RNA–Protein interactions for RNA: ENST00000562248.1

LINC00304-202, long intergenic non-protein coding RNA 304, humanhuman

TSL 1 (best) BASIC

Gene LINC00304, Length 1,095 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304-202ENST00000562248 NISCHQ9Y2I1 1504 aa49.08■■■■■ 5.45
LINC00304-202ENST00000562248 CCDC180Q9P1Z9 1646 aa43.55■■■■■ 4.56
LINC00304-202ENST00000562248 ABCC9O60706 1549 aa42.74■■■■■ 4.43
LINC00304-202ENST00000562248 DCAF8L2P0C7V8 631 aa41.06■■■■■ 4.16
LINC00304-202ENST00000562248 RB1CC1Q8TDY2 1594 aa41.05■■■■■ 4.16
LINC00304-202ENST00000562248 NACADO15069 1562 aa41.03■■■■■ 4.16
LINC00304-202ENST00000562248 ZCCHC6Q5VYS8 1495 aaKnown RBP40.84■■■■■ 4.13
LINC00304-202ENST00000562248 MYO15BQ96JP2 1530 aa40.8■■■■■ 4.12
LINC00304-202ENST00000562248 DCAF1Q9Y4B6 1507 aa40.6■■■■■ 4.09
LINC00304-202ENST00000562248 UNC13AQ9UPW8 1703 aa40.08■■■■■ 4.01
LINC00304-202ENST00000562248 PABPN1Q86U42 306 aaKnown RBP eCLIP40■■■■□ 3.99
LINC00304-202ENST00000562248 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
LINC00304-202ENST00000562248 SCRIBQ14160 1630 aa39.75■■■■□ 3.95
LINC00304-202ENST00000562248 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
LINC00304-202ENST00000562248 SHROOM4Q9ULL8 1493 aa39.39■■■■□ 3.9
LINC00304-202ENST00000562248 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
LINC00304-202ENST00000562248 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.78
LINC00304-202ENST00000562248 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
LINC00304-202ENST00000562248 SMARCA4P51532 1647 aa38.04■■■■□ 3.68
LINC00304-202ENST00000562248 BAZ1AQ9NRL2 1556 aaPredicted RBP37.99■■■■□ 3.67
LINC00304-202ENST00000562248 NCAPD3P42695 1498 aa37.92■■■■□ 3.66
LINC00304-202ENST00000562248 ATAD2BQ9ULI0 1458 aa37.91■■■■□ 3.66
LINC00304-202ENST00000562248 MROH2BQ7Z745 1585 aa37.83■■■■□ 3.65
LINC00304-202ENST00000562248 SMARCA2P51531 1590 aa37.8■■■■□ 3.64
LINC00304-202ENST00000562248 PEG3Q9GZU2 1588 aa37.69■■■■□ 3.62
LINC00304-202ENST00000562248 HMGXB3Q12766 1538 aa37.64■■■■□ 3.62
LINC00304-202ENST00000562248 BAZ1BQ9UIG0 1483 aaKnown RBP37.54■■■■□ 3.6
LINC00304-202ENST00000562248 RSF1Q96T23 1441 aaPredicted RBP37.41■■■■□ 3.58
LINC00304-202ENST00000562248 WIZO95785 1651 aa37.37■■■■□ 3.57
LINC00304-202ENST00000562248 NESP48681 1621 aa36.99■■■■□ 3.51
LINC00304-202ENST00000562248 TOP2AP11388 1531 aaKnown RBP36.97■■■■□ 3.51
LINC00304-202ENST00000562248 LAMC3Q9Y6N6 1575 aa36.84■■■■□ 3.49
LINC00304-202ENST00000562248 CADPSQ9ULU8 1353 aa36.81■■■■□ 3.48
LINC00304-202ENST00000562248 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
LINC00304-202ENST00000562248 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
LINC00304-202ENST00000562248 CCDC88BA6NC98 1476 aa36.6■■■■□ 3.45
LINC00304-202ENST00000562248 CFTRP13569 1480 aa36.56■■■■□ 3.44
LINC00304-202ENST00000562248 CUX2O14529 1486 aa36.46■■■■□ 3.43
LINC00304-202ENST00000562248 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.43
LINC00304-202ENST00000562248 SUPT5HO00267 1087 aaKnown RBP36.42■■■■□ 3.42
LINC00304-202ENST00000562248 THOC2Q8NI27 1593 aaKnown RBP36.37■■■■□ 3.41
LINC00304-202ENST00000562248 FANCD2Q9BXW9 1451 aa36.34■■■■□ 3.41
LINC00304-202ENST00000562248 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
LINC00304-202ENST00000562248 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
LINC00304-202ENST00000562248 PRDM2Q13029 1718 aa36.12■■■■□ 3.37
LINC00304-202ENST00000562248 WDR62O43379 1518 aa36.12■■■■□ 3.37
LINC00304-202ENST00000562248 URB2Q14146 1524 aaKnown RBP35.99■■■■□ 3.35
LINC00304-202ENST00000562248 TOPBP1Q92547 1522 aa35.76■■■■□ 3.31
LINC00304-202ENST00000562248 ABCC8Q09428 1581 aa35.75■■■■□ 3.31
LINC00304-202ENST00000562248 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
LINC00304-202ENST00000562248 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
LINC00304-202ENST00000562248 DNAJC5Q9H3Z4 198 aa35.51■■■■□ 3.28
LINC00304-202ENST00000562248 CUX1P39880 1505 aa35.48■■■■□ 3.27
LINC00304-202ENST00000562248 POLA1P09884 1462 aaPredicted RBP35.45■■■■□ 3.27
LINC00304-202ENST00000562248 ZNF608Q9ULD9 1512 aaPredicted RBP35.41■■■■□ 3.26
LINC00304-202ENST00000562248 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
LINC00304-202ENST00000562248 FGD5Q6ZNL6 1462 aa35.35■■■■□ 3.25
LINC00304-202ENST00000562248 SOGA1O94964 1423 aa35.34■■■■□ 3.25
LINC00304-202ENST00000562248 RAD54L2Q9Y4B4 1467 aa35.33■■■■□ 3.25
LINC00304-202ENST00000562248 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
LINC00304-202ENST00000562248 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.23
LINC00304-202ENST00000562248 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
LINC00304-202ENST00000562248 TDRD9Q8NDG6 1382 aaKnown RBP35.16■■■■□ 3.22
LINC00304-202ENST00000562248 TOP2BQ02880 1626 aa35.12■■■■□ 3.21
LINC00304-202ENST00000562248 SYNJ1O43426 1573 aa35.11■■■■□ 3.21
LINC00304-202ENST00000562248 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
LINC00304-202ENST00000562248 WDR97A6NE52 1622 aa35.03■■■■□ 3.2
LINC00304-202ENST00000562248 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
LINC00304-202ENST00000562248 ABCA10Q8WWZ4 1543 aa35.02■■■■□ 3.2
LINC00304-202ENST00000562248 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
LINC00304-202ENST00000562248 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
LINC00304-202ENST00000562248 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
LINC00304-202ENST00000562248 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
LINC00304-202ENST00000562248 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
LINC00304-202ENST00000562248 FBLN2P98095 1184 aa34.79■■■■□ 3.16
LINC00304-202ENST00000562248 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
LINC00304-202ENST00000562248 CHD1O14646 1710 aa34.72■■■■□ 3.15
LINC00304-202ENST00000562248 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
LINC00304-202ENST00000562248 SYNJ2O15056 1496 aa34.67■■■■□ 3.14
LINC00304-202ENST00000562248 ERICH3Q5RHP9 1530 aa34.58■■■■□ 3.13
LINC00304-202ENST00000562248 FHAD1B1AJZ9 1412 aa34.51■■■■□ 3.12
LINC00304-202ENST00000562248 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
LINC00304-202ENST00000562248 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
LINC00304-202ENST00000562248 IGF1RP08069 1367 aa34.45■■■■□ 3.11
LINC00304-202ENST00000562248 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
LINC00304-202ENST00000562248 CLASP1Q7Z460 1538 aa34.42■■■■□ 3.1
LINC00304-202ENST00000562248 TRIM41Q8WV44 630 aa34.4■■■■□ 3.1
LINC00304-202ENST00000562248 ARHGEF11O15085 1522 aa34.37■■■■□ 3.09
LINC00304-202ENST00000562248 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
LINC00304-202ENST00000562248 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
LINC00304-202ENST00000562248 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
LINC00304-202ENST00000562248 NUP160Q12769 1436 aa34.32■■■■□ 3.08
LINC00304-202ENST00000562248 CEP170Q5SW79 1584 aa34.26■■■■□ 3.07
LINC00304-202ENST00000562248 RUSC2Q8N2Y8 1516 aa34.22■■■■□ 3.07
LINC00304-202ENST00000562248 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
LINC00304-202ENST00000562248 CUL7Q14999 1698 aa34.19■■■■□ 3.06
LINC00304-202ENST00000562248 CYB5RLQ6IPT4 315 aa34.14■■■■□ 3.06
LINC00304-202ENST00000562248 ARAP1Q96P48 1450 aa34.12■■■■□ 3.05
LINC00304-202ENST00000562248 JPH4Q96JJ6 628 aa34.03■■■■□ 3.04
LINC00304-202ENST00000562248 SHROOM2Q13796 1616 aa34.01■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms