RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
PCDHA8-201ENST00000378123 SHROOM4Q9ULL8 1493 aa31.98■■■□□ 2.71
PCDHA8-201ENST00000378123 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
PCDHA8-201ENST00000378123 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
PCDHA8-201ENST00000378123 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
PCDHA8-201ENST00000378123 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
PCDHA8-201ENST00000378123 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
PCDHA8-201ENST00000378123 DCAF1Q9Y4B6 1507 aa30.26■■■□□ 2.43
PCDHA8-201ENST00000378123 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.43
PCDHA8-201ENST00000378123 SCRIBQ14160 1630 aa29.7■■■□□ 2.35
PCDHA8-201ENST00000378123 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
PCDHA8-201ENST00000378123 ABCC9O60706 1549 aa29.55■■■□□ 2.32
PCDHA8-201ENST00000378123 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
PCDHA8-201ENST00000378123 PCGF6Q9BYE7 350 aa29.43■■■□□ 2.3
PCDHA8-201ENST00000378123 HRCP23327 699 aa29.25■■■□□ 2.27
PCDHA8-201ENST00000378123 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.25
PCDHA8-201ENST00000378123 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
PCDHA8-201ENST00000378123 NACADO15069 1562 aa29.1■■■□□ 2.25
PCDHA8-201ENST00000378123 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
PCDHA8-201ENST00000378123 FAM9AQ8IZU1 332 aaPredicted RBP29.02■■■□□ 2.24
PCDHA8-201ENST00000378123 MROH2BQ7Z745 1585 aa28.95■■■□□ 2.23
PCDHA8-201ENST00000378123 EHMT2Q96KQ7 1210 aa28.92■■■□□ 2.22
PCDHA8-201ENST00000378123 PPARGC1BQ86YN6 1023 aaKnown RBP28.9■■■□□ 2.22
PCDHA8-201ENST00000378123 WIZO95785 1651 aa28.79■■■□□ 2.2
PCDHA8-201ENST00000378123 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
PCDHA8-201ENST00000378123 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
PCDHA8-201ENST00000378123 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
PCDHA8-201ENST00000378123 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
PCDHA8-201ENST00000378123 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
PCDHA8-201ENST00000378123 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
PCDHA8-201ENST00000378123 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
PCDHA8-201ENST00000378123 TOP2AP11388 1531 aaKnown RBP28.21■■■□□ 2.11
PCDHA8-201ENST00000378123 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
PCDHA8-201ENST00000378123 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
PCDHA8-201ENST00000378123 BICRAQ9NZM4 1560 aa27.98■■■□□ 2.07
PCDHA8-201ENST00000378123 SOGA1O94964 1423 aa27.95■■■□□ 2.07
PCDHA8-201ENST00000378123 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
PCDHA8-201ENST00000378123 ZEB1P37275 1124 aaPredicted RBP27.92■■■□□ 2.06
PCDHA8-201ENST00000378123 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
PCDHA8-201ENST00000378123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
PCDHA8-201ENST00000378123 CSRNP3Q8WYN3 585 aa27.74■■■□□ 2.03
PCDHA8-201ENST00000378123 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
PCDHA8-201ENST00000378123 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
PCDHA8-201ENST00000378123 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
PCDHA8-201ENST00000378123 TNIKQ9UKE5 1360 aa27.61■■■□□ 2.01
PCDHA8-201ENST00000378123 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
PCDHA8-201ENST00000378123 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
PCDHA8-201ENST00000378123 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
PCDHA8-201ENST00000378123 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
PCDHA8-201ENST00000378123 EEA1Q15075 1411 aa27.52■■■□□ 2
PCDHA8-201ENST00000378123 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
PCDHA8-201ENST00000378123 GOLGA3Q08378 1498 aa27.45■■□□□ 1.98
PCDHA8-201ENST00000378123 RANGAP1P46060 587 aaPredicted RBP27.4■■□□□ 1.98
PCDHA8-201ENST00000378123 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
PCDHA8-201ENST00000378123 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
PCDHA8-201ENST00000378123 CLIP1P30622 1438 aa27.22■■□□□ 1.95
PCDHA8-201ENST00000378123 KIF21BO75037 1637 aa27.18■■□□□ 1.94
PCDHA8-201ENST00000378123 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
PCDHA8-201ENST00000378123 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
PCDHA8-201ENST00000378123 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
PCDHA8-201ENST00000378123 APLP2Q06481 763 aa27.02■■□□□ 1.92
PCDHA8-201ENST00000378123 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
PCDHA8-201ENST00000378123 NCAPD3P42695 1498 aa27■■□□□ 1.91
PCDHA8-201ENST00000378123 DIEXFQ68CQ4 756 aaKnown RBP27■■□□□ 1.91
PCDHA8-201ENST00000378123 BIVM-ERCC5R4GMW8 1640 aa26.93■■□□□ 1.9
PCDHA8-201ENST00000378123 CUX1P39880 1505 aa26.92■■□□□ 1.9
PCDHA8-201ENST00000378123 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
PCDHA8-201ENST00000378123 PRXQ9BXM0 1461 aa26.85■■□□□ 1.89
PCDHA8-201ENST00000378123 CFTRP13569 1480 aa26.8■■□□□ 1.88
PCDHA8-201ENST00000378123 KANK4Q5T7N3 995 aaPredicted RBP26.78■■□□□ 1.88
PCDHA8-201ENST00000378123 NEUROD1Q13562 356 aa26.77■■□□□ 1.88
PCDHA8-201ENST00000378123 ZNF316A6NFI3 1004 aaPredicted RBP26.76■■□□□ 1.87
PCDHA8-201ENST00000378123 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
PCDHA8-201ENST00000378123 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
PCDHA8-201ENST00000378123 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
PCDHA8-201ENST00000378123 ACIN1Q9UKV3 1341 aaKnown RBP26.69■■□□□ 1.86
PCDHA8-201ENST00000378123 CUX2O14529 1486 aa26.59■■□□□ 1.85
PCDHA8-201ENST00000378123 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
PCDHA8-201ENST00000378123 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
PCDHA8-201ENST00000378123 IGF1RP08069 1367 aa26.54■■□□□ 1.84
PCDHA8-201ENST00000378123 YTHDC1Q96MU7 727 aaKnown RBP26.52■■□□□ 1.84
PCDHA8-201ENST00000378123 ITGAEP38570 1179 aa26.52■■□□□ 1.84
PCDHA8-201ENST00000378123 CENPBP07199 599 aaPredicted RBP26.49■■□□□ 1.83
PCDHA8-201ENST00000378123 MIER1Q8N108 512 aa26.49■■□□□ 1.83
PCDHA8-201ENST00000378123 GTF3C3Q9Y5Q9 886 aa26.48■■□□□ 1.83
PCDHA8-201ENST00000378123 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
PCDHA8-201ENST00000378123 DHX57Q6P158 1386 aaKnown RBP26.44■■□□□ 1.82
PCDHA8-201ENST00000378123 CARMIL1Q5VZK9 1371 aa26.42■■□□□ 1.82
PCDHA8-201ENST00000378123 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
PCDHA8-201ENST00000378123 P3H3Q8IVL6 736 aa26.41■■□□□ 1.82
PCDHA8-201ENST00000378123 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
PCDHA8-201ENST00000378123 RRBP1Q9P2E9 1410 aaKnown RBP26.37■■□□□ 1.81
PCDHA8-201ENST00000378123 CCNB3Q8WWL7 1395 aa26.34■■□□□ 1.81
PCDHA8-201ENST00000378123 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
PCDHA8-201ENST00000378123 FANCD2Q9BXW9 1451 aa26.32■■□□□ 1.8
PCDHA8-201ENST00000378123 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
PCDHA8-201ENST00000378123 NESP48681 1621 aa26.28■■□□□ 1.8
PCDHA8-201ENST00000378123 CLSPNQ9HAW4 1339 aa26.22■■□□□ 1.79
PCDHA8-201ENST00000378123 TIAM1Q13009 1591 aa26.18■■□□□ 1.78
PCDHA8-201ENST00000378123 FAM50AQ14320 339 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms