RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
KRR1-201ENST00000229214 MYT1Q01538 1121 aa8.57□□□□□ -1.04
KRR1-201ENST00000229214 FAM9AQ8IZU1 332 aaPredicted RBP8.55□□□□□ -1.04
KRR1-201ENST00000229214 YTHDC1Q96MU7 727 aaKnown RBP8.39□□□□□ -1.07
KRR1-201ENST00000229214 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
KRR1-201ENST00000229214 NISCHQ9Y2I1 1504 aa8.23□□□□□ -1.09
KRR1-201ENST00000229214 ZEB1P37275 1124 aaPredicted RBP8.09□□□□□ -1.11
KRR1-201ENST00000229214 APLP2Q06481 763 aa8.06□□□□□ -1.12
KRR1-201ENST00000229214 CENPBP07199 599 aaPredicted RBP7.93□□□□□ -1.14
KRR1-201ENST00000229214 TTBK1Q5TCY1 1321 aaPredicted RBP7.9□□□□□ -1.15
KRR1-201ENST00000229214 ACIN1Q9UKV3 1341 aaKnown RBP7.84□□□□□ -1.15
KRR1-201ENST00000229214 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
KRR1-201ENST00000229214 NEFMP07197 916 aa7.75□□□□□ -1.17
KRR1-201ENST00000229214 CLSPNQ9HAW4 1339 aa7.75□□□□□ -1.17
KRR1-201ENST00000229214 NEFLP07196 543 aa7.75□□□□□ -1.17
KRR1-201ENST00000229214 DCAF8L2P0C7V8 631 aa7.71□□□□□ -1.18
KRR1-201ENST00000229214 MYT1LQ9UL68 1186 aa7.68□□□□□ -1.18
KRR1-201ENST00000229214 DAXXQ9UER7 740 aaPredicted RBP7.65□□□□□ -1.18
KRR1-201ENST00000229214 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
KRR1-201ENST00000229214 ARID4BQ4LE39 1312 aaPredicted RBP7.5□□□□□ -1.21
KRR1-201ENST00000229214 SLC24A1O60721 1099 aa7.46□□□□□ -1.21
KRR1-201ENST00000229214 ANO8Q9HCE9 1232 aaPredicted RBP7.46□□□□□ -1.21
KRR1-201ENST00000229214 GLIPR1L2Q4G1C9 344 aa7.45□□□□□ -1.22
KRR1-201ENST00000229214 ANP32EQ9BTT0 268 aa7.42□□□□□ -1.22
KRR1-201ENST00000229214 RTL5Q5HYW3 569 aaPredicted RBP7.41□□□□□ -1.22
KRR1-201ENST00000229214 CCDC180Q9P1Z9 1646 aa7.39□□□□□ -1.23
KRR1-201ENST00000229214 ANP32BQ92688 251 aaKnown RBP7.37□□□□□ -1.23
KRR1-201ENST00000229214 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
KRR1-201ENST00000229214 SCAF1Q9H7N4 1312 aaKnown RBP7.33□□□□□ -1.24
KRR1-201ENST00000229214 SUPT5HO00267 1087 aaKnown RBP7.33□□□□□ -1.24
KRR1-201ENST00000229214 ZNF316A6NFI3 1004 aaPredicted RBP7.31□□□□□ -1.24
KRR1-201ENST00000229214 SHROOM4Q9ULL8 1493 aa7.31□□□□□ -1.24
KRR1-201ENST00000229214 TRIM41Q8WV44 630 aa7.29□□□□□ -1.24
KRR1-201ENST00000229214 NEUROD1Q13562 356 aa7.29□□□□□ -1.24
KRR1-201ENST00000229214 KAT6BQ8WYB5 2073 aa7.27□□□□□ -1.25
KRR1-201ENST00000229214 CFAP44Q96MT7 982 aa7.25□□□□□ -1.25
KRR1-201ENST00000229214 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
KRR1-201ENST00000229214 TRIM26Q12899 539 aaPredicted RBP7.24□□□□□ -1.25
KRR1-201ENST00000229214 CSRNP3Q8WYN3 585 aa7.23□□□□□ -1.25
KRR1-201ENST00000229214 USP35Q9P2H5 1018 aa7.23□□□□□ -1.25
KRR1-201ENST00000229214 UPF2Q9HAU5 1272 aaKnown RBP7.23□□□□□ -1.25
KRR1-201ENST00000229214 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
KRR1-201ENST00000229214 NCLP19338 710 aaKnown RBP7.22□□□□□ -1.25
KRR1-201ENST00000229214 CHMP4AQ9BY43 222 aa7.21□□□□□ -1.25
KRR1-201ENST00000229214 CHMP4BQ9H444 224 aaKnown RBP7.21□□□□□ -1.26
KRR1-201ENST00000229214 HAP1P54257 671 aaPredicted RBP7.2□□□□□ -1.26
KRR1-201ENST00000229214 EHMT2Q96KQ7 1210 aa7.2□□□□□ -1.26
KRR1-201ENST00000229214 L1TD1Q5T7N2 865 aaKnown RBP7.19□□□□□ -1.26
KRR1-201ENST00000229214 TRIM44Q96DX7 344 aaPredicted RBP7.19□□□□□ -1.26
KRR1-201ENST00000229214 UBTFP17480 764 aaKnown RBP7.18□□□□□ -1.26
KRR1-201ENST00000229214 AEBP2Q6ZN18 517 aaPredicted RBP7.17□□□□□ -1.26
KRR1-201ENST00000229214 HMGB3O15347 200 aaKnown RBP7.16□□□□□ -1.26
KRR1-201ENST00000229214 CDK11BP21127 795 aaKnown RBP7.15□□□□□ -1.26
KRR1-201ENST00000229214 EEA1Q15075 1411 aa7.13□□□□□ -1.27
KRR1-201ENST00000229214 TNNT2P45379 298 aaPredicted RBP7.13□□□□□ -1.27
KRR1-201ENST00000229214 NRDCO43847 1150 aa7.12□□□□□ -1.27
KRR1-201ENST00000229214 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.12□□□□□ -1.27
KRR1-201ENST00000229214 A0A0U1RQG5 324 aaPredicted RBP7.11□□□□□ -1.27
KRR1-201ENST00000229214 ANP32AP39687 249 aaKnown RBP7.09□□□□□ -1.27
KRR1-201ENST00000229214 HMGB1P09429 215 aaKnown RBP7.09□□□□□ -1.27
KRR1-201ENST00000229214 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
KRR1-201ENST00000229214 HMGB2P26583 209 aaKnown RBP7.06□□□□□ -1.28
KRR1-201ENST00000229214 PTMSP20962 102 aa7.06□□□□□ -1.28
KRR1-201ENST00000229214 CDCA8Q53HL2 280 aa7.05□□□□□ -1.28
KRR1-201ENST00000229214 CEP162Q5TB80 1403 aa7.05□□□□□ -1.28
KRR1-201ENST00000229214 CHMP4CQ96CF2 233 aa7.04□□□□□ -1.28
KRR1-201ENST00000229214 GOLGA6L22H0YM25 854 aa7.03□□□□□ -1.28
KRR1-201ENST00000229214 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
KRR1-201ENST00000229214 MS4A1P11836 297 aa7.03□□□□□ -1.28
KRR1-201ENST00000229214 PCGF6Q9BYE7 350 aa7.02□□□□□ -1.29
KRR1-201ENST00000229214 ANP32CO43423 234 aa7.02□□□□□ -1.29
KRR1-201ENST00000229214 HMGB1P1B2RPK0 211 aaPredicted RBP7.02□□□□□ -1.29
KRR1-201ENST00000229214 CCDC34Q96HJ3 373 aa7.02□□□□□ -1.29
KRR1-201ENST00000229214 PKNOX2Q96KN3 472 aa7.02□□□□□ -1.29
KRR1-201ENST00000229214 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
KRR1-201ENST00000229214 GOLGA6L6A8MZA4 724 aa7.01□□□□□ -1.29
KRR1-201ENST00000229214 EIF4G2P78344 907 aaKnown RBP eCLIP7.01□□□□□ -1.29
KRR1-201ENST00000229214 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
KRR1-201ENST00000229214 PNNQ9H307 717 aaKnown RBP6.99□□□□□ -1.29
KRR1-201ENST00000229214 HSP90AA1P07900 732 aaKnown RBP6.98□□□□□ -1.29
KRR1-201ENST00000229214 BECN1Q14457 450 aa6.98□□□□□ -1.29
KRR1-201ENST00000229214 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
KRR1-201ENST00000229214 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
KRR1-201ENST00000229214 MYH16Q9H6N6 1097 aa6.97□□□□□ -1.29
KRR1-201ENST00000229214 PPARGC1BQ86YN6 1023 aaKnown RBP6.96□□□□□ -1.3
KRR1-201ENST00000229214 NPM2Q86SE8 214 aaKnown RBP6.95□□□□□ -1.3
KRR1-201ENST00000229214 ESF1Q9H501 851 aaKnown RBP6.95□□□□□ -1.3
KRR1-201ENST00000229214 NACADO15069 1562 aa6.95□□□□□ -1.3
KRR1-201ENST00000229214 RSF1Q96T23 1441 aaPredicted RBP6.95□□□□□ -1.3
KRR1-201ENST00000229214 ZRSR1Q15695 479 aaKnown RBP6.95□□□□□ -1.3
KRR1-201ENST00000229214 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
KRR1-201ENST00000229214 CASC1Q6TDU7 716 aa6.94□□□□□ -1.3
KRR1-201ENST00000229214 RB1CC1Q8TDY2 1594 aa6.93□□□□□ -1.3
KRR1-201ENST00000229214 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
KRR1-201ENST00000229214 CANXP27824 592 aaKnown RBP6.92□□□□□ -1.3
KRR1-201ENST00000229214 DCAF1Q9Y4B6 1507 aa6.92□□□□□ -1.3
KRR1-201ENST00000229214 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
KRR1-201ENST00000229214 IL27Q8NEV9 243 aa6.9□□□□□ -1.3
KRR1-201ENST00000229214 MYO15BQ96JP2 1530 aa6.9□□□□□ -1.3
KRR1-201ENST00000229214 CHAF1AQ13111 956 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms