RNA–Protein interactions for RNA: ENST00000420557.2

LINC00574-201, long intergenic non-protein coding RNA 574, humanhuman

TSL 2 BASIC

Gene LINC00574, Length 2,318 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574-201ENST00000420557 NISCHQ9Y2I1 1504 aa39.45■■■■□ 3.91
LINC00574-201ENST00000420557 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
LINC00574-201ENST00000420557 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
LINC00574-201ENST00000420557 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
LINC00574-201ENST00000420557 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
LINC00574-201ENST00000420557 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
LINC00574-201ENST00000420557 SUPT5HO00267 1087 aaKnown RBP31.98■■■□□ 2.71
LINC00574-201ENST00000420557 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
LINC00574-201ENST00000420557 ABCC9O60706 1549 aa31.72■■■□□ 2.67
LINC00574-201ENST00000420557 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
LINC00574-201ENST00000420557 NACADO15069 1562 aa31.46■■■□□ 2.63
LINC00574-201ENST00000420557 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
LINC00574-201ENST00000420557 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
LINC00574-201ENST00000420557 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
LINC00574-201ENST00000420557 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
LINC00574-201ENST00000420557 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
LINC00574-201ENST00000420557 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
LINC00574-201ENST00000420557 WIZO95785 1651 aa30.39■■■□□ 2.46
LINC00574-201ENST00000420557 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
LINC00574-201ENST00000420557 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
LINC00574-201ENST00000420557 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
LINC00574-201ENST00000420557 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
LINC00574-201ENST00000420557 TOP2AP11388 1531 aaKnown RBP29.98■■■□□ 2.39
LINC00574-201ENST00000420557 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
LINC00574-201ENST00000420557 LOC105371045A0A1W2PR82 267 aa29.88■■■□□ 2.37
LINC00574-201ENST00000420557 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
LINC00574-201ENST00000420557 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
LINC00574-201ENST00000420557 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.36
LINC00574-201ENST00000420557 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
LINC00574-201ENST00000420557 FAM9AQ8IZU1 332 aaPredicted RBP29.54■■■□□ 2.32
LINC00574-201ENST00000420557 ATAD2BQ9ULI0 1458 aa29.53■■■□□ 2.32
LINC00574-201ENST00000420557 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
LINC00574-201ENST00000420557 BAZ1BQ9UIG0 1483 aaKnown RBP29.39■■■□□ 2.3
LINC00574-201ENST00000420557 PCGF6Q9BYE7 350 aa29.22■■■□□ 2.27
LINC00574-201ENST00000420557 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
LINC00574-201ENST00000420557 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
LINC00574-201ENST00000420557 HMGXB3Q12766 1538 aa29.08■■■□□ 2.25
LINC00574-201ENST00000420557 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
LINC00574-201ENST00000420557 SOGA1O94964 1423 aa29.04■■■□□ 2.24
LINC00574-201ENST00000420557 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
LINC00574-201ENST00000420557 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
LINC00574-201ENST00000420557 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.22
LINC00574-201ENST00000420557 EEA1Q15075 1411 aa28.89■■■□□ 2.22
LINC00574-201ENST00000420557 HRCP23327 699 aa28.88■■■□□ 2.21
LINC00574-201ENST00000420557 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
LINC00574-201ENST00000420557 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
LINC00574-201ENST00000420557 CFTRP13569 1480 aa28.68■■■□□ 2.18
LINC00574-201ENST00000420557 TNIKQ9UKE5 1360 aa28.66■■■□□ 2.18
LINC00574-201ENST00000420557 BIVM-ERCC5R4GMW8 1640 aa28.65■■■□□ 2.18
LINC00574-201ENST00000420557 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
LINC00574-201ENST00000420557 CEP162Q5TB80 1403 aa28.64■■■□□ 2.18
LINC00574-201ENST00000420557 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
LINC00574-201ENST00000420557 KIF21BO75037 1637 aa28.55■■■□□ 2.16
LINC00574-201ENST00000420557 CUX1P39880 1505 aa28.54■■■□□ 2.16
LINC00574-201ENST00000420557 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
LINC00574-201ENST00000420557 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
LINC00574-201ENST00000420557 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
LINC00574-201ENST00000420557 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
LINC00574-201ENST00000420557 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
LINC00574-201ENST00000420557 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.14
LINC00574-201ENST00000420557 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
LINC00574-201ENST00000420557 CLIP1P30622 1438 aa28.23■■■□□ 2.11
LINC00574-201ENST00000420557 KIF27Q86VH2 1401 aa28.22■■■□□ 2.11
LINC00574-201ENST00000420557 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
LINC00574-201ENST00000420557 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
LINC00574-201ENST00000420557 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
LINC00574-201ENST00000420557 NESP48681 1621 aa28.11■■■□□ 2.09
LINC00574-201ENST00000420557 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
LINC00574-201ENST00000420557 VPS8Q8N3P4 1428 aa28.07■■■□□ 2.08
LINC00574-201ENST00000420557 CUX2O14529 1486 aa28.06■■■□□ 2.08
LINC00574-201ENST00000420557 RANGAP1P46060 587 aaPredicted RBP28.03■■■□□ 2.08
LINC00574-201ENST00000420557 ZEB1P37275 1124 aaPredicted RBP27.98■■■□□ 2.07
LINC00574-201ENST00000420557 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
LINC00574-201ENST00000420557 IGF1RP08069 1367 aa27.96■■■□□ 2.07
LINC00574-201ENST00000420557 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
LINC00574-201ENST00000420557 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.07
LINC00574-201ENST00000420557 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
LINC00574-201ENST00000420557 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
LINC00574-201ENST00000420557 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
LINC00574-201ENST00000420557 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
LINC00574-201ENST00000420557 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
LINC00574-201ENST00000420557 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
LINC00574-201ENST00000420557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
LINC00574-201ENST00000420557 URB2Q14146 1524 aaKnown RBP27.8■■■□□ 2.04
LINC00574-201ENST00000420557 ARHGAP35Q9NRY4 1499 aa27.76■■■□□ 2.04
LINC00574-201ENST00000420557 APLP2Q06481 763 aa27.75■■■□□ 2.03
LINC00574-201ENST00000420557 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
LINC00574-201ENST00000420557 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
LINC00574-201ENST00000420557 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
LINC00574-201ENST00000420557 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
LINC00574-201ENST00000420557 CUL7Q14999 1698 aa27.58■■■□□ 2.01
LINC00574-201ENST00000420557 KANK4Q5T7N3 995 aaPredicted RBP27.56■■■□□ 2
LINC00574-201ENST00000420557 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
LINC00574-201ENST00000420557 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
LINC00574-201ENST00000420557 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■□□□ 1.99
LINC00574-201ENST00000420557 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
LINC00574-201ENST00000420557 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
LINC00574-201ENST00000420557 CTTNBP2Q8WZ74 1663 aa27.42■■□□□ 1.98
LINC00574-201ENST00000420557 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
LINC00574-201ENST00000420557 TIAM1Q13009 1591 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms