Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TSPY23P-201ENST00000440136 739 ntBASIC21.11■□□□□ 0.97
CBX8Q9HC52 AF201337.1-201ENST00000520239 748 ntBASIC21.11■□□□□ 0.97
CBX8Q9HC52 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX8Q9HC52 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.11■□□□□ 0.97
CBX8Q9HC52 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 DUSP5P2-201ENST00000426873 1033 ntBASIC21.1■□□□□ 0.97
CBX8Q9HC52 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBX8Q9HC52 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CBX8Q9HC52 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 HEIH-201ENST00000623091 1652 ntBASIC21.09■□□□□ 0.97
CBX8Q9HC52 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CBX8Q9HC52 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CBX8Q9HC52 AC135776.1-201ENST00000319817 2481 ntBASIC21.09■□□□□ 0.97
CBX8Q9HC52 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CBX8Q9HC52 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CBX8Q9HC52 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CBX8Q9HC52 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CBX8Q9HC52 AL162430.1-201ENST00000480705 870 ntBASIC21.08■□□□□ 0.97
CBX8Q9HC52 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CBX8Q9HC52 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CBX8Q9HC52 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CBX8Q9HC52 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CBX8Q9HC52 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.08■□□□□ 0.96
CBX8Q9HC52 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CBX8Q9HC52 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CBX8Q9HC52 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.08■□□□□ 0.96
CBX8Q9HC52 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.08■□□□□ 0.96
CBX8Q9HC52 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.08■□□□□ 0.96
CBX8Q9HC52 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.07■□□□□ 0.96
CBX8Q9HC52 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms