RNA–Protein interactions for RNA: ENST00000420111.6

CSF1-205, Transcript of colony stimulating factor 1, humanhuman

TSL 5 BASIC

Gene CSF1, Length 1,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-205ENST00000420111 NISCHQ9Y2I1 1504 aa48.96■■■■■ 5.43
CSF1-205ENST00000420111 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
CSF1-205ENST00000420111 ABCC9O60706 1549 aa42.84■■■■■ 4.45
CSF1-205ENST00000420111 DCAF8L2P0C7V8 631 aa41.32■■■■■ 4.21
CSF1-205ENST00000420111 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
CSF1-205ENST00000420111 NACADO15069 1562 aa41.03■■■■■ 4.16
CSF1-205ENST00000420111 MYO15BQ96JP2 1530 aa40.7■■■■■ 4.11
CSF1-205ENST00000420111 ZCCHC6Q5VYS8 1495 aaKnown RBP40.7■■■■■ 4.11
CSF1-205ENST00000420111 DCAF1Q9Y4B6 1507 aa40.47■■■■■ 4.07
CSF1-205ENST00000420111 PABPN1Q86U42 306 aaKnown RBP eCLIP40.12■■■■■ 4.01
CSF1-205ENST00000420111 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
CSF1-205ENST00000420111 SCRIBQ14160 1630 aa39.74■■■■□ 3.95
CSF1-205ENST00000420111 BICRAQ9NZM4 1560 aa39.73■■■■□ 3.95
CSF1-205ENST00000420111 DNAJC5BQ9UF47 199 aa39.43■■■■□ 3.9
CSF1-205ENST00000420111 SHROOM4Q9ULL8 1493 aa39.42■■■■□ 3.9
CSF1-205ENST00000420111 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
CSF1-205ENST00000420111 CC2D2AQ9P2K1 1620 aa38.65■■■■□ 3.78
CSF1-205ENST00000420111 CECR2Q9BXF3 1484 aa38.52■■■■□ 3.76
CSF1-205ENST00000420111 BAZ1AQ9NRL2 1556 aaPredicted RBP37.98■■■■□ 3.67
CSF1-205ENST00000420111 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
CSF1-205ENST00000420111 NCAPD3P42695 1498 aa37.89■■■■□ 3.66
CSF1-205ENST00000420111 ATAD2BQ9ULI0 1458 aa37.87■■■■□ 3.65
CSF1-205ENST00000420111 SMARCA2P51531 1590 aa37.84■■■■□ 3.65
CSF1-205ENST00000420111 MROH2BQ7Z745 1585 aa37.71■■■■□ 3.63
CSF1-205ENST00000420111 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
CSF1-205ENST00000420111 BAZ1BQ9UIG0 1483 aaKnown RBP37.6■■■■□ 3.61
CSF1-205ENST00000420111 PEG3Q9GZU2 1588 aa37.56■■■■□ 3.6
CSF1-205ENST00000420111 RSF1Q96T23 1441 aaPredicted RBP37.29■■■■□ 3.56
CSF1-205ENST00000420111 WIZO95785 1651 aa37.25■■■■□ 3.55
CSF1-205ENST00000420111 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
CSF1-205ENST00000420111 NESP48681 1621 aa36.96■■■■□ 3.51
CSF1-205ENST00000420111 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
CSF1-205ENST00000420111 LAMC3Q9Y6N6 1575 aa36.87■■■■□ 3.49
CSF1-205ENST00000420111 CADPSQ9ULU8 1353 aa36.84■■■■□ 3.49
CSF1-205ENST00000420111 PDS5BQ9NTI5 1447 aa36.77■■■■□ 3.48
CSF1-205ENST00000420111 CUX2O14529 1486 aa36.59■■■■□ 3.45
CSF1-205ENST00000420111 CCDC88BA6NC98 1476 aa36.52■■■■□ 3.44
CSF1-205ENST00000420111 CFTRP13569 1480 aa36.51■■■■□ 3.44
CSF1-205ENST00000420111 SUPT5HO00267 1087 aaKnown RBP36.48■■■■□ 3.43
CSF1-205ENST00000420111 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
CSF1-205ENST00000420111 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
CSF1-205ENST00000420111 CEP164Q9UPV0 1460 aa36.36■■■■□ 3.41
CSF1-205ENST00000420111 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.4
CSF1-205ENST00000420111 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
CSF1-205ENST00000420111 WDR62O43379 1518 aa36.1■■■■□ 3.37
CSF1-205ENST00000420111 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
CSF1-205ENST00000420111 URB2Q14146 1524 aaKnown RBP35.94■■■■□ 3.34
CSF1-205ENST00000420111 ABCC8Q09428 1581 aa35.84■■■■□ 3.33
CSF1-205ENST00000420111 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
CSF1-205ENST00000420111 DNAJC5Q9H3Z4 198 aa35.73■■■■□ 3.31
CSF1-205ENST00000420111 DNMBPQ6XZF7 1577 aa35.66■■■■□ 3.3
CSF1-205ENST00000420111 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
CSF1-205ENST00000420111 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
CSF1-205ENST00000420111 SOGA1O94964 1423 aa35.4■■■■□ 3.26
CSF1-205ENST00000420111 CUX1P39880 1505 aa35.37■■■■□ 3.25
CSF1-205ENST00000420111 ZNF608Q9ULD9 1512 aaPredicted RBP35.37■■■■□ 3.25
CSF1-205ENST00000420111 FGD5Q6ZNL6 1462 aa35.33■■■■□ 3.25
CSF1-205ENST00000420111 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
CSF1-205ENST00000420111 TARBP1Q13395 1621 aaKnown RBP35.26■■■■□ 3.24
CSF1-205ENST00000420111 OSCARQ8IYS5 282 aa35.25■■■■□ 3.23
CSF1-205ENST00000420111 AQRO60306 1485 aaKnown RBP eCLIP35.24■■■■□ 3.234e-6■■■■■ 28.3
CSF1-205ENST00000420111 WRNQ14191 1432 aaPredicted RBP eCLIP35.22■■■■□ 3.23
CSF1-205ENST00000420111 TDRD9Q8NDG6 1382 aaKnown RBP35.2■■■■□ 3.23
CSF1-205ENST00000420111 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
CSF1-205ENST00000420111 FBLN2P98095 1184 aa35.06■■■■□ 3.2
CSF1-205ENST00000420111 TOP2BQ02880 1626 aa35.04■■■■□ 3.2
CSF1-205ENST00000420111 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
CSF1-205ENST00000420111 SYNJ1O43426 1573 aa34.98■■■■□ 3.19
CSF1-205ENST00000420111 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
CSF1-205ENST00000420111 ABCA10Q8WWZ4 1543 aa34.97■■■■□ 3.19
CSF1-205ENST00000420111 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
CSF1-205ENST00000420111 GAPVD1Q14C86 1478 aa34.93■■■■□ 3.18
CSF1-205ENST00000420111 CHMP7Q8WUX9 453 aaPredicted RBP34.92■■■■□ 3.18
CSF1-205ENST00000420111 SNAPC4Q5SXM2 1469 aa34.87■■■■□ 3.17
CSF1-205ENST00000420111 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
CSF1-205ENST00000420111 ABCA5Q8WWZ7 1642 aa34.74■■■■□ 3.15
CSF1-205ENST00000420111 CHD1O14646 1710 aa34.72■■■■□ 3.15
CSF1-205ENST00000420111 SYNJ2O15056 1496 aa34.71■■■■□ 3.15
CSF1-205ENST00000420111 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
CSF1-205ENST00000420111 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
CSF1-205ENST00000420111 ERICH3Q5RHP9 1530 aa34.56■■■■□ 3.12
CSF1-205ENST00000420111 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
CSF1-205ENST00000420111 KIF27Q86VH2 1401 aa34.55■■■■□ 3.12
CSF1-205ENST00000420111 GRIN2AQ12879 1464 aa34.45■■■■□ 3.1
CSF1-205ENST00000420111 ADAMTS12P58397 1594 aa34.45■■■■□ 3.1
CSF1-205ENST00000420111 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
CSF1-205ENST00000420111 RIMBP3CA6NJZ7 1639 aa34.41■■■■□ 3.1
CSF1-205ENST00000420111 RIMBP3BA6NNM3 1639 aa34.41■■■■□ 3.1
CSF1-205ENST00000420111 RIMBP3Q9UFD9 1639 aa34.41■■■■□ 3.1
CSF1-205ENST00000420111 IGF1RP08069 1367 aa34.38■■■■□ 3.09
CSF1-205ENST00000420111 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
CSF1-205ENST00000420111 CYB5RLQ6IPT4 315 aa34.36■■■■□ 3.09
CSF1-205ENST00000420111 NUP160Q12769 1436 aa34.28■■■■□ 3.08
CSF1-205ENST00000420111 CARMIL1Q5VZK9 1371 aa34.23■■■■□ 3.07
CSF1-205ENST00000420111 CEP170Q5SW79 1584 aa34.2■■■■□ 3.07
CSF1-205ENST00000420111 CUL7Q14999 1698 aa34.19■■■■□ 3.06
CSF1-205ENST00000420111 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
CSF1-205ENST00000420111 JPH4Q96JJ6 628 aa34.12■■■■□ 3.05
CSF1-205ENST00000420111 RUSC2Q8N2Y8 1516 aa34.05■■■■□ 3.04
CSF1-205ENST00000420111 KIAA0586Q9BVV6 1533 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms