RNA–Protein interactions for RNA: ENST00000388837.6

KRT18-202, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KRT18, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-202ENST00000388837 NISCHQ9Y2I1 1504 aa47.37■■■■■ 5.17
KRT18-202ENST00000388837 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
KRT18-202ENST00000388837 ABCC9O60706 1549 aa40.87■■■■■ 4.13
KRT18-202ENST00000388837 DCAF8L2P0C7V8 631 aa39.55■■■■□ 3.92
KRT18-202ENST00000388837 ZCCHC6Q5VYS8 1495 aaKnown RBP39.53■■■■□ 3.92
KRT18-202ENST00000388837 RB1CC1Q8TDY2 1594 aa39.35■■■■□ 3.89
KRT18-202ENST00000388837 NACADO15069 1562 aa39.34■■■■□ 3.89
KRT18-202ENST00000388837 MYO15BQ96JP2 1530 aa39.1■■■■□ 3.85
KRT18-202ENST00000388837 DCAF1Q9Y4B6 1507 aa39.1■■■■□ 3.85
KRT18-202ENST00000388837 UNC13AQ9UPW8 1703 aa38.68■■■■□ 3.78
KRT18-202ENST00000388837 SCRIBQ14160 1630 aa38.47■■■■□ 3.75
KRT18-202ENST00000388837 PABPN1Q86U42 306 aaKnown RBP eCLIP38.24■■■■□ 3.71
KRT18-202ENST00000388837 BICRAQ9NZM4 1560 aa38.22■■■■□ 3.71
KRT18-202ENST00000388837 SHROOM4Q9ULL8 1493 aa37.78■■■■□ 3.64
KRT18-202ENST00000388837 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
KRT18-202ENST00000388837 EIF4G1Q04637 1599 aaKnown RBP37.17■■■■□ 3.54
KRT18-202ENST00000388837 CC2D2AQ9P2K1 1620 aa36.98■■■■□ 3.51
KRT18-202ENST00000388837 CECR2Q9BXF3 1484 aa36.95■■■■□ 3.51
KRT18-202ENST00000388837 SMARCA4P51532 1647 aa36.75■■■■□ 3.47
KRT18-202ENST00000388837 BAZ1AQ9NRL2 1556 aaPredicted RBP36.68■■■■□ 3.46
KRT18-202ENST00000388837 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
KRT18-202ENST00000388837 ATAD2BQ9ULI0 1458 aa36.4■■■■□ 3.42
KRT18-202ENST00000388837 SMARCA2P51531 1590 aa36.35■■■■□ 3.41
KRT18-202ENST00000388837 PEG3Q9GZU2 1588 aa36.29■■■■□ 3.4
KRT18-202ENST00000388837 WIZO95785 1651 aa36.28■■■■□ 3.4
KRT18-202ENST00000388837 NCAPD3P42695 1498 aa36.27■■■■□ 3.4
KRT18-202ENST00000388837 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
KRT18-202ENST00000388837 HMGXB3Q12766 1538 aa36.16■■■■□ 3.38
KRT18-202ENST00000388837 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
KRT18-202ENST00000388837 TOP2AP11388 1531 aaKnown RBP35.79■■■■□ 3.32
KRT18-202ENST00000388837 SUPT5HO00267 1087 aaKnown RBP35.64■■■■□ 3.3
KRT18-202ENST00000388837 NESP48681 1621 aa35.49■■■■□ 3.27
KRT18-202ENST00000388837 CCDC88BA6NC98 1476 aa35.38■■■■□ 3.25
KRT18-202ENST00000388837 LAMC3Q9Y6N6 1575 aa35.32■■■■□ 3.25
KRT18-202ENST00000388837 CADPSQ9ULU8 1353 aa35.24■■■■□ 3.23
KRT18-202ENST00000388837 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
KRT18-202ENST00000388837 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
KRT18-202ENST00000388837 CFTRP13569 1480 aa35.12■■■■□ 3.21
KRT18-202ENST00000388837 PRDM2Q13029 1718 aa35.05■■■■□ 3.2
KRT18-202ENST00000388837 PDS5BQ9NTI5 1447 aa35.02■■■■□ 3.2
KRT18-202ENST00000388837 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
KRT18-202ENST00000388837 THOC2Q8NI27 1593 aaKnown RBP34.85■■■■□ 3.17
KRT18-202ENST00000388837 CEP164Q9UPV0 1460 aa34.83■■■■□ 3.17
KRT18-202ENST00000388837 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
KRT18-202ENST00000388837 WDR62O43379 1518 aa34.59■■■■□ 3.13
KRT18-202ENST00000388837 URB2Q14146 1524 aaKnown RBP34.58■■■■□ 3.13
KRT18-202ENST00000388837 CUX2O14529 1486 aa34.57■■■■□ 3.12
KRT18-202ENST00000388837 TOPBP1Q92547 1522 aa34.4■■■■□ 3.1
KRT18-202ENST00000388837 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
KRT18-202ENST00000388837 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
KRT18-202ENST00000388837 CUX1P39880 1505 aa34.3■■■■□ 3.08
KRT18-202ENST00000388837 SYNJ1O43426 1573 aa34.14■■■■□ 3.06
KRT18-202ENST00000388837 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
KRT18-202ENST00000388837 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
KRT18-202ENST00000388837 FGD5Q6ZNL6 1462 aa34.12■■■■□ 3.05
KRT18-202ENST00000388837 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
KRT18-202ENST00000388837 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
KRT18-202ENST00000388837 IFT140Q96RY7 1462 aa34.04■■■■□ 3.04
KRT18-202ENST00000388837 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
KRT18-202ENST00000388837 RAD54L2Q9Y4B4 1467 aa34.03■■■■□ 3.04
KRT18-202ENST00000388837 ZNF608Q9ULD9 1512 aaPredicted RBP33.98■■■■□ 3.03
KRT18-202ENST00000388837 SOGA1O94964 1423 aa33.97■■■■□ 3.03
KRT18-202ENST00000388837 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
KRT18-202ENST00000388837 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
KRT18-202ENST00000388837 AQRO60306 1485 aaKnown RBP eCLIP33.8■■■■□ 32e-7■■■■□ 21.9
KRT18-202ENST00000388837 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
KRT18-202ENST00000388837 ABCA10Q8WWZ4 1543 aa33.73■■■□□ 2.99
KRT18-202ENST00000388837 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
KRT18-202ENST00000388837 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
KRT18-202ENST00000388837 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
KRT18-202ENST00000388837 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
KRT18-202ENST00000388837 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
KRT18-202ENST00000388837 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
KRT18-202ENST00000388837 CHD1O14646 1710 aa33.46■■■□□ 2.95
KRT18-202ENST00000388837 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
KRT18-202ENST00000388837 CHIC1Q5VXU3 224 aa33.36■■■□□ 2.93
KRT18-202ENST00000388837 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
KRT18-202ENST00000388837 FBLN2P98095 1184 aa33.35■■■□□ 2.93
KRT18-202ENST00000388837 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
KRT18-202ENST00000388837 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
KRT18-202ENST00000388837 RUSC2Q8N2Y8 1516 aa33.31■■■□□ 2.92
KRT18-202ENST00000388837 SYNJ2O15056 1496 aa33.26■■■□□ 2.92
KRT18-202ENST00000388837 CHMP7Q8WUX9 453 aaPredicted RBP33.22■■■□□ 2.91
KRT18-202ENST00000388837 OSCARQ8IYS5 282 aa33.19■■■□□ 2.9
KRT18-202ENST00000388837 IGF1RP08069 1367 aa33.19■■■□□ 2.9
KRT18-202ENST00000388837 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
KRT18-202ENST00000388837 CUL7Q14999 1698 aa33.15■■■□□ 2.9
KRT18-202ENST00000388837 DNAJC5Q9H3Z4 198 aa33.14■■■□□ 2.9
KRT18-202ENST00000388837 GRIN2AQ12879 1464 aa33.12■■■□□ 2.89
KRT18-202ENST00000388837 CARMIL1Q5VZK9 1371 aa33.01■■■□□ 2.88
KRT18-202ENST00000388837 CEP170Q5SW79 1584 aa33.01■■■□□ 2.87
KRT18-202ENST00000388837 FAM9AQ8IZU1 332 aaPredicted RBP32.98■■■□□ 2.87
KRT18-202ENST00000388837 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
KRT18-202ENST00000388837 NUP160Q12769 1436 aa32.91■■■□□ 2.86
KRT18-202ENST00000388837 EEA1Q15075 1411 aa32.86■■■□□ 2.85
KRT18-202ENST00000388837 RAPGEF2Q9Y4G8 1499 aa32.85■■■□□ 2.85
KRT18-202ENST00000388837 CSRNP3Q8WYN3 585 aa32.84■■■□□ 2.85
KRT18-202ENST00000388837 PRXQ9BXM0 1461 aa32.81■■■□□ 2.84
KRT18-202ENST00000388837 RIMBP3CA6NJZ7 1639 aa32.78■■■□□ 2.84
KRT18-202ENST00000388837 RIMBP3BA6NNM3 1639 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms