Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.83□□□□□ -1.82e-9■■■□□ 18.9
MATR3P43243 SEPT2-233ENST00000473479 659 ntTSL 23.65□□□□□ -1.833e-18■■■□□ 18.9
MATR3P43243 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.994e-6■■■□□ 18.9
MATR3P43243 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.52□□□□□ -2.012e-9■■■□□ 18.9
MATR3P43243 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.245e-7■■■□□ 18.9
MATR3P43243 CCNY-209ENST00000493157 816 ntTSL 518.53■□□□□ 0.561e-6■■■□□ 18.9
MATR3P43243 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.31■□□□□ 0.521e-6■■■□□ 18.9
MATR3P43243 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■■□□ 18.9
MATR3P43243 CCNY-207ENST00000490012 793 ntTSL 316.76■□□□□ 0.271e-6■■■□□ 18.9
MATR3P43243 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.031e-6■■■□□ 18.9
MATR3P43243 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.591e-6■■■□□ 18.9
MATR3P43243 CCNY-208ENST00000492478 809 ntTSL 59.8□□□□□ -0.841e-6■■■□□ 18.9
MATR3P43243 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.928e-7■■■□□ 18.9
MATR3P43243 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.3■□□□□ 0.528e-7■■■□□ 18.9
MATR3P43243 RAB7A-207ENST00000491681 552 ntTSL 25.71□□□□□ -1.58e-7■■■□□ 18.9
MATR3P43243 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.989e-7■■■□□ 18.9
MATR3P43243 SLC22A9-202ENST00000536333 1558 ntTSL 1 (best)8.86□□□□□ -0.999e-7■■■□□ 18.9
MATR3P43243 RALGAPA2-204ENST00000430436 8769 ntTSL 59.86□□□□□ -0.832e-6■■■□□ 18.9
MATR3P43243 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.43■■□□□ 1.342e-6■■■□□ 18.9
MATR3P43243 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC12.68□□□□□ -0.382e-6■■■□□ 18.9
MATR3P43243 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC11.84□□□□□ -0.512e-6■■■□□ 18.9
MATR3P43243 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.31■□□□□ 0.22e-7■■■□□ 18.9
MATR3P43243 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC15.31■□□□□ 0.042e-7■■■□□ 18.9
MATR3P43243 ATP1B3-205ENST00000475483 734 ntTSL 315.57■□□□□ 0.085e-7■■■□□ 18.8
MATR3P43243 ATP1B3-204ENST00000466678 1708 ntTSL 315.26■□□□□ 0.035e-7■■■□□ 18.8
MATR3P43243 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.055e-7■■■□□ 18.8
MATR3P43243 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.45□□□□□ -1.065e-7■■■□□ 18.8
MATR3P43243 ATP1B3-203ENST00000465172 1951 ntTSL 28.03□□□□□ -1.125e-7■■■□□ 18.8
MATR3P43243 ATP1B3-210ENST00000495216 418 ntTSL 32.34□□□□□ -2.035e-7■■■□□ 18.8
MATR3P43243 ATF6B-216ENST00000494022 320 ntTSL 213.66□□□□□ -0.221e-7■■■□□ 18.8
MATR3P43243 TNXB-202ENST00000442721 372 ntTSL 1 (best)12.91□□□□□ -0.341e-7■■■□□ 18.8
MATR3P43243 KLHL14-202ENST00000359358 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.512e-7■■■□□ 18.8
MATR3P43243 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.151e-7■■■□□ 18.8
MATR3P43243 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.211e-7■■■□□ 18.8
MATR3P43243 CEP83-207ENST00000547232 2166 ntTSL 1 (best)13.4□□□□□ -0.261e-7■■■□□ 18.8
MATR3P43243 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.85□□□□□ -1.791e-7■■■□□ 18.8
MATR3P43243 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.681e-6■■■□□ 18.8
MATR3P43243 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)22.57■■□□□ 1.21e-6■■■□□ 18.8
MATR3P43243 ASPH-227ENST00000523897 871 ntTSL 38.17□□□□□ -1.16e-6■■■□□ 18.8
MATR3P43243 ASPH-218ENST00000521499 484 ntTSL 34.83□□□□□ -1.646e-6■■■□□ 18.8
MATR3P43243 NPSR1-AS1-201ENST00000358772 550 ntTSL 1 (best)5.51□□□□□ -1.531e-6■■■□□ 18.8
MATR3P43243 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.37□□□□□ -1.391e-6■■■□□ 18.8
MATR3P43243 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.911e-6■■■□□ 18.8
MATR3P43243 THRB-210ENST00000447414 575 ntTSL 420.82■□□□□ 0.924e-7■■■□□ 18.8
MATR3P43243 THRB-204ENST00000413780 896 ntTSL 319.57■□□□□ 0.724e-7■■■□□ 18.8
MATR3P43243 THRB-212ENST00000453729 703 ntTSL 1 (best)18.74■□□□□ 0.594e-7■■■□□ 18.8
MATR3P43243 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.541e-6■■■□□ 18.8
MATR3P43243 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.482e-6■■■□□ 18.8
MATR3P43243 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.42e-6■■■□□ 18.8
MATR3P43243 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.232e-6■■■□□ 18.8
MATR3P43243 THRB-207ENST00000418247 592 ntTSL 215.18■□□□□ 0.024e-7■■■□□ 18.8
MATR3P43243 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.221e-6■■■□□ 18.8
MATR3P43243 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.394e-7■■■□□ 18.8
MATR3P43243 THRB-208ENST00000428492 539 ntTSL 411.82□□□□□ -0.524e-7■■■□□ 18.8
MATR3P43243 THRB-211ENST00000447875 754 ntTSL 1 (best)10.79□□□□□ -0.684e-7■■■□□ 18.8
MATR3P43243 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.96□□□□□ -0.982e-6■■■□□ 18.8
MATR3P43243 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.984e-7■■■□□ 18.8
MATR3P43243 THRB-209ENST00000431815 568 ntTSL 1 (best)8.78□□□□□ -14e-7■■■□□ 18.8
MATR3P43243 PDK1-209ENST00000466437 599 ntTSL 48.56□□□□□ -1.041e-6■■■□□ 18.8
MATR3P43243 THRB-205ENST00000415021 671 ntTSL 1 (best)7.29□□□□□ -1.244e-7■■■□□ 18.8
MATR3P43243 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.274e-7■■■□□ 18.8
MATR3P43243 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.72□□□□□ -1.332e-6■■■□□ 18.8
MATR3P43243 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.482e-9■■■□□ 18.8
MATR3P43243 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.542e-6■■■□□ 18.8
MATR3P43243 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.44□□□□□ -1.72e-9■■■□□ 18.8
MATR3P43243 ARHGEF12-208ENST00000529970 3786 ntTSL 24.44□□□□□ -1.72e-6■■■□□ 18.8
MATR3P43243 KRR1-205ENST00000551070 673 ntTSL 23.22□□□□□ -1.892e-9■■■□□ 18.8
MATR3P43243 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.06■■□□□ 1.762e-7■■■□□ 18.8
MATR3P43243 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.512e-7■■■□□ 18.8
MATR3P43243 RFWD2-203ENST00000367667 2034 ntTSL 1 (best)11.74□□□□□ -0.532e-7■■■□□ 18.8
MATR3P43243 RFWD2-206ENST00000461830 2131 ntTSL 57.94□□□□□ -1.143e-8■■■□□ 18.8
MATR3P43243 RFWD2-202ENST00000367666 2022 ntTSL 27.44□□□□□ -1.222e-7■■■□□ 18.8
MATR3P43243 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.67□□□□□ -0.862e-17■■■□□ 18.8
MATR3P43243 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.87□□□□□ -0.992e-17■■■□□ 18.8
MATR3P43243 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.42□□□□□ -1.542e-17■■■□□ 18.8
MATR3P43243 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.76■□□□□ 0.911e-6■■■□□ 18.8
MATR3P43243 RICTOR-206ENST00000510711 3126 ntTSL 210.85□□□□□ -0.671e-8■■■□□ 18.8
MATR3P43243 RICTOR-209ENST00000514735 686 ntTSL 38.36□□□□□ -1.071e-8■■■□□ 18.8
MATR3P43243 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)7.33□□□□□ -1.241e-8■■■□□ 18.8
MATR3P43243 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.81□□□□□ -1.81e-8■■■□□ 18.8
MATR3P43243 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)3.02□□□□□ -1.931e-8■■■□□ 18.8
MATR3P43243 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.031e-8■■■□□ 18.8
MATR3P43243 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.892e-6■■■□□ 18.8
MATR3P43243 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.561e-6■■■□□ 18.8
MATR3P43243 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC10.84□□□□□ -0.678e-7■■■□□ 18.8
MATR3P43243 TRIP12-202ENST00000343290 583 ntTSL 320.03■□□□□ 0.89e-7■■■□□ 18.8
MATR3P43243 TRIP12-208ENST00000430954 719 ntTSL 213.6□□□□□ -0.239e-7■■■□□ 18.8
MATR3P43243 TRIP12-209ENST00000435716 603 ntTSL 39.19□□□□□ -0.949e-7■■■□□ 18.8
MATR3P43243 TRIP12-207ENST00000428959 584 ntTSL 39.13□□□□□ -0.959e-7■■■□□ 18.8
MATR3P43243 USP15-216ENST00000550632 728 ntTSL 315.97■□□□□ 0.156e-7■■■□□ 18.8
MATR3P43243 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.416e-7■■■□□ 18.8
MATR3P43243 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.786e-7■■■□□ 18.8
MATR3P43243 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.9□□□□□ -2.112e-6■■■□□ 18.8
MATR3P43243 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.974e-8■■■□□ 18.8
MATR3P43243 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.564e-8■■■□□ 18.8
MATR3P43243 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.162e-6■■■□□ 18.8
MATR3P43243 DCBLD2-202ENST00000326857 3959 ntTSL 1 (best) BASIC12.73□□□□□ -0.372e-6■■■□□ 18.8
MATR3P43243 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.146e-8■■■□□ 18.8
MATR3P43243 WDR4-207ENST00000492742 2205 ntTSL 221.95■■□□□ 1.16e-8■■■□□ 18.8
MATR3P43243 WDR4-205ENST00000476326 1977 ntTSL 1 (best)16.26■□□□□ 0.196e-8■■■□□ 18.8
Retrieved 100 of 16,209 protein–RNA pairs in 149.9 ms