RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 NISCHQ9Y2I1 1504 aa46.36■■■■■ 5.01
SNAPC2-201ENST00000221573 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
SNAPC2-201ENST00000221573 ABCC9O60706 1549 aa39.58■■■■□ 3.93
SNAPC2-201ENST00000221573 ZCCHC6Q5VYS8 1495 aaKnown RBP38.76■■■■□ 3.8
SNAPC2-201ENST00000221573 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
SNAPC2-201ENST00000221573 NACADO15069 1562 aa38.36■■■■□ 3.73
SNAPC2-201ENST00000221573 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
SNAPC2-201ENST00000221573 RB1CC1Q8TDY2 1594 aa38.28■■■■□ 3.72
SNAPC2-201ENST00000221573 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
SNAPC2-201ENST00000221573 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
SNAPC2-201ENST00000221573 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
SNAPC2-201ENST00000221573 BICRAQ9NZM4 1560 aa37.16■■■■□ 3.54
SNAPC2-201ENST00000221573 PABPN1Q86U42 306 aaKnown RBP eCLIP37.05■■■■□ 3.52
SNAPC2-201ENST00000221573 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
SNAPC2-201ENST00000221573 EIF4G1Q04637 1599 aaKnown RBP36.11■■■■□ 3.37
SNAPC2-201ENST00000221573 CECR2Q9BXF3 1484 aa36.08■■■■□ 3.37
SNAPC2-201ENST00000221573 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
SNAPC2-201ENST00000221573 BAZ1AQ9NRL2 1556 aaPredicted RBP35.89■■■■□ 3.34
SNAPC2-201ENST00000221573 CC2D2AQ9P2K1 1620 aa35.84■■■■□ 3.33
SNAPC2-201ENST00000221573 MROH2BQ7Z745 1585 aa35.78■■■■□ 3.32
SNAPC2-201ENST00000221573 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
SNAPC2-201ENST00000221573 RSF1Q96T23 1441 aaPredicted RBP35.53■■■■□ 3.28
SNAPC2-201ENST00000221573 ATAD2BQ9ULI0 1458 aa35.51■■■■□ 3.27
SNAPC2-201ENST00000221573 PEG3Q9GZU2 1588 aa35.5■■■■□ 3.27
SNAPC2-201ENST00000221573 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
SNAPC2-201ENST00000221573 WIZO95785 1651 aa35.47■■■■□ 3.27
SNAPC2-201ENST00000221573 NCAPD3P42695 1498 aa35.36■■■■□ 3.25
SNAPC2-201ENST00000221573 HMGXB3Q12766 1538 aa35.29■■■■□ 3.24
SNAPC2-201ENST00000221573 BAZ1BQ9UIG0 1483 aaKnown RBP35.25■■■■□ 3.23
SNAPC2-201ENST00000221573 SUPT5HO00267 1087 aaKnown RBP35.06■■■■□ 3.2
SNAPC2-201ENST00000221573 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
SNAPC2-201ENST00000221573 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
SNAPC2-201ENST00000221573 NESP48681 1621 aa34.44■■■■□ 3.1
SNAPC2-201ENST00000221573 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
SNAPC2-201ENST00000221573 CADPSQ9ULU8 1353 aa34.36■■■■□ 3.09
SNAPC2-201ENST00000221573 CFTRP13569 1480 aa34.3■■■■□ 3.08
SNAPC2-201ENST00000221573 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
SNAPC2-201ENST00000221573 KIF21AQ7Z4S6 1674 aa34.11■■■■□ 3.05
SNAPC2-201ENST00000221573 PDS5BQ9NTI5 1447 aa34.07■■■■□ 3.05
SNAPC2-201ENST00000221573 ERCC6Q03468 1493 aa34.03■■■■□ 3.04
SNAPC2-201ENST00000221573 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.04
SNAPC2-201ENST00000221573 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
SNAPC2-201ENST00000221573 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
SNAPC2-201ENST00000221573 MRC2Q9UBG0 1479 aa33.74■■■□□ 2.99
SNAPC2-201ENST00000221573 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
SNAPC2-201ENST00000221573 WDR62O43379 1518 aa33.64■■■□□ 2.98
SNAPC2-201ENST00000221573 ABCC8Q09428 1581 aa33.62■■■□□ 2.97
SNAPC2-201ENST00000221573 DNMBPQ6XZF7 1577 aa33.56■■■□□ 2.96
SNAPC2-201ENST00000221573 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
SNAPC2-201ENST00000221573 CUX1P39880 1505 aa33.53■■■□□ 2.96
SNAPC2-201ENST00000221573 WRNQ14191 1432 aaPredicted RBP eCLIP33.48■■■□□ 2.95
SNAPC2-201ENST00000221573 SYNJ1O43426 1573 aa33.45■■■□□ 2.95
SNAPC2-201ENST00000221573 CUX2O14529 1486 aa33.43■■■□□ 2.94
SNAPC2-201ENST00000221573 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
SNAPC2-201ENST00000221573 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
SNAPC2-201ENST00000221573 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
SNAPC2-201ENST00000221573 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
SNAPC2-201ENST00000221573 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
SNAPC2-201ENST00000221573 RAD54L2Q9Y4B4 1467 aa33.16■■■□□ 2.9
SNAPC2-201ENST00000221573 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
SNAPC2-201ENST00000221573 SOGA1O94964 1423 aa33.13■■■□□ 2.89
SNAPC2-201ENST00000221573 WDR97A6NE52 1622 aa33.08■■■□□ 2.89
SNAPC2-201ENST00000221573 CHIC1Q5VXU3 224 aa33.04■■■□□ 2.88
SNAPC2-201ENST00000221573 TRIM41Q8WV44 630 aa33.04■■■□□ 2.88
SNAPC2-201ENST00000221573 ZNF608Q9ULD9 1512 aaPredicted RBP33.02■■■□□ 2.88
SNAPC2-201ENST00000221573 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
SNAPC2-201ENST00000221573 EIF4G3O43432 1585 aaKnown RBP32.95■■■□□ 2.86
SNAPC2-201ENST00000221573 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
SNAPC2-201ENST00000221573 AQRO60306 1485 aaKnown RBP eCLIP32.88■■■□□ 2.851e-8■■■■□ 21.1
SNAPC2-201ENST00000221573 ABCA5Q8WWZ7 1642 aa32.87■■■□□ 2.85
SNAPC2-201ENST00000221573 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
SNAPC2-201ENST00000221573 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
SNAPC2-201ENST00000221573 KIF27Q86VH2 1401 aa32.71■■■□□ 2.83
SNAPC2-201ENST00000221573 GRIN2BQ13224 1484 aa32.68■■■□□ 2.82
SNAPC2-201ENST00000221573 RUSC2Q8N2Y8 1516 aa32.68■■■□□ 2.82
SNAPC2-201ENST00000221573 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
SNAPC2-201ENST00000221573 ERICH3Q5RHP9 1530 aa32.6■■■□□ 2.81
SNAPC2-201ENST00000221573 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
SNAPC2-201ENST00000221573 ADAMTS12P58397 1594 aa32.51■■■□□ 2.79
SNAPC2-201ENST00000221573 IGF1RP08069 1367 aa32.51■■■□□ 2.79
SNAPC2-201ENST00000221573 CHD1O14646 1710 aa32.46■■■□□ 2.79
SNAPC2-201ENST00000221573 CUL7Q14999 1698 aa32.46■■■□□ 2.79
SNAPC2-201ENST00000221573 EEA1Q15075 1411 aa32.44■■■□□ 2.78
SNAPC2-201ENST00000221573 SYNJ2O15056 1496 aa32.41■■■□□ 2.78
SNAPC2-201ENST00000221573 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
SNAPC2-201ENST00000221573 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
SNAPC2-201ENST00000221573 FBLN2P98095 1184 aa32.34■■■□□ 2.77
SNAPC2-201ENST00000221573 CARMIL1Q5VZK9 1371 aa32.33■■■□□ 2.77
SNAPC2-201ENST00000221573 CSRNP3Q8WYN3 585 aa32.31■■■□□ 2.76
SNAPC2-201ENST00000221573 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
SNAPC2-201ENST00000221573 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
SNAPC2-201ENST00000221573 PRXQ9BXM0 1461 aa32.25■■■□□ 2.75
SNAPC2-201ENST00000221573 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
SNAPC2-201ENST00000221573 CEP170Q5SW79 1584 aa32.16■■■□□ 2.74
SNAPC2-201ENST00000221573 KIF21BO75037 1637 aa32.15■■■□□ 2.74
SNAPC2-201ENST00000221573 NUP160Q12769 1436 aa32.11■■■□□ 2.73
SNAPC2-201ENST00000221573 OSCARQ8IYS5 282 aa32.1■■■□□ 2.73
SNAPC2-201ENST00000221573 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
SNAPC2-201ENST00000221573 CTTNBP2Q8WZ74 1663 aa32■■■□□ 2.71
SNAPC2-201ENST00000221573 EHMT2Q96KQ7 1210 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms