RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.23
TCEA1-201ENST00000396401 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
TCEA1-201ENST00000396401 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
TCEA1-201ENST00000396401 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
TCEA1-201ENST00000396401 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
TCEA1-201ENST00000396401 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
TCEA1-201ENST00000396401 CHIC1Q5VXU3 224 aa29.8■■■□□ 2.36
TCEA1-201ENST00000396401 PCGF6Q9BYE7 350 aa29.63■■■□□ 2.33
TCEA1-201ENST00000396401 HRCP23327 699 aa29.58■■■□□ 2.33
TCEA1-201ENST00000396401 PPARGC1BQ86YN6 1023 aaKnown RBP29.44■■■□□ 2.3
TCEA1-201ENST00000396401 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
TCEA1-201ENST00000396401 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
TCEA1-201ENST00000396401 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
TCEA1-201ENST00000396401 DCAF1Q9Y4B6 1507 aa28.68■■■□□ 2.18
TCEA1-201ENST00000396401 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
TCEA1-201ENST00000396401 TRIM26Q12899 539 aaPredicted RBP28.54■■■□□ 2.16
TCEA1-201ENST00000396401 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
TCEA1-201ENST00000396401 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
TCEA1-201ENST00000396401 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
TCEA1-201ENST00000396401 ABCC9O60706 1549 aa28.24■■■□□ 2.11
TCEA1-201ENST00000396401 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
TCEA1-201ENST00000396401 ZEB1P37275 1124 aaPredicted RBP27.83■■■□□ 2.05
TCEA1-201ENST00000396401 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
TCEA1-201ENST00000396401 TTBK1Q5TCY1 1321 aaPredicted RBP27.82■■■□□ 2.04
TCEA1-201ENST00000396401 SCAF1Q9H7N4 1312 aaKnown RBP27.77■■■□□ 2.04
TCEA1-201ENST00000396401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.75■■■□□ 2.03
TCEA1-201ENST00000396401 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
TCEA1-201ENST00000396401 WIZO95785 1651 aa27.56■■■□□ 2
TCEA1-201ENST00000396401 CCER1Q8TC90 406 aaPredicted RBP27.53■■■□□ 2
TCEA1-201ENST00000396401 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
TCEA1-201ENST00000396401 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
TCEA1-201ENST00000396401 NACADO15069 1562 aa27.19■■□□□ 1.94
TCEA1-201ENST00000396401 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
TCEA1-201ENST00000396401 DIEXFQ68CQ4 756 aaKnown RBP27.16■■□□□ 1.94
TCEA1-201ENST00000396401 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
TCEA1-201ENST00000396401 SOGA1O94964 1423 aa27.1■■□□□ 1.93
TCEA1-201ENST00000396401 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
TCEA1-201ENST00000396401 UBTFP17480 764 aaKnown RBP27.05■■□□□ 1.92
TCEA1-201ENST00000396401 GTF3C3Q9Y5Q9 886 aa27.05■■□□□ 1.92
TCEA1-201ENST00000396401 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
TCEA1-201ENST00000396401 PELP1Q8IZL8 1130 aaKnown RBP27.05■■□□□ 1.92
TCEA1-201ENST00000396401 CEP162Q5TB80 1403 aa27.03■■□□□ 1.92
TCEA1-201ENST00000396401 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
TCEA1-201ENST00000396401 YTHDC1Q96MU7 727 aaKnown RBP26.95■■□□□ 1.9
TCEA1-201ENST00000396401 RANGAP1P46060 587 aaPredicted RBP26.89■■□□□ 1.9
TCEA1-201ENST00000396401 HNRNPUL2Q1KMD3 747 aaKnown RBP26.87■■□□□ 1.89
TCEA1-201ENST00000396401 CSRNP3Q8WYN3 585 aa26.85■■□□□ 1.89
TCEA1-201ENST00000396401 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
TCEA1-201ENST00000396401 TOP2AP11388 1531 aaKnown RBP26.82■■□□□ 1.88
TCEA1-201ENST00000396401 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
TCEA1-201ENST00000396401 CENPBP07199 599 aaPredicted RBP26.8■■□□□ 1.88
TCEA1-201ENST00000396401 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
TCEA1-201ENST00000396401 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
TCEA1-201ENST00000396401 TNIKQ9UKE5 1360 aa26.75■■□□□ 1.87
TCEA1-201ENST00000396401 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
TCEA1-201ENST00000396401 MIER1Q8N108 512 aa26.63■■□□□ 1.85
TCEA1-201ENST00000396401 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
TCEA1-201ENST00000396401 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
TCEA1-201ENST00000396401 EEA1Q15075 1411 aa26.42■■□□□ 1.82
TCEA1-201ENST00000396401 CLIP1P30622 1438 aa26.42■■□□□ 1.82
TCEA1-201ENST00000396401 SYNJ1O43426 1573 aa26.4■■□□□ 1.82
TCEA1-201ENST00000396401 APLP2Q06481 763 aa26.37■■□□□ 1.81
TCEA1-201ENST00000396401 RAPGEF2Q9Y4G8 1499 aa26.33■■□□□ 1.8
TCEA1-201ENST00000396401 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
TCEA1-201ENST00000396401 VPS8Q8N3P4 1428 aa26.23■■□□□ 1.79
TCEA1-201ENST00000396401 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
TCEA1-201ENST00000396401 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
TCEA1-201ENST00000396401 KIF21BO75037 1637 aa26.13■■□□□ 1.77
TCEA1-201ENST00000396401 ITGAEP38570 1179 aa26.13■■□□□ 1.77
TCEA1-201ENST00000396401 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
TCEA1-201ENST00000396401 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
TCEA1-201ENST00000396401 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
TCEA1-201ENST00000396401 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
TCEA1-201ENST00000396401 KCNH8Q96L42 1107 aa25.91■■□□□ 1.74
TCEA1-201ENST00000396401 ARAP1Q96P48 1450 aa25.89■■□□□ 1.73
TCEA1-201ENST00000396401 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
TCEA1-201ENST00000396401 TOP2BQ02880 1626 aa25.8■■□□□ 1.72
TCEA1-201ENST00000396401 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
TCEA1-201ENST00000396401 BCANQ96GW7 911 aa25.7■■□□□ 1.7
TCEA1-201ENST00000396401 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
TCEA1-201ENST00000396401 CUX1P39880 1505 aa25.66■■□□□ 1.7
TCEA1-201ENST00000396401 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
TCEA1-201ENST00000396401 CLSPNQ9HAW4 1339 aa25.65■■□□□ 1.7
TCEA1-201ENST00000396401 ATP1B4Q9UN42 357 aaPredicted RBP25.64■■□□□ 1.69
TCEA1-201ENST00000396401 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
TCEA1-201ENST00000396401 SIN3AQ96ST3 1273 aa25.63■■□□□ 1.69
TCEA1-201ENST00000396401 RRBP1Q9P2E9 1410 aaKnown RBP25.61■■□□□ 1.69
TCEA1-201ENST00000396401 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
TCEA1-201ENST00000396401 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
TCEA1-201ENST00000396401 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
TCEA1-201ENST00000396401 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
TCEA1-201ENST00000396401 MYT1Q01538 1121 aa25.59■■□□□ 1.69
TCEA1-201ENST00000396401 DDX10Q13206 875 aaKnown RBP25.58■■□□□ 1.69
TCEA1-201ENST00000396401 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
TCEA1-201ENST00000396401 FAM50AQ14320 339 aaKnown RBP25.57■■□□□ 1.68
TCEA1-201ENST00000396401 TSHZ2Q9NRE2 1034 aa25.53■■□□□ 1.68
TCEA1-201ENST00000396401 MAPKBP1O60336 1514 aa25.46■■□□□ 1.67
TCEA1-201ENST00000396401 CUX2O14529 1486 aa25.42■■□□□ 1.66
TCEA1-201ENST00000396401 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
TCEA1-201ENST00000396401 FKBP8Q14318 412 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms