RNA–Protein interactions for RNA: ENST00000378731.5

CCNI2-201, Transcript of cyclin I family member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCNI2, Length 2,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2-201ENST00000378731 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
CCNI2-201ENST00000378731 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
CCNI2-201ENST00000378731 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
CCNI2-201ENST00000378731 HRCP23327 699 aa29.86■■■□□ 2.37
CCNI2-201ENST00000378731 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
CCNI2-201ENST00000378731 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
CCNI2-201ENST00000378731 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
CCNI2-201ENST00000378731 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
CCNI2-201ENST00000378731 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
CCNI2-201ENST00000378731 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
CCNI2-201ENST00000378731 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
CCNI2-201ENST00000378731 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
CCNI2-201ENST00000378731 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
CCNI2-201ENST00000378731 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
CCNI2-201ENST00000378731 PELP1Q8IZL8 1130 aaKnown RBP28.29■■■□□ 2.12
CCNI2-201ENST00000378731 ZEB1P37275 1124 aaPredicted RBP28.22■■■□□ 2.11
CCNI2-201ENST00000378731 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
CCNI2-201ENST00000378731 ABCC9O60706 1549 aa27.82■■■□□ 2.04
CCNI2-201ENST00000378731 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
CCNI2-201ENST00000378731 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
CCNI2-201ENST00000378731 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
CCNI2-201ENST00000378731 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
CCNI2-201ENST00000378731 EHMT2Q96KQ7 1210 aa27.49■■□□□ 1.99
CCNI2-201ENST00000378731 ACIN1Q9UKV3 1341 aaKnown RBP27.48■■□□□ 1.99
CCNI2-201ENST00000378731 NEUROD1Q13562 356 aa27.41■■□□□ 1.98
CCNI2-201ENST00000378731 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
CCNI2-201ENST00000378731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.34■■□□□ 1.97
CCNI2-201ENST00000378731 CCER1Q8TC90 406 aaPredicted RBP27.27■■□□□ 1.96
CCNI2-201ENST00000378731 GTF3C3Q9Y5Q9 886 aa27.21■■□□□ 1.95
CCNI2-201ENST00000378731 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
CCNI2-201ENST00000378731 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.94
CCNI2-201ENST00000378731 MYT1Q01538 1121 aa27.07■■□□□ 1.92
CCNI2-201ENST00000378731 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
CCNI2-201ENST00000378731 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
CCNI2-201ENST00000378731 WIZO95785 1651 aa26.84■■□□□ 1.89
CCNI2-201ENST00000378731 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
CCNI2-201ENST00000378731 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
CCNI2-201ENST00000378731 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
CCNI2-201ENST00000378731 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
CCNI2-201ENST00000378731 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
CCNI2-201ENST00000378731 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
CCNI2-201ENST00000378731 YTHDC1Q96MU7 727 aaKnown RBP26.63■■□□□ 1.85
CCNI2-201ENST00000378731 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.84
CCNI2-201ENST00000378731 NACADO15069 1562 aa26.55■■□□□ 1.84
CCNI2-201ENST00000378731 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
CCNI2-201ENST00000378731 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
CCNI2-201ENST00000378731 MIER1Q8N108 512 aa26.52■■□□□ 1.84
CCNI2-201ENST00000378731 SOGA1O94964 1423 aa26.47■■□□□ 1.83
CCNI2-201ENST00000378731 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
CCNI2-201ENST00000378731 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
CCNI2-201ENST00000378731 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
CCNI2-201ENST00000378731 RUSC2Q8N2Y8 1516 aa26.32■■□□□ 1.8
CCNI2-201ENST00000378731 EEA1Q15075 1411 aa26.31■■□□□ 1.8
CCNI2-201ENST00000378731 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
CCNI2-201ENST00000378731 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
CCNI2-201ENST00000378731 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
CCNI2-201ENST00000378731 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
CCNI2-201ENST00000378731 SUPT16HQ9Y5B9 1047 aaKnown RBP26■■□□□ 1.75
CCNI2-201ENST00000378731 CLIP1P30622 1438 aa26■■□□□ 1.75
CCNI2-201ENST00000378731 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
CCNI2-201ENST00000378731 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
CCNI2-201ENST00000378731 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
CCNI2-201ENST00000378731 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
CCNI2-201ENST00000378731 KIF21BO75037 1637 aa25.95■■□□□ 1.74
CCNI2-201ENST00000378731 APLP2Q06481 763 aa25.9■■□□□ 1.74
CCNI2-201ENST00000378731 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
CCNI2-201ENST00000378731 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
CCNI2-201ENST00000378731 TSHZ2Q9NRE2 1034 aa25.81■■□□□ 1.72
CCNI2-201ENST00000378731 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
CCNI2-201ENST00000378731 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
CCNI2-201ENST00000378731 RANGAP1P46060 587 aaPredicted RBP25.73■■□□□ 1.71
CCNI2-201ENST00000378731 ANP32EQ9BTT0 268 aa25.69■■□□□ 1.7
CCNI2-201ENST00000378731 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
CCNI2-201ENST00000378731 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
CCNI2-201ENST00000378731 KANK4Q5T7N3 995 aaPredicted RBP25.55■■□□□ 1.68
CCNI2-201ENST00000378731 KCNH8Q96L42 1107 aa25.54■■□□□ 1.68
CCNI2-201ENST00000378731 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
CCNI2-201ENST00000378731 ARAP1Q96P48 1450 aa25.49■■□□□ 1.67
CCNI2-201ENST00000378731 RRBP1Q9P2E9 1410 aaKnown RBP25.48■■□□□ 1.67
CCNI2-201ENST00000378731 CUX2O14529 1486 aa25.45■■□□□ 1.66
CCNI2-201ENST00000378731 BCANQ96GW7 911 aa25.43■■□□□ 1.66
CCNI2-201ENST00000378731 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
CCNI2-201ENST00000378731 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
CCNI2-201ENST00000378731 BCL11AQ9H165 835 aa25.38■■□□□ 1.65
CCNI2-201ENST00000378731 FKBP8Q14318 412 aa25.37■■□□□ 1.65
CCNI2-201ENST00000378731 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
CCNI2-201ENST00000378731 CCNB3Q8WWL7 1395 aa25.34■■□□□ 1.65
CCNI2-201ENST00000378731 ITGAEP38570 1179 aa25.3■■□□□ 1.64
CCNI2-201ENST00000378731 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
CCNI2-201ENST00000378731 MAPKBP1O60336 1514 aa25.28■■□□□ 1.64
CCNI2-201ENST00000378731 RAB3GAP2Q9H2M9 1393 aa25.25■■□□□ 1.63
CCNI2-201ENST00000378731 DDX10Q13206 875 aaKnown RBP25.25■■□□□ 1.63
CCNI2-201ENST00000378731 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
CCNI2-201ENST00000378731 RBM19Q9Y4C8 960 aaKnown RBP25.23■■□□□ 1.63
CCNI2-201ENST00000378731 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
CCNI2-201ENST00000378731 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
CCNI2-201ENST00000378731 PPP1R15AO75807 674 aaPredicted RBP25.15■■□□□ 1.62
CCNI2-201ENST00000378731 NEFLP07196 543 aa25.15■■□□□ 1.62
CCNI2-201ENST00000378731 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
CCNI2-201ENST00000378731 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms