RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
POLR2E-201ENST00000215587 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
POLR2E-201ENST00000215587 ABCC9O60706 1549 aa33.31■■■□□ 2.92
POLR2E-201ENST00000215587 ZCCHC6Q5VYS8 1495 aaKnown RBP32.31■■■□□ 2.76
POLR2E-201ENST00000215587 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
POLR2E-201ENST00000215587 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
POLR2E-201ENST00000215587 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
POLR2E-201ENST00000215587 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
POLR2E-201ENST00000215587 NACADO15069 1562 aa31.71■■■□□ 2.67
POLR2E-201ENST00000215587 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
POLR2E-201ENST00000215587 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
POLR2E-201ENST00000215587 SHROOM4Q9ULL8 1493 aa31.03■■■□□ 2.56
POLR2E-201ENST00000215587 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
POLR2E-201ENST00000215587 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
POLR2E-201ENST00000215587 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
POLR2E-201ENST00000215587 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
POLR2E-201ENST00000215587 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
POLR2E-201ENST00000215587 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
POLR2E-201ENST00000215587 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
POLR2E-201ENST00000215587 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
POLR2E-201ENST00000215587 SMARCA4P51532 1647 aa29.76■■■□□ 2.35
POLR2E-201ENST00000215587 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
POLR2E-201ENST00000215587 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
POLR2E-201ENST00000215587 SUPT5HO00267 1087 aaKnown RBP29.63■■■□□ 2.33
POLR2E-201ENST00000215587 WIZO95785 1651 aa29.46■■■□□ 2.31
POLR2E-201ENST00000215587 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
POLR2E-201ENST00000215587 SMARCA2P51531 1590 aa29.42■■■□□ 2.3
POLR2E-201ENST00000215587 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
POLR2E-201ENST00000215587 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
POLR2E-201ENST00000215587 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
POLR2E-201ENST00000215587 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
POLR2E-201ENST00000215587 HMGXB3Q12766 1538 aa29.2■■■□□ 2.26
POLR2E-201ENST00000215587 CUX2O14529 1486 aa29.1■■■□□ 2.25
POLR2E-201ENST00000215587 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
POLR2E-201ENST00000215587 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
POLR2E-201ENST00000215587 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
POLR2E-201ENST00000215587 CFTRP13569 1480 aa28.44■■■□□ 2.14
POLR2E-201ENST00000215587 NESP48681 1621 aa28.37■■■□□ 2.13
POLR2E-201ENST00000215587 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
POLR2E-201ENST00000215587 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
POLR2E-201ENST00000215587 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
POLR2E-201ENST00000215587 TRIM41Q8WV44 630 aa28.27■■■□□ 2.12
POLR2E-201ENST00000215587 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
POLR2E-201ENST00000215587 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
POLR2E-201ENST00000215587 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
POLR2E-201ENST00000215587 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
POLR2E-201ENST00000215587 CEP164Q9UPV0 1460 aa28.04■■■□□ 2.08
POLR2E-201ENST00000215587 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.08
POLR2E-201ENST00000215587 KIF21AQ7Z4S6 1674 aa27.99■■■□□ 2.07
POLR2E-201ENST00000215587 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
POLR2E-201ENST00000215587 CUX1P39880 1505 aa27.86■■■□□ 2.05
POLR2E-201ENST00000215587 TOP2BQ02880 1626 aa27.85■■■□□ 2.05
POLR2E-201ENST00000215587 BIVM-ERCC5R4GMW8 1640 aa27.83■■■□□ 2.05
POLR2E-201ENST00000215587 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
POLR2E-201ENST00000215587 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
POLR2E-201ENST00000215587 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
POLR2E-201ENST00000215587 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
POLR2E-201ENST00000215587 WDR62O43379 1518 aa27.73■■■□□ 2.03
POLR2E-201ENST00000215587 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
POLR2E-201ENST00000215587 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
POLR2E-201ENST00000215587 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
POLR2E-201ENST00000215587 SOGA1O94964 1423 aa27.5■■□□□ 1.99
POLR2E-201ENST00000215587 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.99
POLR2E-201ENST00000215587 EEA1Q15075 1411 aa27.41■■□□□ 1.98
POLR2E-201ENST00000215587 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
POLR2E-201ENST00000215587 IFT140Q96RY7 1462 aa27.4■■□□□ 1.98
POLR2E-201ENST00000215587 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
POLR2E-201ENST00000215587 KIF27Q86VH2 1401 aa27.37■■□□□ 1.97
POLR2E-201ENST00000215587 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
POLR2E-201ENST00000215587 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
POLR2E-201ENST00000215587 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
POLR2E-201ENST00000215587 RIMBP3CA6NJZ7 1639 aa27.32■■□□□ 1.96
POLR2E-201ENST00000215587 RIMBP3BA6NNM3 1639 aa27.32■■□□□ 1.96
POLR2E-201ENST00000215587 RIMBP3Q9UFD9 1639 aa27.32■■□□□ 1.96
POLR2E-201ENST00000215587 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
POLR2E-201ENST00000215587 CSRNP3Q8WYN3 585 aa27.22■■□□□ 1.95
POLR2E-201ENST00000215587 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
POLR2E-201ENST00000215587 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
POLR2E-201ENST00000215587 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
POLR2E-201ENST00000215587 ZNF608Q9ULD9 1512 aaPredicted RBP27.17■■□□□ 1.94
POLR2E-201ENST00000215587 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.932e-7■■■■□ 26
POLR2E-201ENST00000215587 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
POLR2E-201ENST00000215587 IGF1RP08069 1367 aa27.11■■□□□ 1.93
POLR2E-201ENST00000215587 ERICH3Q5RHP9 1530 aa27.11■■□□□ 1.93
POLR2E-201ENST00000215587 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
POLR2E-201ENST00000215587 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
POLR2E-201ENST00000215587 KIF21BO75037 1637 aa27.05■■□□□ 1.92
POLR2E-201ENST00000215587 CUL7Q14999 1698 aa27.04■■□□□ 1.92
POLR2E-201ENST00000215587 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
POLR2E-201ENST00000215587 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
POLR2E-201ENST00000215587 GOLGA3Q08378 1498 aa26.98■■□□□ 1.91
POLR2E-201ENST00000215587 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
POLR2E-201ENST00000215587 LOC105371045A0A1W2PR82 267 aa26.95■■□□□ 1.9
POLR2E-201ENST00000215587 EHMT2Q96KQ7 1210 aa26.95■■□□□ 1.9
POLR2E-201ENST00000215587 RAPGEF2Q9Y4G8 1499 aa26.94■■□□□ 1.9
POLR2E-201ENST00000215587 TRHP20396 242 aaPredicted RBP26.94■■□□□ 1.9
POLR2E-201ENST00000215587 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
POLR2E-201ENST00000215587 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
POLR2E-201ENST00000215587 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
POLR2E-201ENST00000215587 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms