RNA–Protein interactions for RNA: ENST00000504452.5

PRDM8-203, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM8, Length 3,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-203ENST00000504452 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
PRDM8-203ENST00000504452 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
PRDM8-203ENST00000504452 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
PRDM8-203ENST00000504452 HRCP23327 699 aa29.57■■■□□ 2.32
PRDM8-203ENST00000504452 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
PRDM8-203ENST00000504452 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
PRDM8-203ENST00000504452 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
PRDM8-203ENST00000504452 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
PRDM8-203ENST00000504452 ZCCHC6Q5VYS8 1495 aaKnown RBP29.14■■■□□ 2.26
PRDM8-203ENST00000504452 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
PRDM8-203ENST00000504452 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
PRDM8-203ENST00000504452 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
PRDM8-203ENST00000504452 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.15
PRDM8-203ENST00000504452 TRIM26Q12899 539 aaPredicted RBP28.48■■■□□ 2.15
PRDM8-203ENST00000504452 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
PRDM8-203ENST00000504452 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
PRDM8-203ENST00000504452 ZEB1P37275 1124 aaPredicted RBP28.09■■■□□ 2.09
PRDM8-203ENST00000504452 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
PRDM8-203ENST00000504452 PELP1Q8IZL8 1130 aaKnown RBP27.81■■■□□ 2.04
PRDM8-203ENST00000504452 SCAF1Q9H7N4 1312 aaKnown RBP27.71■■■□□ 2.03
PRDM8-203ENST00000504452 RSF1Q96T23 1441 aaPredicted RBP27.61■■■□□ 2.01
PRDM8-203ENST00000504452 ABCC9O60706 1549 aa27.58■■■□□ 2.01
PRDM8-203ENST00000504452 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
PRDM8-203ENST00000504452 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
PRDM8-203ENST00000504452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
PRDM8-203ENST00000504452 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
PRDM8-203ENST00000504452 TTBK1Q5TCY1 1321 aaPredicted RBP27.38■■□□□ 1.97
PRDM8-203ENST00000504452 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
PRDM8-203ENST00000504452 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
PRDM8-203ENST00000504452 DIEXFQ68CQ4 756 aaKnown RBP27.15■■□□□ 1.94
PRDM8-203ENST00000504452 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.94
PRDM8-203ENST00000504452 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
PRDM8-203ENST00000504452 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
PRDM8-203ENST00000504452 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
PRDM8-203ENST00000504452 YTHDC1Q96MU7 727 aaKnown RBP26.88■■□□□ 1.89
PRDM8-203ENST00000504452 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
PRDM8-203ENST00000504452 WIZO95785 1651 aa26.76■■□□□ 1.87
PRDM8-203ENST00000504452 ZNF316A6NFI3 1004 aaPredicted RBP26.68■■□□□ 1.86
PRDM8-203ENST00000504452 CEP162Q5TB80 1403 aa26.64■■□□□ 1.85
PRDM8-203ENST00000504452 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
PRDM8-203ENST00000504452 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
PRDM8-203ENST00000504452 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
PRDM8-203ENST00000504452 MYT1Q01538 1121 aa26.55■■□□□ 1.84
PRDM8-203ENST00000504452 NACADO15069 1562 aa26.53■■□□□ 1.84
PRDM8-203ENST00000504452 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
PRDM8-203ENST00000504452 SOGA1O94964 1423 aa26.49■■□□□ 1.83
PRDM8-203ENST00000504452 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
PRDM8-203ENST00000504452 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.83
PRDM8-203ENST00000504452 MIER1Q8N108 512 aa26.45■■□□□ 1.82
PRDM8-203ENST00000504452 TNIKQ9UKE5 1360 aa26.44■■□□□ 1.82
PRDM8-203ENST00000504452 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
PRDM8-203ENST00000504452 APLP2Q06481 763 aa26.36■■□□□ 1.81
PRDM8-203ENST00000504452 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
PRDM8-203ENST00000504452 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
PRDM8-203ENST00000504452 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
PRDM8-203ENST00000504452 EEA1Q15075 1411 aa26.2■■□□□ 1.79
PRDM8-203ENST00000504452 GOLGA3Q08378 1498 aa26.2■■□□□ 1.78
PRDM8-203ENST00000504452 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
PRDM8-203ENST00000504452 CLIP1P30622 1438 aa26.07■■□□□ 1.76
PRDM8-203ENST00000504452 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
PRDM8-203ENST00000504452 PABPN1Q86U42 306 aaKnown RBP eCLIP26■■□□□ 1.75
PRDM8-203ENST00000504452 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
PRDM8-203ENST00000504452 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.74
PRDM8-203ENST00000504452 SUPT16HQ9Y5B9 1047 aaKnown RBP25.81■■□□□ 1.72
PRDM8-203ENST00000504452 ITGAEP38570 1179 aa25.79■■□□□ 1.72
PRDM8-203ENST00000504452 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
PRDM8-203ENST00000504452 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
PRDM8-203ENST00000504452 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
PRDM8-203ENST00000504452 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
PRDM8-203ENST00000504452 KIF21BO75037 1637 aa25.67■■□□□ 1.7
PRDM8-203ENST00000504452 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
PRDM8-203ENST00000504452 BCANQ96GW7 911 aa25.63■■□□□ 1.69
PRDM8-203ENST00000504452 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
PRDM8-203ENST00000504452 TSHZ2Q9NRE2 1034 aa25.53■■□□□ 1.68
PRDM8-203ENST00000504452 KCNH8Q96L42 1107 aa25.51■■□□□ 1.67
PRDM8-203ENST00000504452 UNC13AQ9UPW8 1703 aa25.47■■□□□ 1.67
PRDM8-203ENST00000504452 FKBP8Q14318 412 aa25.41■■□□□ 1.66
PRDM8-203ENST00000504452 DDX10Q13206 875 aaKnown RBP25.4■■□□□ 1.66
PRDM8-203ENST00000504452 ANP32EQ9BTT0 268 aa25.37■■□□□ 1.65
PRDM8-203ENST00000504452 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
PRDM8-203ENST00000504452 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
PRDM8-203ENST00000504452 NEFLP07196 543 aa25.35■■□□□ 1.65
PRDM8-203ENST00000504452 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
PRDM8-203ENST00000504452 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
PRDM8-203ENST00000504452 FAM50AQ14320 339 aaKnown RBP25.29■■□□□ 1.64
PRDM8-203ENST00000504452 HIRIP3Q9BW71 556 aaPredicted RBP25.28■■□□□ 1.64
PRDM8-203ENST00000504452 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
PRDM8-203ENST00000504452 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
PRDM8-203ENST00000504452 SIN3AQ96ST3 1273 aa25.25■■□□□ 1.63
PRDM8-203ENST00000504452 TRIM52Q96A61 297 aa25.24■■□□□ 1.63
PRDM8-203ENST00000504452 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
PRDM8-203ENST00000504452 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
PRDM8-203ENST00000504452 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
PRDM8-203ENST00000504452 TOP2BQ02880 1626 aa25.2■■□□□ 1.62
PRDM8-203ENST00000504452 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
PRDM8-203ENST00000504452 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
PRDM8-203ENST00000504452 ANP32CO43423 234 aa25.13■■□□□ 1.61
PRDM8-203ENST00000504452 P3H3Q8IVL6 736 aa25.11■■□□□ 1.61
PRDM8-203ENST00000504452 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.6
PRDM8-203ENST00000504452 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms