RNA–Protein interactions for RNA: ENST00000373538.7

RABEPK-202, Transcript of Rab9 effector protein with kelch motifs, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABEPK, Length 1,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-202ENST00000373538 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
RABEPK-202ENST00000373538 CCDC180Q9P1Z9 1646 aa39.4■■■■□ 3.9
RABEPK-202ENST00000373538 ABCC9O60706 1549 aa37.73■■■■□ 3.63
RABEPK-202ENST00000373538 ZCCHC6Q5VYS8 1495 aaKnown RBP37.53■■■■□ 3.6
RABEPK-202ENST00000373538 DCAF1Q9Y4B6 1507 aa37.08■■■■□ 3.53
RABEPK-202ENST00000373538 DCAF8L2P0C7V8 631 aa37.04■■■■□ 3.52
RABEPK-202ENST00000373538 MYO15BQ96JP2 1530 aa36.88■■■■□ 3.49
RABEPK-202ENST00000373538 NACADO15069 1562 aa36.81■■■■□ 3.48
RABEPK-202ENST00000373538 RB1CC1Q8TDY2 1594 aa36.63■■■■□ 3.45
RABEPK-202ENST00000373538 SCRIBQ14160 1630 aa36.09■■■■□ 3.37
RABEPK-202ENST00000373538 SHROOM4Q9ULL8 1493 aa36■■■■□ 3.35
RABEPK-202ENST00000373538 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
RABEPK-202ENST00000373538 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
RABEPK-202ENST00000373538 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
RABEPK-202ENST00000373538 CECR2Q9BXF3 1484 aa34.86■■■■□ 3.17
RABEPK-202ENST00000373538 BAZ1AQ9NRL2 1556 aaPredicted RBP34.63■■■■□ 3.13
RABEPK-202ENST00000373538 MROH2BQ7Z745 1585 aa34.59■■■■□ 3.13
RABEPK-202ENST00000373538 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
RABEPK-202ENST00000373538 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
RABEPK-202ENST00000373538 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.11
RABEPK-202ENST00000373538 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
RABEPK-202ENST00000373538 WIZO95785 1651 aa34.27■■■■□ 3.08
RABEPK-202ENST00000373538 PEG3Q9GZU2 1588 aa34.22■■■■□ 3.07
RABEPK-202ENST00000373538 CC2D2AQ9P2K1 1620 aa34.17■■■■□ 3.06
RABEPK-202ENST00000373538 ATAD2BQ9ULI0 1458 aa34.16■■■■□ 3.06
RABEPK-202ENST00000373538 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
RABEPK-202ENST00000373538 NCAPD3P42695 1498 aa33.98■■■■□ 3.03
RABEPK-202ENST00000373538 TOP2AP11388 1531 aaKnown RBP33.92■■■■□ 3.02
RABEPK-202ENST00000373538 BAZ1BQ9UIG0 1483 aaKnown RBP33.9■■■■□ 3.02
RABEPK-202ENST00000373538 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
RABEPK-202ENST00000373538 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
RABEPK-202ENST00000373538 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
RABEPK-202ENST00000373538 CFTRP13569 1480 aa33.04■■■□□ 2.88
RABEPK-202ENST00000373538 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
RABEPK-202ENST00000373538 NESP48681 1621 aa32.95■■■□□ 2.87
RABEPK-202ENST00000373538 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
RABEPK-202ENST00000373538 PRDM2Q13029 1718 aa32.88■■■□□ 2.85
RABEPK-202ENST00000373538 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
RABEPK-202ENST00000373538 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
RABEPK-202ENST00000373538 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
RABEPK-202ENST00000373538 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
RABEPK-202ENST00000373538 CHIC1Q5VXU3 224 aa32.56■■■□□ 2.8
RABEPK-202ENST00000373538 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
RABEPK-202ENST00000373538 WRNQ14191 1432 aaPredicted RBP eCLIP32.47■■■□□ 2.79
RABEPK-202ENST00000373538 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
RABEPK-202ENST00000373538 CUX1P39880 1505 aa32.38■■■□□ 2.77
RABEPK-202ENST00000373538 ERCC6Q03468 1493 aa32.38■■■□□ 2.77
RABEPK-202ENST00000373538 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
RABEPK-202ENST00000373538 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
RABEPK-202ENST00000373538 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
RABEPK-202ENST00000373538 TRIM41Q8WV44 630 aa32.31■■■□□ 2.76
RABEPK-202ENST00000373538 DNMBPQ6XZF7 1577 aa32.29■■■□□ 2.76
RABEPK-202ENST00000373538 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
RABEPK-202ENST00000373538 TOPBP1Q92547 1522 aa32.26■■■□□ 2.75
RABEPK-202ENST00000373538 THOC2Q8NI27 1593 aaKnown RBP32.23■■■□□ 2.75
RABEPK-202ENST00000373538 WDR62O43379 1518 aa32.18■■■□□ 2.74
RABEPK-202ENST00000373538 FGD5Q6ZNL6 1462 aa32.11■■■□□ 2.73
RABEPK-202ENST00000373538 POLA1P09884 1462 aaPredicted RBP32.05■■■□□ 2.72
RABEPK-202ENST00000373538 CUX2O14529 1486 aa31.93■■■□□ 2.7
RABEPK-202ENST00000373538 RAD54L2Q9Y4B4 1467 aa31.93■■■□□ 2.7
RABEPK-202ENST00000373538 SOGA1O94964 1423 aa31.91■■■□□ 2.7
RABEPK-202ENST00000373538 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
RABEPK-202ENST00000373538 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
RABEPK-202ENST00000373538 ABCA10Q8WWZ4 1543 aa31.83■■■□□ 2.69
RABEPK-202ENST00000373538 RUSC2Q8N2Y8 1516 aa31.8■■■□□ 2.68
RABEPK-202ENST00000373538 IFT140Q96RY7 1462 aa31.79■■■□□ 2.68
RABEPK-202ENST00000373538 KIF27Q86VH2 1401 aa31.7■■■□□ 2.66
RABEPK-202ENST00000373538 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
RABEPK-202ENST00000373538 EEA1Q15075 1411 aa31.67■■■□□ 2.66
RABEPK-202ENST00000373538 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
RABEPK-202ENST00000373538 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
RABEPK-202ENST00000373538 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
RABEPK-202ENST00000373538 AQRO60306 1485 aaKnown RBP eCLIP31.57■■■□□ 2.65
RABEPK-202ENST00000373538 GAPVD1Q14C86 1478 aa31.56■■■□□ 2.64
RABEPK-202ENST00000373538 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
RABEPK-202ENST00000373538 CSRNP3Q8WYN3 585 aa31.54■■■□□ 2.64
RABEPK-202ENST00000373538 IGF1RP08069 1367 aa31.5■■■□□ 2.63
RABEPK-202ENST00000373538 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
RABEPK-202ENST00000373538 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
RABEPK-202ENST00000373538 GRIN2BQ13224 1484 aa31.42■■■□□ 2.62
RABEPK-202ENST00000373538 PRXQ9BXM0 1461 aa31.37■■■□□ 2.61
RABEPK-202ENST00000373538 CUL7Q14999 1698 aa31.33■■■□□ 2.61
RABEPK-202ENST00000373538 KIF21BO75037 1637 aa31.33■■■□□ 2.61
RABEPK-202ENST00000373538 CARMIL1Q5VZK9 1371 aa31.31■■■□□ 2.6
RABEPK-202ENST00000373538 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
RABEPK-202ENST00000373538 LOC105371045A0A1W2PR82 267 aa31.27■■■□□ 2.6
RABEPK-202ENST00000373538 ADAMTS12P58397 1594 aa31.27■■■□□ 2.6
RABEPK-202ENST00000373538 RAPGEF2Q9Y4G8 1499 aa31.26■■■□□ 2.59
RABEPK-202ENST00000373538 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
RABEPK-202ENST00000373538 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
RABEPK-202ENST00000373538 FHAD1B1AJZ9 1412 aa31.21■■■□□ 2.59
RABEPK-202ENST00000373538 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
RABEPK-202ENST00000373538 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
RABEPK-202ENST00000373538 GRIN2AQ12879 1464 aa31.04■■■□□ 2.56
RABEPK-202ENST00000373538 UBTFP17480 764 aaKnown RBP31.02■■■□□ 2.56
RABEPK-202ENST00000373538 CHMP7Q8WUX9 453 aaPredicted RBP30.99■■■□□ 2.55
RABEPK-202ENST00000373538 TNIKQ9UKE5 1360 aa30.99■■■□□ 2.55
RABEPK-202ENST00000373538 CHD1O14646 1710 aa30.98■■■□□ 2.55
RABEPK-202ENST00000373538 FBLN2P98095 1184 aa30.95■■■□□ 2.55
RABEPK-202ENST00000373538 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms