RNA–Protein interactions for RNA: ENST00000551070.5

KRR1-205, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-205ENST00000551070 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
KRR1-205ENST00000551070 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
KRR1-205ENST00000551070 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
KRR1-205ENST00000551070 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
KRR1-205ENST00000551070 FOXD1Q16676 465 aa20.18■□□□□ 0.82
KRR1-205ENST00000551070 MSH5O43196 834 aa19.16■□□□□ 0.66
KRR1-205ENST00000551070 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
KRR1-205ENST00000551070 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
KRR1-205ENST00000551070 PIAS4Q8N2W9 510 aaPredicted RBP18.84■□□□□ 0.61
KRR1-205ENST00000551070 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
KRR1-205ENST00000551070 ADRA2BP18089 450 aa18.52■□□□□ 0.56
KRR1-205ENST00000551070 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
KRR1-205ENST00000551070 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
KRR1-205ENST00000551070 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
KRR1-205ENST00000551070 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
KRR1-205ENST00000551070 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
KRR1-205ENST00000551070 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
KRR1-205ENST00000551070 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
KRR1-205ENST00000551070 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
KRR1-205ENST00000551070 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
KRR1-205ENST00000551070 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
KRR1-205ENST00000551070 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
KRR1-205ENST00000551070 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
KRR1-205ENST00000551070 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
KRR1-205ENST00000551070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.1
KRR1-205ENST00000551070 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
KRR1-205ENST00000551070 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
KRR1-205ENST00000551070 CAPN15O75808 1086 aa15.12■□□□□ 0.01
KRR1-205ENST00000551070 DSG3P32926 999 aa15.09■□□□□ 0.01
KRR1-205ENST00000551070 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
KRR1-205ENST00000551070 APLP2Q06481 763 aa15.02■□□□□ -0
KRR1-205ENST00000551070 KCNA4P22459 653 aa14.95□□□□□ -0.02
KRR1-205ENST00000551070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
KRR1-205ENST00000551070 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
KRR1-205ENST00000551070 POTEHQ6S545 545 aa14.89□□□□□ -0.03
KRR1-205ENST00000551070 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
KRR1-205ENST00000551070 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
KRR1-205ENST00000551070 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
KRR1-205ENST00000551070 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
KRR1-205ENST00000551070 ABCB7O75027 752 aa14.66□□□□□ -0.06
KRR1-205ENST00000551070 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
KRR1-205ENST00000551070 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
KRR1-205ENST00000551070 POLA2Q14181 598 aa14.33□□□□□ -0.12
KRR1-205ENST00000551070 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
KRR1-205ENST00000551070 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
KRR1-205ENST00000551070 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
KRR1-205ENST00000551070 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
KRR1-205ENST00000551070 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
KRR1-205ENST00000551070 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
KRR1-205ENST00000551070 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
KRR1-205ENST00000551070 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
KRR1-205ENST00000551070 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
KRR1-205ENST00000551070 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
KRR1-205ENST00000551070 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
KRR1-205ENST00000551070 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
KRR1-205ENST00000551070 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
KRR1-205ENST00000551070 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
KRR1-205ENST00000551070 ZBTB22O15209 634 aa13.67□□□□□ -0.22
KRR1-205ENST00000551070 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
KRR1-205ENST00000551070 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
KRR1-205ENST00000551070 FBLN2P98095 1184 aa13.66□□□□□ -0.22
KRR1-205ENST00000551070 HAX1O00165 279 aa13.64□□□□□ -0.23
KRR1-205ENST00000551070 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
KRR1-205ENST00000551070 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
KRR1-205ENST00000551070 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
KRR1-205ENST00000551070 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
KRR1-205ENST00000551070 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
KRR1-205ENST00000551070 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
KRR1-205ENST00000551070 EVX2Q03828 476 aa13.31□□□□□ -0.28
KRR1-205ENST00000551070 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
KRR1-205ENST00000551070 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
KRR1-205ENST00000551070 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
KRR1-205ENST00000551070 GABBR2O75899 941 aa13.11□□□□□ -0.31
KRR1-205ENST00000551070 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
KRR1-205ENST00000551070 CLCN6P51797 869 aa13.05□□□□□ -0.32
KRR1-205ENST00000551070 LHX8Q68G74 356 aa12.97□□□□□ -0.33
KRR1-205ENST00000551070 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
KRR1-205ENST00000551070 CD44P16070 742 aaKnown RBP12.96□□□□□ -0.33
KRR1-205ENST00000551070 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
KRR1-205ENST00000551070 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
KRR1-205ENST00000551070 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
KRR1-205ENST00000551070 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
KRR1-205ENST00000551070 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
KRR1-205ENST00000551070 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
KRR1-205ENST00000551070 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
KRR1-205ENST00000551070 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
KRR1-205ENST00000551070 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
KRR1-205ENST00000551070 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
KRR1-205ENST00000551070 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
KRR1-205ENST00000551070 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
KRR1-205ENST00000551070 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
KRR1-205ENST00000551070 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
KRR1-205ENST00000551070 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
KRR1-205ENST00000551070 ASTLQ6HA08 431 aaPredicted RBP12.36□□□□□ -0.43
KRR1-205ENST00000551070 PROM2Q8N271 834 aa12.34□□□□□ -0.43
KRR1-205ENST00000551070 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
KRR1-205ENST00000551070 C7P10643 843 aa12.33□□□□□ -0.44
KRR1-205ENST00000551070 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
KRR1-205ENST00000551070 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
KRR1-205ENST00000551070 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms