RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
KRR1-202ENST00000438169 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
KRR1-202ENST00000438169 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
KRR1-202ENST00000438169 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
KRR1-202ENST00000438169 FOXD1Q16676 465 aa21.71■■□□□ 1.07
KRR1-202ENST00000438169 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
KRR1-202ENST00000438169 MSH5O43196 834 aa20.39■□□□□ 0.85
KRR1-202ENST00000438169 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
KRR1-202ENST00000438169 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
KRR1-202ENST00000438169 ADRA2BP18089 450 aa19.74■□□□□ 0.75
KRR1-202ENST00000438169 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
KRR1-202ENST00000438169 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
KRR1-202ENST00000438169 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
KRR1-202ENST00000438169 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
KRR1-202ENST00000438169 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
KRR1-202ENST00000438169 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
KRR1-202ENST00000438169 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
KRR1-202ENST00000438169 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
KRR1-202ENST00000438169 PPP4R3CPQ6ZMV5 832 aa17.22■□□□□ 0.35
KRR1-202ENST00000438169 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
KRR1-202ENST00000438169 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
KRR1-202ENST00000438169 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
KRR1-202ENST00000438169 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
KRR1-202ENST00000438169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.227e-8■■■■□ 20
KRR1-202ENST00000438169 POTEHQ6S545 545 aa16.38■□□□□ 0.21
KRR1-202ENST00000438169 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
KRR1-202ENST00000438169 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
KRR1-202ENST00000438169 DSG3P32926 999 aa16.15■□□□□ 0.18
KRR1-202ENST00000438169 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
KRR1-202ENST00000438169 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
KRR1-202ENST00000438169 CAPN15O75808 1086 aa16.01■□□□□ 0.15
KRR1-202ENST00000438169 ABCB7O75027 752 aa15.67■□□□□ 0.1
KRR1-202ENST00000438169 SLC4A2P04920 1241 aa15.66■□□□□ 0.1
KRR1-202ENST00000438169 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
KRR1-202ENST00000438169 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
KRR1-202ENST00000438169 APLP2Q06481 763 aa15.35■□□□□ 0.05
KRR1-202ENST00000438169 KCNA4P22459 653 aa15.34■□□□□ 0.05
KRR1-202ENST00000438169 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
KRR1-202ENST00000438169 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
KRR1-202ENST00000438169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
KRR1-202ENST00000438169 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
KRR1-202ENST00000438169 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
KRR1-202ENST00000438169 POLA2Q14181 598 aa15.08■□□□□ 0
KRR1-202ENST00000438169 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
KRR1-202ENST00000438169 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
KRR1-202ENST00000438169 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
KRR1-202ENST00000438169 PIP4P2Q8N4L2 257 aa14.83□□□□□ -0.04
KRR1-202ENST00000438169 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
KRR1-202ENST00000438169 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
KRR1-202ENST00000438169 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
KRR1-202ENST00000438169 HAX1O00165 279 aa14.65□□□□□ -0.06
KRR1-202ENST00000438169 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
KRR1-202ENST00000438169 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
KRR1-202ENST00000438169 EVX2Q03828 476 aa14.62□□□□□ -0.07
KRR1-202ENST00000438169 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
KRR1-202ENST00000438169 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
KRR1-202ENST00000438169 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
KRR1-202ENST00000438169 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
KRR1-202ENST00000438169 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
KRR1-202ENST00000438169 ZBTB22O15209 634 aa14.17□□□□□ -0.14
KRR1-202ENST00000438169 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
KRR1-202ENST00000438169 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
KRR1-202ENST00000438169 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
KRR1-202ENST00000438169 GABBR2O75899 941 aa14.13□□□□□ -0.15
KRR1-202ENST00000438169 LHX8Q68G74 356 aa14.1□□□□□ -0.15
KRR1-202ENST00000438169 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
KRR1-202ENST00000438169 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
KRR1-202ENST00000438169 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
KRR1-202ENST00000438169 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
KRR1-202ENST00000438169 FBLN2P98095 1184 aa13.97□□□□□ -0.17
KRR1-202ENST00000438169 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
KRR1-202ENST00000438169 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
KRR1-202ENST00000438169 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
KRR1-202ENST00000438169 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
KRR1-202ENST00000438169 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
KRR1-202ENST00000438169 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
KRR1-202ENST00000438169 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
KRR1-202ENST00000438169 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
KRR1-202ENST00000438169 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
KRR1-202ENST00000438169 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
KRR1-202ENST00000438169 CLCN6P51797 869 aa13.49□□□□□ -0.25
KRR1-202ENST00000438169 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
KRR1-202ENST00000438169 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
KRR1-202ENST00000438169 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
KRR1-202ENST00000438169 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
KRR1-202ENST00000438169 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
KRR1-202ENST00000438169 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
KRR1-202ENST00000438169 POTEMA6NI47 508 aa13.32□□□□□ -0.28
KRR1-202ENST00000438169 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
KRR1-202ENST00000438169 POTEGQ6S5H5 508 aa13.26□□□□□ -0.29
KRR1-202ENST00000438169 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
KRR1-202ENST00000438169 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
KRR1-202ENST00000438169 LCE2DQ5TA82 110 aaPredicted RBP13.12□□□□□ -0.31
KRR1-202ENST00000438169 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
KRR1-202ENST00000438169 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
KRR1-202ENST00000438169 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
KRR1-202ENST00000438169 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
KRR1-202ENST00000438169 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
KRR1-202ENST00000438169 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
KRR1-202ENST00000438169 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms