RNA–Protein interactions for RNA: ENST00000196489.3

ZNF416-201, Transcript of zinc finger protein 416, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF416, Length 2,561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF416-201ENST00000196489 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
ZNF416-201ENST00000196489 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
ZNF416-201ENST00000196489 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
ZNF416-201ENST00000196489 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
ZNF416-201ENST00000196489 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
ZNF416-201ENST00000196489 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
ZNF416-201ENST00000196489 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
ZNF416-201ENST00000196489 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
ZNF416-201ENST00000196489 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
ZNF416-201ENST00000196489 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
ZNF416-201ENST00000196489 ABCC9O60706 1549 aa30.1■■■□□ 2.41
ZNF416-201ENST00000196489 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
ZNF416-201ENST00000196489 NACADO15069 1562 aa29.77■■■□□ 2.36
ZNF416-201ENST00000196489 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
ZNF416-201ENST00000196489 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
ZNF416-201ENST00000196489 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
ZNF416-201ENST00000196489 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
ZNF416-201ENST00000196489 PCGF6Q9BYE7 350 aa29.33■■■□□ 2.29
ZNF416-201ENST00000196489 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
ZNF416-201ENST00000196489 WIZO95785 1651 aa29.23■■■□□ 2.27
ZNF416-201ENST00000196489 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
ZNF416-201ENST00000196489 HRCP23327 699 aa29.11■■■□□ 2.25
ZNF416-201ENST00000196489 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
ZNF416-201ENST00000196489 EHMT2Q96KQ7 1210 aa28.97■■■□□ 2.23
ZNF416-201ENST00000196489 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
ZNF416-201ENST00000196489 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
ZNF416-201ENST00000196489 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
ZNF416-201ENST00000196489 TRIM26Q12899 539 aaPredicted RBP28.73■■■□□ 2.19
ZNF416-201ENST00000196489 TOP2AP11388 1531 aaKnown RBP28.71■■■□□ 2.19
ZNF416-201ENST00000196489 PPARGC1BQ86YN6 1023 aaKnown RBP28.67■■■□□ 2.18
ZNF416-201ENST00000196489 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
ZNF416-201ENST00000196489 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
ZNF416-201ENST00000196489 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
ZNF416-201ENST00000196489 SMARCA2P51531 1590 aa28.56■■■□□ 2.16
ZNF416-201ENST00000196489 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
ZNF416-201ENST00000196489 SOGA1O94964 1423 aa28.22■■■□□ 2.11
ZNF416-201ENST00000196489 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
ZNF416-201ENST00000196489 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
ZNF416-201ENST00000196489 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
ZNF416-201ENST00000196489 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
ZNF416-201ENST00000196489 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
ZNF416-201ENST00000196489 CSRNP3Q8WYN3 585 aa28.02■■■□□ 2.08
ZNF416-201ENST00000196489 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
ZNF416-201ENST00000196489 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
ZNF416-201ENST00000196489 UBTFP17480 764 aaKnown RBP27.95■■■□□ 2.06
ZNF416-201ENST00000196489 ZEB1P37275 1124 aaPredicted RBP27.95■■■□□ 2.06
ZNF416-201ENST00000196489 EEA1Q15075 1411 aa27.92■■■□□ 2.06
ZNF416-201ENST00000196489 SYNJ1O43426 1573 aa27.91■■■□□ 2.06
ZNF416-201ENST00000196489 TNIKQ9UKE5 1360 aa27.89■■■□□ 2.05
ZNF416-201ENST00000196489 GOLGA3Q08378 1498 aa27.78■■■□□ 2.04
ZNF416-201ENST00000196489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.73■■■□□ 2.03
ZNF416-201ENST00000196489 CEP164Q9UPV0 1460 aa27.63■■■□□ 2.01
ZNF416-201ENST00000196489 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
ZNF416-201ENST00000196489 NCAPD3P42695 1498 aa27.57■■■□□ 2
ZNF416-201ENST00000196489 KIF21BO75037 1637 aa27.57■■■□□ 2
ZNF416-201ENST00000196489 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
ZNF416-201ENST00000196489 TOP2BQ02880 1626 aa27.53■■■□□ 2
ZNF416-201ENST00000196489 HMGXB3Q12766 1538 aa27.53■■■□□ 2
ZNF416-201ENST00000196489 RAPGEF2Q9Y4G8 1499 aa27.53■■■□□ 2
ZNF416-201ENST00000196489 CLIP1P30622 1438 aa27.49■■□□□ 1.99
ZNF416-201ENST00000196489 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
ZNF416-201ENST00000196489 CUX1P39880 1505 aa27.36■■□□□ 1.97
ZNF416-201ENST00000196489 VPS8Q8N3P4 1428 aa27.31■■□□□ 1.96
ZNF416-201ENST00000196489 CFTRP13569 1480 aa27.31■■□□□ 1.96
ZNF416-201ENST00000196489 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
ZNF416-201ENST00000196489 APLP2Q06481 763 aa27.23■■□□□ 1.95
ZNF416-201ENST00000196489 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
ZNF416-201ENST00000196489 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
ZNF416-201ENST00000196489 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
ZNF416-201ENST00000196489 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
ZNF416-201ENST00000196489 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
ZNF416-201ENST00000196489 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
ZNF416-201ENST00000196489 PRDM2Q13029 1718 aa27.01■■□□□ 1.91
ZNF416-201ENST00000196489 CUX2O14529 1486 aa26.99■■□□□ 1.91
ZNF416-201ENST00000196489 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
ZNF416-201ENST00000196489 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
ZNF416-201ENST00000196489 DIEXFQ68CQ4 756 aaKnown RBP26.92■■□□□ 1.9
ZNF416-201ENST00000196489 IGF1RP08069 1367 aa26.91■■□□□ 1.9
ZNF416-201ENST00000196489 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
ZNF416-201ENST00000196489 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
ZNF416-201ENST00000196489 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
ZNF416-201ENST00000196489 NESP48681 1621 aa26.77■■□□□ 1.88
ZNF416-201ENST00000196489 ZNF316A6NFI3 1004 aaPredicted RBP26.76■■□□□ 1.87
ZNF416-201ENST00000196489 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
ZNF416-201ENST00000196489 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
ZNF416-201ENST00000196489 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
ZNF416-201ENST00000196489 ITGAEP38570 1179 aa26.64■■□□□ 1.85
ZNF416-201ENST00000196489 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
ZNF416-201ENST00000196489 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
ZNF416-201ENST00000196489 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
ZNF416-201ENST00000196489 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
ZNF416-201ENST00000196489 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.85
ZNF416-201ENST00000196489 CCNB3Q8WWL7 1395 aa26.57■■□□□ 1.84
ZNF416-201ENST00000196489 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
ZNF416-201ENST00000196489 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
ZNF416-201ENST00000196489 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
ZNF416-201ENST00000196489 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
ZNF416-201ENST00000196489 ACIN1Q9UKV3 1341 aaKnown RBP26.52■■□□□ 1.84
ZNF416-201ENST00000196489 TIAM1Q13009 1591 aa26.51■■□□□ 1.83
ZNF416-201ENST00000196489 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms