□□□ 0.39
POLR2E-202ENST00000585838 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
POLR2E-202ENST00000585838 IGF1RP08069 1367 aa17.43■□□□□ 0.38
POLR2E-202ENST00000585838 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
POLR2E-202ENST00000585838 FBLN2P98095 1184 aa17.39■□□□□ 0.37
POLR2E-202ENST00000585838 EEA1Q15075 1411 aa17.35■□□□□ 0.37
POLR2E-202ENST00000585838 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
POLR2E-202ENST00000585838 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
POLR2E-202ENST00000585838 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
POLR2E-202ENST00000585838 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
POLR2E-202ENST00000585838 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
POLR2E-202ENST00000585838 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
POLR2E-202ENST00000585838 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
POLR2E-202ENST00000585838 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
POLR2E-202ENST00000585838 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
POLR2E-202ENST00000585838 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
POLR2E-202ENST00000585838 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
POLR2E-202ENST00000585838 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
POLR2E-202ENST00000585838 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
POLR2E-202ENST00000585838 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
POLR2E-202ENST00000585838 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
POLR2E-202ENST00000585838 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
POLR2E-202ENST00000585838 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
POLR2E-202ENST00000585838 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
POLR2E-202ENST00000585838 KIF21BO75037 1637 aa17.11■□□□□ 0.33
POLR2E-202ENST00000585838 CUL7Q14999 1698 aa17.11■□□□□ 0.33
POLR2E-202ENST00000585838 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
POLR2E-202ENST00000585838 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
POLR2E-202ENST00000585838 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms